../../tmp/servers/virsirnadb/113619486
Result for your query siRNA sequence
RED =100 % Complementary sequence
.=Identical residue
blue alphabets=mismatch
_=Gap


Acc numberStrain nameStartAlignmentEnd% Identity
Queryvirsi19431gccgattcatggtcgctct19
S58435.1 nucleocapsid protein...large protein [measles virus, AIK-C, Genomic R796...................814100
S58435.1 nucleocapsid protein...large protein [measles virus, AIK-C, Genomic R7091_..t..gt.a.........710873
K01711.1MEANPCG Measles virus (strain Edmonston), complete genome 797...................815100
K01711.1MEANPCG Measles virus (strain Edmonston), complete genome 7091_..t..gt.a.........710873
Z66517.1 Measles virus (strain Edmonston B) RNA (infectious cDNA clone) 796...................814100
Z66517.1 Measles virus (strain Edmonston B) RNA (infectious cDNA clone) 7091_..t..gt.a.........710873
E04903.1 DNA coding measles vaccine peptide 796...................814100
E04903.1 DNA coding measles vaccine peptide 7091_..t..gt.a.........710873
AF266286.1 Measles virus strain Edmonston (AIK-C vaccine), complete genome 796...................814100
AF266286.1 Measles virus strain Edmonston (AIK-C vaccine), complete genome 7091_..t..gt.a.........710873
AF266287.1 Measles virus strain Edmonston (Moraten vaccine), complete genome 796...................814100
AF266287.1 Measles virus strain Edmonston (Moraten vaccine), complete genome 7091_..t..gt.a.........710873
AF266289.1 Measles virus strain Edmonston (Rubeovax vaccine), complete genome 796...................814100
AF266289.1 Measles virus strain Edmonston (Rubeovax vaccine), complete genome 7091_..t..gt.a.........710873
AF266290.1 Measles virus strain Edmonston (Zagreb vaccine), complete genome 796...................814100
AF266290.1 Measles virus strain Edmonston (Zagreb vaccine), complete genome 7091_..t..gt.a.........710873
AF266291.1 Measles virus strain Edmonston (Schwarz vaccine), complete genome 796...................814100
AF266291.1 Measles virus strain Edmonston (Schwarz vaccine), complete genome 7091_..t..gt.a.........710873
AB046218.1 Measles virus genomic RNA, complete sequence 796...................814100
AB046218.1 Measles virus genomic RNA, complete sequence 7091_..t..gt.a.........710873
BD137590.1 Mutation causing attenuation of measles virus or human respiratory sy796...................814100
BD137590.1 Mutation causing attenuation of measles virus or human respiratory sy7091_..t..gt.a.........710873
BD137591.1 Mutation causing attenuation of measles virus or human respiratory sy796...................814100
BD137591.1 Mutation causing attenuation of measles virus or human respiratory sy7091_..t..gt.a.........710873
BD137592.1 Mutation causing attenuation of measles virus or human respiratory sy796...................814100
BD137592.1 Mutation causing attenuation of measles virus or human respiratory sy7091_..t..gt.a.........710873
BD137594.1 Mutation causing attenuation of measles virus or human respiratory sy796...................814100
BD137594.1 Mutation causing attenuation of measles virus or human respiratory sy7091_..t..gt.a.........710873
BD137595.1 Mutation causing attenuation of measles virus or human respiratory sy796...................814100
BD137595.1 Mutation causing attenuation of measles virus or human respiratory sy7091_..t..gt.a.........710873
BD137596.1 Mutation causing attenuation of measles virus or human respiratory sy796...................814100
BD137596.1 Mutation causing attenuation of measles virus or human respiratory sy7091_..t..gt.a.........710873
BD137597.1 Mutation causing attenuation of measles virus or human respiratory sy796...................814100
BD137597.1 Mutation causing attenuation of measles virus or human respiratory sy7091_..t..gt.a.........710873
AY486083.1 Measles virus strain Edmonston-Zagreb master seed, complete genome 796...................814100
AY486083.1 Measles virus strain Edmonston-Zagreb master seed, complete genome 7091_..t..gt.a.........710873
AY486084.1 Measles virus strain Edmonston-Zagreb working seed, complete genome 796...................814100
AY486084.1 Measles virus strain Edmonston-Zagreb working seed, complete genome 7091_..t..gt.a.........710873
AY730614.1 Measles virus strain Leningrad-4, complete genome 796...................814100
AY730614.1 Measles virus strain Leningrad-4, complete genome 7091_..t..gt.a.........710873
DQ345721.1 Measles virus strain CAM-70, complete genome 796...................814100
