../../tmp/servers/virsirnadb/24796867
Result for your query siRNA sequence
RED =100 % Complementary sequence
.=Identical residue
blue alphabets=mismatch
_=Gap


Acc numberStrain nameStartAlignmentEnd% Identity
Queryvirsi16851caggttcggatggttcggg19
AF266287.1 Measles virus strain Edmonston (Moraten vaccine), complete genome 533...................551100
AF266287.1 Measles virus strain Edmonston (Moraten vaccine), complete genome 12788..ac.a.........____1280263
AF266291.1 Measles virus strain Edmonston (Schwarz vaccine), complete genome 533...................551100
AF266291.1 Measles virus strain Edmonston (Schwarz vaccine), complete genome 12788..ac.a.........____1280263
BD137595.1 Mutation causing attenuation of measles virus or human respiratory sy533...................551100
BD137595.1 Mutation causing attenuation of measles virus or human respiratory sy12788..ac.a.........____1280263
S58435.1 nucleocapsid protein...large protein [measles virus, AIK-C, Genomic R533.................a.55194
S58435.1 nucleocapsid protein...large protein [measles virus, AIK-C, Genomic R12788..ac.a.........____1280263
K01711.1MEANPCG Measles virus (strain Edmonston), complete genome 534.................a.55294
K01711.1MEANPCG Measles virus (strain Edmonston), complete genome 12788..ac.a.........____1280263
Z66517.1 Measles virus (strain Edmonston B) RNA (infectious cDNA clone) 533.................a.55194
Z66517.1 Measles virus (strain Edmonston B) RNA (infectious cDNA clone) 12788..ac.a.........____1280263
E04903.1 DNA coding measles vaccine peptide 533.................a.55194
E04903.1 DNA coding measles vaccine peptide 12788..ac.a.........____1280263
AB012948.1 Measles virus genomic RNA, complete sequence of wild-type strain, vir533.................a.55194
AB012948.1 Measles virus genomic RNA, complete sequence of wild-type strain, vir12788..ac.a.........____1280263
AB012949.1 Measles virus genomic RNA, complete sequence of Vero cell-adapted str533.................a.55194
AB012949.1 Measles virus genomic RNA, complete sequence of Vero cell-adapted str12788..ac.a.........____1280263
AF266286.1 Measles virus strain Edmonston (AIK-C vaccine), complete genome 533.................a.55194
AF266286.1 Measles virus strain Edmonston (AIK-C vaccine), complete genome 12788..ac.a.........____1280263
AF266289.1 Measles virus strain Edmonston (Rubeovax vaccine), complete genome 533.................a.55194
AF266289.1 Measles virus strain Edmonston (Rubeovax vaccine), complete genome 12788..ac.a.........____1280263
AF266290.1 Measles virus strain Edmonston (Zagreb vaccine), complete genome 533.................a.55194
AF266290.1 Measles virus strain Edmonston (Zagreb vaccine), complete genome 12788..ac.a.........____1280263
AB046218.1 Measles virus genomic RNA, complete sequence 533.................a.55194
AB046218.1 Measles virus genomic RNA, complete sequence 12788..ac.a.........____1280263
BD137590.1 Mutation causing attenuation of measles virus or human respiratory sy533.................a.55194
BD137590.1 Mutation causing attenuation of measles virus or human respiratory sy12788..ac.a.........____1280263
BD137591.1 Mutation causing attenuation of measles virus or human respiratory sy533.................a.55194
BD137591.1 Mutation causing attenuation of measles virus or human respiratory sy12788..ac.a.........____1280263
BD137594.1 Mutation causing attenuation of measles virus or human respiratory sy533.................a.55194
BD137594.1 Mutation causing attenuation of measles virus or human respiratory sy12788..ac.a.........____1280263
BD137596.1 Mutation causing attenuation of measles virus or human respiratory sy533.................a.55194
BD137596.1 Mutation causing attenuation of measles virus or human respiratory sy12788..ac.a.........____1280263
BD137597.1 Mutation causing attenuation of measles virus or human respiratory sy533.................a.55194
BD137597.1 Mutation causing attenuation of measles virus or human respiratory sy12788..ac.a.........____1280263
AY486083.1 Measles virus strain Edmonston-Zagreb master seed, complete genome 533.................a.55194
AY486083.1 Measles virus strain Edmonston-Zagreb master seed, complete genome 12788..ac.a.........____1280263
AY486084.1 Measles virus strain Edmonston-Zagreb working seed, complete genome 533.................a.55194
AY486084.1 Measles virus strain Edmonston-Zagreb working seed, complete genome 12788..ac.a.........____1280263
