../../tmp/servers/virsirnadb/1636662456
Result for your query siRNA sequence
RED =100 % Complementary sequence
.=Identical residue
blue alphabets=mismatch
_=Gap


Acc numberStrain nameStartAlignmentEnd% Identity
Queryvirsi11941gctccatcttagccctagt19
D85516.1 Hepatitis C virus genomic RNA, complete cds 9442...................9460100
AF011751.1 Hepatitis C virus strain H77 pCV-H77C polyprotein gene, complete cds 9506...................9524100
AF011752.1 Hepatitis C virus strain H77 pCV-H11 polyprotein gene, complete cds 9506...................9524100
AF011753.1 Hepatitis C virus strain H77 pH21 polyprotein gene, complete cds 9506...................9524100
D89815.1 Hepatitis C virus genomic RNA, complete sequence 9455...................9473100
AF054247.1 Hepatitis C virus subtype 1b strain HC-J4 isolate pCV-J4L6S, complete9502...................9520100
AF054248.1 Hepatitis C virus subtype 1b strain HC-J4 isolate pCV-J4L2S, complete9502...................9520100
AF054249.1 Hepatitis C virus subtype 1b strain HC-J4 isolate pCV-J4L4S, complete9503...................9521100
AJ132997.1 Hepatitis C virus, complete genome, isolate HCV-AD78P1 9440...................9458100
AJ238799.1 Hepatitis C virus type 1b complete genome, isolate Con1 9512...................9530100
AF176573.1 Hepatitis C virus subtype 1b strain 274933RU, complete genome 9507...................9525100
AB016785.1 Hepatitis C virus genomic RNA, complete sequence 9445...................9463100
AF169002.1 Hepatitis C virus subtype 2a isolate NDM228, complete genome 9567...................9585100
AF169004.1 Hepatitis C virus subtype 2a isolate G2aK3, complete genome 9560...................9578100
AF169005.1 Hepatitis C virus subtype 2a isolate NDM59, complete genome 9607...................9625100
AF271632.1 Hepatitis C virus subtype 1a clone pHCV-1/SF9 A, complete genome 9525...................9543100
AB030907.1 Hepatitis C virus (isolate JPUT971017) genomic RNA, complete genome 9561...................9579100
AB049088.1 Hepatitis C virus genomic RNA, complete genome, isolate: HCVT094 9523...................9541100
AB049089.1 Hepatitis C virus gene for polyprotein, complete cds, isolate: HCVT109478...................9496100
AB049090.1 Hepatitis C virus gene for polyprotein, complete cds, isolate: HCVT149478...................9496100
AB049091.1 Hepatitis C virus gene for polyprotein, complete cds, isolate: HCVT149454...................9472100
AB049095.1 Hepatitis C virus gene for polyprotein, complete cds, isolate: HCVT169492...................9510100
AB049101.1 Hepatitis C virus gene for polyprotein, complete cds, isolate: HCVT229505...................9523100
AF333324.1 Hepatitis C virus type 1b polyprotein mRNA, complete cds 9494...................9512100
AB047639.1 Hepatitis C virus (isolate JFH-1) genomic RNA, complete genome 9585...................9603100
AB047641.1 Hepatitis C virus gene for polyprotein, complete cds, clone:JCH-2 9566...................9584100
AB047642.1 Hepatitis C virus gene for polyprotein, complete cds, clone:JCH-3 9585...................9603100
AB047643.1 Hepatitis C virus gene for polyprotein, complete cds, clone:JCH-4 9548...................9566100
AB047644.1 Hepatitis C virus gene for polyprotein, complete cds, clone:JCH-5 9598...................9616100
AB047645.1 Hepatitis C virus gene for polyprotein, complete cds, clone:JCH-6 9590...................9608100
AF356827.1 Hepatitis C virus subtype 1b isolate HCV-S1, complete genome 9516...................9534100
AY045702.1 Hepatitis C virus isolate HCR6, complete genome 9518...................9536100
AF139594.2 Hepatitis C virus subtype 1b strain HCV-N, complete genome 9523...................9541100
