../../tmp/servers/virsirnadb/1154355497
Result for your query siRNA sequence
RED =100 % Complementary sequence
.=Identical residue
blue alphabets=mismatch
_=Gap


Acc numberStrain nameStartAlignmentEnd% Identity
Queryvirsi12601gcaaccttggtcatcaaca19
AF177911.1 Coxsackievirus A16 polyprotein gene, complete cds 5687...................5705100
AY790926.1 Human coxsackievirus A16 strain shzh00-1, complete genome 5687...................5705100
EU262658.1 Human coxsackievirus A16 strain shzh05-1, complete genome 5687...................5705100
HQ269389.1 Human coxsackievirus A16 isolate XM-CA16-3560, complete genome 5688...................5706100
FJ198212.1 Human coxsackievirus A16 strain GZ08, complete genome 5687.........a.........570594
GQ279368.1 Human coxsackievirus A16 strain SZ/HK08-3, complete genome 5687.........a.........570594
GQ279371.1 Human coxsackievirus A16 strain SZ/HK08-7, complete genome 5687.................t.570594
HQ423141.1 Human coxsackievirus A16 strain KMM/08, complete genome 5687.........a.........570594
AB426610.1 Human enterovirus 79 genomic RNA, complete genome, strain: NH95-0601 6193..........a.....___620878
U22521.1ETU22521 Human enterovirus 71 polyprotein gene, complete cds 5685.....tc.a..........570384
AY773285.1 Human enterovirus 90 isolate F950027, complete genome 5690..c...c.t..........570884
AY773285.1 Human enterovirus 90 isolate F950027, complete genome 2222___............____223363
AY773285.1 Human enterovirus 90 isolate F950027, complete genome 3487.........tg...tc...346978
AB204852.1 Human enterovirus 71 genomic RNA, complete genome, sub_strain:BrCr-TR5685.....tc.a..........570384
AB204853.1 Human enterovirus 71 genomic RNA, complete genome, sub_strain:BrCr-ts5685.....tc.a..........570384
AB192877.1 Human enterovirus 90 genomic RNA, complete genome 5691..t...c.t..........570984
GU434678.1 Human enterovirus 71 strain EV71-Hubei-09-China, complete genome 5685.....tc.a..........570384
AY697460.1 Human enterovirus 90 polyprotein gene, complete cds 5691..c..tc.c..........570978
AF119795.2 Enterovirus 71 strain TW/2272/98 polyprotein gene, complete cds 1631___...........a.t._161768
AF136379.1 Enterovirus 71 isolate NCKU9822 polyprotein mRNA, complete cds 1633___...........a.t._161968
AF119796.3 Enterovirus 71 strain TW/2086/98 polyprotein gene, complete cds 1631___...........a.t._161768
AF176044.1 Enterovirus 71 polyprotein gene, complete cds 1634___...........a.t._162068
AF304457.1 Enterovirus 71 strain Tainan/5746/98 polyprotein mRNA, complete cds 1633___...........a.t._161968
AF304458.1 Enterovirus 71 strain Tainan/4643/98 polyprotein mRNA, complete cds 1633___...........a.t._161968
AF304459.1 Enterovirus 71 strain Tainan/6092/98 polyprotein mRNA, complete cds 1633___...........a.t._161968
DQ060149.1 Human enterovirus 71 strain pinf7-54A from Taiwan, complete genome 1633___...........a.t._161968
DQ341357.1 Human enterovirus 71 isolate 7F-AUS-6-99, complete genome 1632___...........a.t._161868
DQ381846.1 Human enterovirus 71 strain 6F/AUS/6/99, complete genome 1632___...........a.t._161868
FJ172159.1 Human enterovirus 71 isolate NUH0075/SIN/08, complete genome 1593___...........a.t._157968
AB575941.1 Human enterovirus 71 gene for polyprotein, complete cds, isolate: 2481571___...........a.t._155768
AB575942.1 Human enterovirus 71 gene for polyprotein, complete cds, isolate: 3691566___...........a.t._155268
AB575948.1 Human enterovirus 71 gene for polyprotein, complete cds, isolate: 1011589___...........a.t._157568
AY302544.1 Human echovirus 19 strain Burke complete genome 1312...........g.______130063
DQ341359.1 Human enterovirus 71 isolate S10862-SAR-98, complete genome 3480..........g..______346863
AM396584.1 Human enterovirus 71 gene for polyprotein, genomic RNA, isolate ENT/P3479..........g..______346763
AM396585.1 Human enterovirus 71 gene for polyprotein, genomic RNA, isolate ENT/P3479..........g..______346763
X67706.1 Coxsackievirus B5 complete genome 5957________...........596757
AY896762.1 Human enterovirus B strain CBV3-11059-99 from Uzbekistan polyprotein 5936________...........594657
AY843302.1 Human enterovirus 77 strain USA/TX97-10394, complete genome 5978________...........598857
EU147493.1 Human coxsackievirus B1 isolate CVB1Nm polyprotein gene, complete cds2918...........________290857
AB501329.1 Human echovirus 13 gene for polyprotein, complete cds, strain: 2002-25966________...........597657
AB501330.1 Human echovirus 13 gene for polyprotein, complete cds, strain: 2002-25966________...........597657
AB501331.1 Human echovirus 13 gene for polyprotein, complete cds, strain: I5(1)-5966________...........597657
AB501332.1 Human echovirus 13 gene for polyprotein, complete cds, strain: S3(1)-5966________...........597657
HM777023.1 Human echovirus 18 isolate Kor05-ECV18-054cn, complete genome 5969________...........597957
AY421762.1 Human coxsackievirus A4 strain High Point, complete genome 5216_..........._______520657
AB575911.1 Human enterovirus 71 gene for polyprotein, complete cds, isolate: 1005126_..........._______511657
AB575912.1 Human enterovirus 71 gene for polyprotein, complete cds, isolate: 1085140_..........._______513057
AB575936.1 Human enterovirus 71 gene for polyprotein, complete cds, isolate: 9614388_____...........___439857