../../tmp/servers/virsirnadb/813269773
Result for your query siRNA sequence
RED =100 % Complementary sequence
.=Identical residue
blue alphabets=mismatch
_=Gap


Acc numberStrain nameStartAlignmentEnd% Identity
Queryvirsi20241cggtaatcttgtacgccag19
L24917.1HRVPP Human rhinovirus type 16 polyprotein gene, complete CDS 63...................81100
DQ473495.1 Human rhinovirus 38, complete genome 63...................81100
DQ473495.1 Human rhinovirus 38, complete genome 5620____.........._____561152
DQ473499.1 Human rhinovirus 44, complete genome 63...................81100
FJ445123.1 Human rhinovirus 25 strain ATCC VR-1135, complete genome 63...................81100
FJ445125.1 Human rhinovirus 29 strain ATCC VR-1139, complete genome 63...................81100
FJ445145.1 Human rhinovirus 62 strain ATCC VR-1172, complete genome 63...................81100
FJ445177.1 Human rhinovirus 9 strain ATCC VR-489, complete genome 63...................81100
FJ445180.1 Human rhinovirus 38 strain ATCC VR-1148, complete genome 63...................81100
FJ445180.1 Human rhinovirus 38 strain ATCC VR-1148, complete genome 5620____.........._____561152
DQ473492.1 Human rhinovirus 73, complete genome 63......c............8194
DQ473498.1 Human rhinovirus 10, complete genome 63.......t...........8194
DQ473500.1 Human rhinovirus 59, complete genome 63.......t...........8194
DQ473502.1 Human rhinovirus 76, complete genome 63.......t...........8194
DQ473505.1 Human rhinovirus 36, complete genome 63......c............8194
DQ473506.1 Human rhinovirus 46, complete genome 63.......t...........8194
DQ473508.1 Human rhinovirus 28, complete genome 63.......t...........8194
DQ473508.1 Human rhinovirus 28, complete genome 3232_..g.........______324357
EF173416.1 Human rhinovirus 24, complete genome 63.......t...........8194
EF173416.1 Human rhinovirus 24, complete genome 2199___..........______220852
FJ445113.1 Human rhinovirus 8 strain ATCC VR-1118, complete genome 63.......t...........8194
FJ445120.1 Human rhinovirus 20 strain ATCC VR-1130, complete genome 63.......t...........8194
FJ445121.1 Human rhinovirus 21 strain ATCC VR-1131, complete genome 63.......t...........8194
FJ445126.1 Human rhinovirus 31 strain ATCC VR-506, complete genome 63.......t...........8194
FJ445127.1 Human rhinovirus 32 strain ATCC VR-1142, complete genome 63.......t...........8194
FJ445127.1 Human rhinovirus 32 strain ATCC VR-1142, complete genome 3212_.........a..______322357
FJ445129.1 Human rhinovirus 40 strain ATCC VR-341, complete genome 63......c............8194
FJ445129.1 Human rhinovirus 40 strain ATCC VR-341, complete genome 5337__.g..........tt...532173
FJ445133.1 Human rhinovirus 47 strain ATCC VR-1157, complete genome 63.......t...........8194
FJ445138.1 Human rhinovirus 54 strain ATCC VR-1164, complete genome 63.......t...........8194
FJ445139.1 Human rhinovirus 54 isolate F05, complete genome 63.......t...........8194
FJ445140.1 Human rhinovirus 56 strain ATCC VR-1166, complete genome 63......c............8194
FJ445141.1 Human rhinovirus 57 isolate fs ship#1-hrv-57, complete genome 62......c............8094
FJ445143.1 Human rhinovirus 60 strain ATCC VR-1473, complete genome 63.......t...........8194
FJ445143.1 Human rhinovirus 60 strain ATCC VR-1473, complete genome 5336____.........._____532752