DQ345721.1 Measles virus strain CAM-70, complete genome 7091_..t..gt.a.........710873
DQ345722.1 Measles virus strain CAM-70, complete genome 796...................814100
DQ345722.1 Measles virus strain CAM-70, complete genome 7091_..t..gt.a.........710873
DQ345723.1 Measles virus strain CAM-70, complete genome 796...................814100
DQ345723.1 Measles virus strain CAM-70, complete genome 7091_..t..gt.a.........710873
EF033071.1 Measles virus strain Changchun-47, complete genome 796...................814100
EF033071.1 Measles virus strain Changchun-47, complete genome 7091_..t..gt.a.........710873
EU435017.1 Measles virus strain Shanghai-191, complete genome 796...................814100
EU435017.1 Measles virus strain Shanghai-191, complete genome 7091_..t..gt.a.........710873
AF266288.2 Measles virus strain Edmonston, complete genome 796...................814100
AF266288.2 Measles virus strain Edmonston, complete genome 7091_..t..gt.a.........710873
AB012948.1 Measles virus genomic RNA, complete sequence of wild-type strain, vir796.............g.....81494
AB012948.1 Measles virus genomic RNA, complete sequence of wild-type strain, vir7091_..t..gt.a.........710873
AB012949.1 Measles virus genomic RNA, complete sequence of Vero cell-adapted str796.............g.....81494
AB012949.1 Measles virus genomic RNA, complete sequence of Vero cell-adapted str7091_..t..gt.a.........710873
AB032167.1 Measles virus genomic RNA, complete sequence of Ichinose-Vero strain,796.............g.....81494
AB032167.1 Measles virus genomic RNA, complete sequence of Ichinose-Vero strain,7091_..t..gt.a.........710873
BD137593.1 Mutation causing attenuation of measles virus or human respiratory sy796.............g.....81494
BD137593.1 Mutation causing attenuation of measles virus or human respiratory sy7091_..t..gt.a.........710873
DQ211902.1 Measles virus strain MVi/Zhejiang.CHN/7.05/4, complete genome 796.t.................81494
DQ211902.1 Measles virus strain MVi/Zhejiang.CHN/7.05/4, complete genome 7091_..t..gt.a.........710873
DQ227321.1 Measles virus isolate WA.USA/17.98, complete genome 796.................t.81494
DQ227321.1 Measles virus isolate WA.USA/17.98, complete genome 7091_..t..gt.a.........710873
DQ227320.1 Measles virus isolate MVs/Zagreb.CRO/08.03/_SSPE, complete genome 796.................t.81494
DQ227320.1 Measles virus isolate MVs/Zagreb.CRO/08.03/_SSPE, complete genome 7091_..t..gt.a.........710873
DQ227319.1 Measles virus isolate 97-45881, complete genome 796.................t.81494
DQ227319.1 Measles virus isolate 97-45881, complete genome 7091_..t..gt.a.........710873
DQ227318.1 Measles virus isolate MVs/Zagreb.CRO/47.02/[D6]_SSPE, complete genome796.................t.81494
DQ227318.1 Measles virus isolate MVs/Zagreb.CRO/47.02/[D6]_SSPE, complete genome7091_..t..gt.a.........710873
AB254456.1 Measles virus genomic RNA, complete genome, strain: SSPE-Kobe-1 796.............g.....81494
AB254456.1 Measles virus genomic RNA, complete genome, strain: SSPE-Kobe-1 7091_..t..gt.a.........710873
EU293548.1 Measles virus isolate D-V/S, complete genome 796.............g.....81494
EU293548.1 Measles virus isolate D-V/S, complete genome 7091_..t..gt.a.........710873
EU293549.1 Measles virus isolate D-CEF, complete genome 796.............g.....81494
EU293549.1 Measles virus isolate D-CEF, complete genome 7091_..t..gt.a.........710873
EU293550.1 Measles virus isolate Davis87, complete genome 796.............g.....81494
EU293550.1 Measles virus isolate Davis87, complete genome 7091_..t..gt.a.........710873
EU293551.1 Measles virus isolate D-VI, complete genome 796.............g.....81494
EU293551.1 Measles virus isolate D-VI, complete genome 7091_..t..gt.a.........710873
EU293552.1 Measles virus isolate D-VII, complete genome 796.............g.....81494
EU293552.1 Measles virus isolate D-VII, complete genome 7091_..t..gt.a.........710873
AB481087.1 Measles virus genomic RNA, complete genome, strain: T11wild 796.............g.....81494
AB481087.1 Measles virus genomic RNA, complete genome, strain: T11wild 7091_..t..gt.a.........710873
AB481088.1 Measles virus genomic RNA, complete genome, strain: T11Ve-23 796.............g.....81494
AB481088.1 Measles virus genomic RNA, complete genome, strain: T11Ve-23 7091_..t..gt.a.........710873
NC_001498.1 Measles virus, complete genome 796.............g.....81494
NC_001498.1 Measles virus, complete genome 7091_..t..gt.a.........710873