../../tmp/servers/virsirnadb/996106274
Result for your query siRNA sequence
RED =100 % Complementary sequence
.=Identical residue
blue alphabets=mismatch
_=Gap


Acc numberStrain nameStartAlignmentEnd% Identity
Queryvirsi20271gatgcagcttccagtggtg19
L24917.1HRVPP Human rhinovirus type 16 polyprotein gene, complete CDS 728...................746100
DQ473505.1 Human rhinovirus 36, complete genome 719...........a.......73794
FJ445150.1 Human rhinovirus 68 strain ATCC VR-1178, complete genome 725...........t.......74394
FJ445142.1 Human rhinovirus 58 strain ATCC VR-1168, complete genome 721...........a....s..73989
FJ445121.1 Human rhinovirus 21 strain ATCC VR-1131, complete genome 717.....c..c..........73589
FJ445133.1 Human rhinovirus 47 strain ATCC VR-1157, complete genome 715.....g..c..........73389
FJ445156.1 Human rhinovirus 80 strain ATCC VR-1190, complete genome 1524__....a..........__151073
FJ445153.1 Human rhinovirus 72 strain ATCC VR-1182, complete genome 924__.........tt...t..90873
FJ445153.1 Human rhinovirus 72 strain ATCC VR-1182, complete genome 507_________..........51652
DQ473498.1 Human rhinovirus 10, complete genome 2427.........gag.c...._244473
DQ473501.1 Human rhinovirus 34, complete genome 2412.........gag.c...._242973
FJ445178.1 Human rhinovirus 10 strain ATCC VR-1120, complete genome 2427.........gag.c...._244473
FJ445189.1 Human rhinovirus 34 strain ATCC VR-1144, complete genome 2412.........gag.c...._242973
DQ473490.1 Human rhinovirus 4, complete genome 156___..ca.a..........17168
FJ445169.1 Human rhinovirus 92 strain ATCC VR-1293, complete genome 920___.........t.c.t..90568
FJ445169.1 Human rhinovirus 92 strain ATCC VR-1293, complete genome 161_______.a..........17257
FJ445172.1 Human rhinovirus 97 strain ATCC VR-1297, complete genome 918___.........t.a.t..90368
FJ445172.1 Human rhinovirus 97 strain ATCC VR-1297, complete genome 160_______.a..........17157
DQ473485.1 Human rhinovirus 3, complete genome 157_______.a..........16857
DQ473486.1 Human rhinovirus 6, complete genome 158_______.a..........16957
EF173421.1 Human rhinovirus 27, complete genome 161_______.a..........17257
EF173422.1 Human rhinovirus 3, complete genome 157_______.a..........16857
EF173423.1 Human rhinovirus 37, complete genome 159_______.a..........17057
EF173425.1 Human rhinovirus 93, complete genome 160_______.a..........17157
EF173425.1 Human rhinovirus 93, complete genome 4218______..........___420952
FJ445155.1 Human rhinovirus 79 strain ATCC VR-1189, complete genome 157_______.a..........16857
FJ445186.1 Human rhinovirus 27 strain ATCC VR-1137, complete genome 161_______.a..........17257
GU219984.1 Human rhinovirus C strain HRV-C15 isolate W10, complete genome 1055___..........______104652
DQ473499.1 Human rhinovirus 44, complete genome 1954_____..........____194552
FJ445125.1 Human rhinovirus 29 strain ATCC VR-1139, complete genome 1954_____..........____194552
FJ445175.1 Human rhinovirus 100 strain ATCC VR-1300, complete genome 1950_____..........____194152
FJ445174.1 Human rhinovirus 99 strain ATCC VR-1299, complete genome 159_..a.ca.a........._17568
DQ473494.1 Human rhinovirus 74, complete genome 2420.........gaa.c...__243668
DQ473502.1 Human rhinovirus 76, complete genome 2429.........gag.c...__244568
DQ473510.1 Human rhinovirus 75, complete genome 2427.........gaa.c...__244368
FJ445128.1 Human rhinovirus 33 strain ATCC VR-330, complete genome 2429.........gag.c...__244568
FJ445131.1 Human rhinovirus 43 strain ATCC VR-1153, complete genome 2423.........gaa.c...__243968
FJ445132.1 Human rhinovirus 45 strain ATCC VR-1155, complete genome 2419.........gaa.c...__243568
FJ445135.1 Human rhinovirus 50 strain ATCC VR-517, complete genome 2411.........gaa.c...__242768
FJ445141.1 Human rhinovirus 57 isolate fs ship#1-hrv-57, complete genome 2424.........gag.c...__244068
FJ445157.1 Human rhinovirus 81 strain ATCC VR-1191, complete genome 2424.........gaa.c...__244068
FJ445159.1 Human rhinovirus 81 isolate F07, complete genome 2424.........gaa.c...__244068
FJ445182.1 Human rhinovirus 76 strain ATCC VR-1186, complete genome 2428.........gag.c...__244468