FJ445146.1 Human rhinovirus 63 strain ATCC VR-1173, complete genome 63.......t...........8194
FJ445148.1 Human rhinovirus 66 strain ATCC VR-1176, complete genome 63.......t...........8194
FJ445150.1 Human rhinovirus 68 strain ATCC VR-1178, complete genome 63.......t...........8194
FJ445154.1 Human rhinovirus 77 strain ATCC VR-1187, complete genome 63.......t...........8194
FJ445154.1 Human rhinovirus 77 strain ATCC VR-1187, complete genome 5333____..........ct...531968
FJ445154.1 Human rhinovirus 77 strain ATCC VR-1187, complete genome 3215_..........._______322557
FJ445157.1 Human rhinovirus 81 strain ATCC VR-1191, complete genome 63.......t...........8194
FJ445157.1 Human rhinovirus 81 strain ATCC VR-1191, complete genome 3204_.........a..______321557
FJ445158.1 Human rhinovirus 81 isolate F06, complete genome 63.......t...........8194
FJ445158.1 Human rhinovirus 81 isolate F06, complete genome 3204_.........a..______321557
FJ445159.1 Human rhinovirus 81 isolate F07, complete genome 63.......t...........8194
FJ445159.1 Human rhinovirus 81 isolate F07, complete genome 3204_.........a..______321557
FJ445163.1 Human rhinovirus 85 strain ATCC VR-1195, complete genome 63......c............8194
FJ445165.1 Human rhinovirus 89 isolate F09, complete genome 63......c............8194
FJ445167.1 Human rhinovirus 90 strain ATCC VR-1291, complete genome 63.......t...........8194
FJ445170.1 Human rhinovirus 95 strain ATCC VR-1301, complete genome 63.......t...........8194
FJ445171.1 Human rhinovirus 96 strain ATCC VR-1296, complete genome 63......c............8194
FJ445173.1 Human rhinovirus 98 strain ATCC VR-1298, complete genome 63.......t...........8194
FJ445175.1 Human rhinovirus 100 strain ATCC VR-1300, complete genome 63.......t...........8194
FJ445178.1 Human rhinovirus 10 strain ATCC VR-1120, complete genome 63.......t...........8194
FJ445182.1 Human rhinovirus 76 strain ATCC VR-1186, complete genome 63.......t...........8194
FJ445190.1 Human rhinovirus 24 strain ATCC VR-1134, complete genome 63.......t...........8194
FJ445190.1 Human rhinovirus 24 strain ATCC VR-1134, complete genome 2199___..........______220852
X02316.1 Human rhinovirus 2, complete sequence 63......ct...........8189
M16248.1HRV89 Human rhinovirus type 89 (HRV89), complete genome 63......ct...........8189
AY751783.1 Human rhinovirus 39, complete genome 63......ct...........8189
DQ473491.1 Human rhinovirus 41, complete genome 63......ct...........8189
DQ473493.1 Human rhinovirus 15, complete genome 63......ct...........8189
DQ473494.1 Human rhinovirus 74, complete genome 63......ct...........8189
DQ473496.1 Human rhinovirus 49, complete genome 63......ct...........8189
DQ473503.1 Human rhinovirus 7, complete genome 62......ct...........8089
FJ445111.1 Human rhinovirus 1 strain ATCC VR-1559, complete genome 63......ct...........8189
FJ445114.1 Human rhinovirus 9 isolate F01, complete genome 63......ct...........8189
FJ445115.1 Human rhinovirus 9 isolate F02, complete genome 63......ct...........8189
FJ445116.1 Human rhinovirus 13 strain ATCC VR-1123, complete genome 63......ct...........8189
FJ445117.1 Human rhinovirus 13 isolate F03, complete genome 63......ct...........8189
FJ445118.1 Human rhinovirus 18 strain ATCC VR-1128, complete genome 63......ct...........8189