AY730614.1 Measles virus strain Leningrad-4, complete genome 533.................a.55194
AY730614.1 Measles virus strain Leningrad-4, complete genome 12788..ac.a.........____1280263
DQ211902.1 Measles virus strain MVi/Zhejiang.CHN/7.05/4, complete genome 533.................a.55194
DQ211902.1 Measles virus strain MVi/Zhejiang.CHN/7.05/4, complete genome 12788..ac.a.........____1280263
DQ345721.1 Measles virus strain CAM-70, complete genome 533.................a.55194
DQ345721.1 Measles virus strain CAM-70, complete genome 12788..ac.a.........____1280263
DQ345722.1 Measles virus strain CAM-70, complete genome 533.................a.55194
DQ345722.1 Measles virus strain CAM-70, complete genome 12788..ac.a.........____1280263
DQ345723.1 Measles virus strain CAM-70, complete genome 533.................a.55194
DQ345723.1 Measles virus strain CAM-70, complete genome 12788..ac.a.........____1280263
AF266288.2 Measles virus strain Edmonston, complete genome 533.................a.55194
AF266288.2 Measles virus strain Edmonston, complete genome 12788..ac.a.........____1280263
AB032167.1 Measles virus genomic RNA, complete sequence of Ichinose-Vero strain,533.....c...........a.55189
AB032167.1 Measles virus genomic RNA, complete sequence of Ichinose-Vero strain,12788..ac.a.........____1280263
BD137592.1 Mutation causing attenuation of measles virus or human respiratory sy533.....c...........a.55189
BD137592.1 Mutation causing attenuation of measles virus or human respiratory sy12788..ac.a.........____1280263
BD137593.1 Mutation causing attenuation of measles virus or human respiratory sy533.....c...........a.55189
BD137593.1 Mutation causing attenuation of measles virus or human respiratory sy12788..ac.a.........____1280263
DQ227321.1 Measles virus isolate WA.USA/17.98, complete genome 533...............t.a.55189
DQ227321.1 Measles virus isolate WA.USA/17.98, complete genome 12788..ac.a.........____1280263
DQ227320.1 Measles virus isolate MVs/Zagreb.CRO/08.03/_SSPE, complete genome 533...............t.a.55189
DQ227320.1 Measles virus isolate MVs/Zagreb.CRO/08.03/_SSPE, complete genome 12788..ac.a.........____1280263
DQ227319.1 Measles virus isolate 97-45881, complete genome 533...............t.a.55189
DQ227319.1 Measles virus isolate 97-45881, complete genome 12788..ac.a.........____1280263
DQ227318.1 Measles virus isolate MVs/Zagreb.CRO/47.02/[D6]_SSPE, complete genome533...............t.a.55189
DQ227318.1 Measles virus isolate MVs/Zagreb.CRO/47.02/[D6]_SSPE, complete genome12788..ac.a.........____1280263
AB254456.1 Measles virus genomic RNA, complete genome, strain: SSPE-Kobe-1 533.....c...........a.55189
AB254456.1 Measles virus genomic RNA, complete genome, strain: SSPE-Kobe-1 12788..ac.a.........____1280263
EF033071.1 Measles virus strain Changchun-47, complete genome 533...............t.a.55189
EF033071.1 Measles virus strain Changchun-47, complete genome 12788..ac.a.........____1280263
EU293548.1 Measles virus isolate D-V/S, complete genome 533.....c...........a.55189
EU293548.1 Measles virus isolate D-V/S, complete genome 12788..ac.a.........____1280263
EU293549.1 Measles virus isolate D-CEF, complete genome 533.....c...........a.55189
EU293549.1 Measles virus isolate D-CEF, complete genome 12788..ac.a.........____1280263
EU293550.1 Measles virus isolate Davis87, complete genome 533.....c...........a.55189
EU293550.1 Measles virus isolate Davis87, complete genome 12788..ac.a.........____1280263
EU293551.1 Measles virus isolate D-VI, complete genome 533.....c...........a.55189
EU293551.1 Measles virus isolate D-VI, complete genome 12788..ac.a.........____1280263
EU293552.1 Measles virus isolate D-VII, complete genome 533.....c...........a.55189
EU293552.1 Measles virus isolate D-VII, complete genome 12788..ac.a.........____1280263
EU435017.1 Measles virus strain Shanghai-191, complete genome 533...............t.a.55189
EU435017.1 Measles virus strain Shanghai-191, complete genome 12788..ac.a.........____1280263
AB481087.1 Measles virus genomic RNA, complete genome, strain: T11wild 533.....c...........a.55189
AB481087.1 Measles virus genomic RNA, complete genome, strain: T11wild 12788..ac.a.........____1280263
AB481088.1 Measles virus genomic RNA, complete genome, strain: T11Ve-23 533.....c...........a.55189
AB481088.1 Measles virus genomic RNA, complete genome, strain: T11Ve-23 12788..ac.a.........____1280263
NC_001498.1 Measles virus, complete genome 533.....c...........a.55189
NC_001498.1 Measles virus, complete genome 12788..ac.a.........____1280263