AB080299.1 Hepatitis C virus genomic RNA, complete genome, isolate:M1LE 9494...................9512100
AY460204.1 Hepatitis C virus from Shanghai, complete genome 9484...................9502100
AY746460.1 Hepatitis C virus genotype 2a polyprotein gene, complete cds 9596...................9614100
D84263.2 Hepatitis C virus (isolate VN235) genomic RNA, complete genome 9522...................9540100
D84264.2 Hepatitis C virus (isolate VN405) genomic RNA, complete genome 9508...................9526100
D84264.2 Hepatitis C virus (isolate VN405) genomic RNA, complete genome 3016___...........t..c.303173
D84265.2 Hepatitis C virus (isolate VN004) genomic RNA, complete genome 9529...................9547100
AB191333.1 Hepatitis C virus genomic RNA, complete genome, strain:0 9494...................9512100
DQ071885.1 Hepatitis C virus subtype 1b polyprotein mRNA, complete cds 9512...................9530100
AJ851228.1 Hepatitis C virus gene for polyprotein, genomic RNA, isolate Equatori9453...................9471100
AB249644.1 Hepatitis C virus subtype 1b genomic RNA, complete genome, hiroshima 9466...................9484100
EF621489.1 Hepatitis C virus subtype 1a strain HC-TN, complete genome 9506...................9524100
EF638081.1 Hepatitis C virus subtype 1b from Hubei, complete genome 9384...................9402100
EU363761.1 Recombinant Hepatitis C virus H77C/JFH1, complete genome 9573...................9591100
AB426117.1 Hepatitis C virus subtype 1b genomic RNA, complete genome, hiroshima 9466...................9484100
AB435162.2 Hepatitis C virus subtype 1b genomic RNA, complete genome, hiroshima 9528...................9546100
AM910652.2 Hepatitis C virus subtype 1g complete genome 9461...................9479100
EU857431.1 Hepatitis C virus subtype 1b isolate Whu, complete genome 9510...................9528100
AB442219.1 Hepatitis C virus subtype 1b genomic RNA, complete genome, clone: 1B-9494...................9512100
AB442220.1 Hepatitis C virus subtype 1b genomic RNA, complete genome, clone: KAH9494...................9512100
AB442221.1 Hepatitis C virus subtype 1b genomic RNA, complete genome, clone: KAH9494...................9512100
AB442222.1 Hepatitis C virus subtype 1b genomic RNA, complete genome, clone: 1B-9497...................9515100
FN435993.1 Hepatitis C virus subtype 1b complete genome, isolate EU1, genomic RN9520...................9538100
AB520610.1 Hepatitis C virus subtype 1a genomic RNA, complete genome, strain: HC9505...................9523100
GU133617.1 Hepatitis C virus subtype 1b, complete genome 9553...................9571100
FN666428.2 Hepatitis C virus gene for polyprotein, genomic RNA, subtype 2q, isol9500...................9518100
D84262.2 Hepatitis C virus (isolate Th580) genomic RNA, complete genome GCCAGC9535...................9553100
D84262.2 Hepatitis C virus (isolate Th580) genomic RNA, complete genome GCCAGC3038___............____304963
AF177036.1 Hepatitis C virus subtype 2a strain HC-J6CH clone pJ6CF, complete gen9618...................9636100
AF009606.1 Hepatitis C virus subtype 1a polyprotein gene, complete cds 9553...................9571100
AF169003.1 Hepatitis C virus subtype 2a isolate G2aK1, complete genome 9600..c................961894
AB047640.1 Hepatitis C virus gene for polyprotein, complete cds, clone:JCH-1 9581................g..959994
AJ278830.1 Hepatitis C virus genomic RNA for polyprotein gene 9517...ggc.............953584
AF054250.1 Hepatitis C virus subtype 1b strain HC-J4, complete genome 9569............_______958063
AF064490.1 Hepatitis C virus (isolate SA13) polyprotein gene, complete cds 9397............_______940863