FJ445118.1 Human rhinovirus 18 strain ATCC VR-1128, complete genome 5316____..........tt...530268
FJ445128.1 Human rhinovirus 33 strain ATCC VR-330, complete genome 63......ct...........8189
FJ445134.1 Human rhinovirus 49 isolate F04, complete genome 63......ct...........8189
FJ445144.1 Human rhinovirus 61 strain ATCC VR-1171, complete genome 63......ct...........8189
FJ445149.1 Human rhinovirus 67 strain ATCC VR-1177, complete genome 63.......t.........g.8189
FJ445166.1 Human rhinovirus 89 isolate F08, complete genome 63......ct...........8189
FJ445176.1 Human rhinovirus 7 strain ATCC VR-1117, complete genome 63......ct...........8189
FJ445184.1 Human rhinovirus 89 strain ATCC VR-1199, complete genome 63......ct...........8189
NC_001617.1 Human rhinovirus 89, complete genome 63......ct...........8189
D00239.1HRVACG Human rhinovirus 1B, complete genome 63......ct.........._8084
DQ473507.1 Human rhinovirus 53, complete genome 63.....gct...........8184
EF173417.1 Human rhinovirus 64, complete genome 63....g.ct...........8184
FJ445181.1 Human rhinovirus 64 strain ATCC VR-1174, complete genome 63....g.ct...........8184
FJ445156.1 Human rhinovirus 80 strain ATCC VR-1190, complete genome 4658_____.........t..__464757
DQ473487.1 Human rhinovirus 35, complete genome 59.t...cct.........t.7773
DQ473488.1 Human rhinovirus 48, complete genome 59.t...cct.........t.7773
DQ473489.1 Human rhinovirus 70, complete genome 59.t...cct.........t.7773
FJ445162.1 Human rhinovirus 84 strain ATCC VR-1194, complete genome 59.t...cct.........t.7773
FJ445187.1 Human rhinovirus 35 strain ATCC VR-1145, complete genome 59.t...cct.........t.7773
L05355.1HRV14POL Human rhinovirus type 14 polyprotein gene 61__...cct.........t.7768
DQ473485.1 Human rhinovirus 3, complete genome 61__...cct.........t.7768
DQ473486.1 Human rhinovirus 6, complete genome 61__...cct.........t.7768
EF173420.1 Human rhinovirus 17, complete genome 61__...cct.........t.7768
EF173422.1 Human rhinovirus 3, complete genome 61__...cct.........t.7768
EF173423.1 Human rhinovirus 37, complete genome 61__...cct.........t.7768
EF173424.1 Human rhinovirus 52, complete genome 61__...cct.........t.7768
FJ445137.1 Human rhinovirus 52 isolate F10, complete genome 61__...cct.........t.7768
FJ445151.1 Human rhinovirus 69 strain ATCC VR-1179, complete genome 61__...cct.........t.7768
FJ445153.1 Human rhinovirus 72 strain ATCC VR-1182, complete genome 62__...cct.........t.7868
FJ445155.1 Human rhinovirus 79 strain ATCC VR-1189, complete genome 61__...cct.........t.7768
FJ445161.1 Human rhinovirus 83 strain ATCC VR-1193, complete genome 61__...cct.........t.7768
FJ445164.1 Human rhinovirus 86 strain ATCC VR-1196, complete genome 61__...cct.........t.7768
FJ445168.1 Human rhinovirus 91 strain ATCC VR-1292, complete genome 61__...cct.........t.7768
FJ445169.1 Human rhinovirus 92 strain ATCC VR-1293, complete genome 61__...cct.........t.7768
FJ445188.1 Human rhinovirus 52 strain ATCC VR-1162, complete genome 61__...cct.........t.7768
NC_001490.1 Human rhinovirus 14, complete genome 61__...cct.........t.7768
EF173418.1 Human rhinovirus 78, complete genome 4930__..c.gt.c.........494668
FJ445183.1 Human rhinovirus 78 strain ATCC VR-1188, complete genome 4930__..c.gt.c.........494668