../../tmp/servers/virsirnadb/2042316804
Result for your query siRNA sequence
RED =100 % Complementary sequence
.=Identical residue
blue alphabets=mismatch
_=Gap


Acc numberStrain nameStartAlignmentEnd% Identity
Queryvirsi20321ccagacacatactcctcag19
L24917.1HRVPP Human rhinovirus type 16 polyprotein gene, complete CDS 2153...................2171100
FJ445158.1 Human rhinovirus 81 isolate F06, complete genome 2145...................2163100
FJ445158.1 Human rhinovirus 81 isolate F06, complete genome 990..........ca.._____100363
FJ445159.1 Human rhinovirus 81 isolate F07, complete genome 2145...................2163100
FJ445159.1 Human rhinovirus 81 isolate F07, complete genome 990..........ca.._____100363
FJ445157.1 Human rhinovirus 81 strain ATCC VR-1191, complete genome 2145...........t...y...216389
FJ445173.1 Human rhinovirus 98 strain ATCC VR-1298, complete genome 2150..............tg...216889
DQ473502.1 Human rhinovirus 76, complete genome 2150..............t.___216578
FJ445182.1 Human rhinovirus 76 strain ATCC VR-1186, complete genome 2149..............t.___216478
DQ473508.1 Human rhinovirus 28, complete genome 2155.............._____216873
DQ473508.1 Human rhinovirus 28, complete genome 6533...........________654357
FJ445147.1 Human rhinovirus 65 strain ATCC VR-1175, complete genome 2154.............._____216773
GU219984.1 Human rhinovirus C strain HRV-C15 isolate W10, complete genome 2369.........a.ac......238784
DQ473495.1 Human rhinovirus 38, complete genome 2141..t...........a.t..215984
DQ473495.1 Human rhinovirus 38, complete genome 983..........ct...____99768
DQ473504.1 Human rhinovirus 88, complete genome 2161..t...........t..t.217984
FJ445121.1 Human rhinovirus 21 strain ATCC VR-1131, complete genome 2148.....t.ag..........216684
FJ445135.1 Human rhinovirus 50 strain ATCC VR-517, complete genome 2132..t...........t.t..215084
FJ445140.1 Human rhinovirus 56 strain ATCC VR-1166, complete genome 2153..t...........ag...217184
FJ445180.1 Human rhinovirus 38 strain ATCC VR-1148, complete genome 2141..t...........a.t..215984
FJ445180.1 Human rhinovirus 38 strain ATCC VR-1148, complete genome 983..........ct...____99768
DQ473490.1 Human rhinovirus 4, complete genome 2144............a..____215873
DQ473490.1 Human rhinovirus 4, complete genome 4294___..........______428552
EF173414.1 Human rhinovirus 11, complete genome 2143.....t.........____215773
EF173414.1 Human rhinovirus 11, complete genome 282...ac........._____26963
FJ445146.1 Human rhinovirus 63 strain ATCC VR-1173, complete genome 991..........c....____100573
FJ445130.1 Human rhinovirus 42 strain ATCC VR-338, complete genome 2151............a._____216468
FJ445137.1 Human rhinovirus 52 isolate F10, complete genome 2149............a._____216268
FJ445129.1 Human rhinovirus 40 strain ATCC VR-341, complete genome 2155............a._____216868
GQ415051.1 Human rhinovirus A isolate hrv-A101, complete genome 988..........c..._____100168
DQ875932.2 Human rhinovirus C strain NY-074 polyprotein gene, complete cds 2346.........c.gg.a....236478
NC_009996.1 Human rhinovirus C, complete genome 1719_..c.a.........a.._173573
EF173423.1 Human rhinovirus 37, complete genome 6424..........t..gg..__644073
EF173420.1 Human rhinovirus 17, complete genome 2143..t.........a..____215768
EF173420.1 Human rhinovirus 17, complete genome 6436.........._________644552
FJ445124.1 Human rhinovirus 26 strain ATCC VR-1136, complete genome 2151..g.........a..____216568
FJ445134.1 Human rhinovirus 49 isolate F04, complete genome 988..........ct...____100268
EF186077.1 Human rhinovirus QPM polyprotein gene, complete cds 1495______.........c...150763
EF582387.1 Human rhinovirus C strain 026, complete genome 1666______.........c...167863
EF173419.1 Human rhinovirus 94, complete genome 5525______..........t..553763
FJ445185.1 Human rhinovirus 94 strain ATCC VR-1295, complete genome 5525______..........t..553763
FJ445112.1 Human rhinovirus 5 strain ATCC VR-485, complete genome 2150...........________216057
FJ445164.1 Human rhinovirus 86 strain ATCC VR-1196, complete genome 2156...........________216657
DQ473492.1 Human rhinovirus 73, complete genome 6540__...........______655057
FJ445117.1 Human rhinovirus 13 isolate F03, complete genome 6541__...........______655157
DQ473489.1 Human rhinovirus 70, complete genome 6440..........tt.gg..._645773
FJ445168.1 Human rhinovirus 91 strain ATCC VR-1292, complete genome 1251_.........t.c.t..t.123473
FJ445168.1 Human rhinovirus 91 strain ATCC VR-1292, complete genome 2145..t.........a._____215863
FJ445168.1 Human rhinovirus 91 strain ATCC VR-1292, complete genome 6438.........._________644752
DQ473500.1 Human rhinovirus 59, complete genome 984..........ca.._____99763
DQ473500.1 Human rhinovirus 59, complete genome 6980__.........._______698952
EF173416.1 Human rhinovirus 24, complete genome 284...ac........._____27163
EF173416.1 Human rhinovirus 24, complete genome 3098__.t.........._____310957
FJ445190.1 Human rhinovirus 24 strain ATCC VR-1134, complete genome 284...ac........._____27163
FJ445190.1 Human rhinovirus 24 strain ATCC VR-1134, complete genome 3098__.t.........._____310957
EU840952.2 Human rhinovirus C strain CL-170085, complete genome 5908____..........a.___589757
EF173421.1 Human rhinovirus 27, complete genome 1269..........c._______128057
FJ445186.1 Human rhinovirus 27 strain ATCC VR-1137, complete genome 1269..........c._______128057
DQ473491.1 Human rhinovirus 41, complete genome 5767____.t..........___577857
DQ473505.1 Human rhinovirus 36, complete genome 2019_____..t.........__203057
DQ473506.1 Human rhinovirus 46, complete genome 2006_____..t.........__201757
FJ445113.1 Human rhinovirus 8 strain ATCC VR-1118, complete genome 6823.........c.._______683457
FJ445170.1 Human rhinovirus 95 strain ATCC VR-1301, complete genome 6825.........c.._______683657
DQ473486.1 Human rhinovirus 6, complete genome 1000.........._________100952
EF173425.1 Human rhinovirus 93, complete genome 1001.........._________101052
FJ445155.1 Human rhinovirus 79 strain ATCC VR-1189, complete genome 997.........._________100652
DQ473497.1 Human rhinovirus 23, complete genome 1330_________..........132152
FJ445120.1 Human rhinovirus 20 strain ATCC VR-1130, complete genome 3016_..........________302552
FJ445150.1 Human rhinovirus 68 strain ATCC VR-1178, complete genome 3017_..........________302652
GQ415052.1 Human rhinovirus A isolate hrv-A101-v1, complete genome 1408_________..........139952
GQ415052.1 Human rhinovirus A isolate hrv-A101-v1, complete genome 6633__.........._______664252