../../tmp/servers/virsirnadb/662584629
Result for your query siRNA sequence
RED =100 % Complementary sequence
.=Identical residue
blue alphabets=mismatch
_=Gap


Acc numberStrain nameStartAlignmentEnd% Identity
Queryvirsi21901gggttagagtgtataatca19
AJ272108.1 Hepatitis E virus (genotype 4) complete genome sequence 4487...................4505100
EF570133.1 Hepatitis E virus isolate SH-SW-zs1, complete genome 4490...................4508100
GU361892.1 Swine hepatitis E virus strain hb-3, complete genome 4487...................4505100
AY594199.1 Swine hepatitis E virus strain swCH25, complete genome 4495...c...............451394
EU676172.2 Swine hepatitis E virus isolate swGX40, complete genome 4481.....g.............449994
FJ610232.1 Swine hepatitis E virus isolate swCH189, complete genome 4488.................t.450694
GU206559.1 Hepatitis E virus isolate bjsw1, complete genome 4487.................t.450594
GU119961.3 Swine hepatitis E virus isolate CHN-XJ-SW13, complete genome 4488.....g.............450694
AB074915.3 Hepatitis E virus genomic RNA, nearly complete genome, isolate: JAK-S4471..t..g.............448989
AB074917.3 Hepatitis E virus genomic RNA, nearly complete genome, isolate: JKK-S4471...c.g.............448989
AB220972.1 Hepatitis E virus genomic RNA, complete genome, genotype 4, isolate: 4487...c.g.............450589
AB220973.1 Hepatitis E virus genomic RNA, complete genome, genotype 4, isolate: 4487...c.g.............450589
AB220975.1 Hepatitis E virus genomic RNA, complete genome, genotype 4, isolate: 4487...c.g.............450589
AB220976.1 Hepatitis E virus genomic RNA, complete genome, genotype 4, isolate: 4487...c.g.............450589
AB220977.1 Hepatitis E virus genomic RNA, complete genome, genotype 4, isolate: 4487...c.g.............450589
AB220978.1 Hepatitis E virus genomic RNA, complete genome, genotype 4, isolate: 4487...c.g.............450589
AB220979.1 Hepatitis E virus genomic RNA, complete genome, genotype 4, isolate: 4487...c.g.............450589
AB253420.1 Hepatitis E virus genomic RNA, nearly complete genome, isolate:HEVN2 4462.....g...........t.448089
EF077630.1 Hepatitis E virus isolate Ch-S-1, complete genome 4484...c.t.............450289
EF077630.1 Hepatitis E virus isolate Ch-S-1, complete genome 1863__...........______185357
EF077630.1 Hepatitis E virus isolate Ch-S-1, complete genome 706_______..g.........71757
EF077630.1 Hepatitis E virus isolate Ch-S-1, complete genome 2490.........gcat...c..247273
DQ279091.2 Swine hepatitis E virus isolate swDQ, complete genome 4482.....g...........t.450089
AB291959.1 Hepatitis E virus genomic RNA, nearly complete genome, isolate: JTC-K4447...c.g.............446589
AB291964.1 Hepatitis E virus genomic RNA, complete genome, isolate: JYK-Tok03C 4482.....g...........t.450089
AB291965.1 Hepatitis E virus genomic RNA, complete genome, isolate: HRC-HE14C 4487...c.g.............450589
AB291966.1 Hepatitis E virus genomic RNA, complete genome, isolate: JST-KitAsa044487...c.g.............450589
AB291967.1 Hepatitis E virus genomic RNA, complete genome, isolate: JKO-Aba-FH064487...c.g.............450589
AB291968.1 Hepatitis E virus genomic RNA, complete genome, isolate: JMM-Aba06C 4487...c.g.............450589
FJ763142.1 Hepatitis E virus isolate KNIH-hHEV4, complete genome 4484...c.t.............450289
FJ763142.1 Hepatitis E virus isolate KNIH-hHEV4, complete genome 2490.........gcat...c..247273
AB480825.1 Hepatitis E virus genomic RNA, complete genome, genotype 4, isolate: 4487...c.g.............450589
AB108537.1 Hepatitis E virus genomic RNA, nearly complete genome, isolate:CCC2204468..a..g...........t.448684
AY723745.1 Hepatitis E virus isolate IND-SW-00-01, complete genome 4487..cc.............t.450584
AB197673.1 Hepatitis E virus genomic RNA, complete genome, isolate: JKO-ChiSai984485...c.t...........t.450384
AB197674.1 Hepatitis E virus genomic RNA, complete genome, isolate: JYI-ChiSai014484...c.t...........t.450284
AB197674.1 Hepatitis E virus genomic RNA, complete genome, isolate: JYI-ChiSai012490.........gcat...c..247273
AB220974.1 Hepatitis E virus genomic RNA, complete genome, genotype 4, isolate: 4487...c.g...........t.450584
DQ450072.1 Hepatitis E virus isolate swCH31, complete genome 4488...c.g...........t.450684
EU366959.1 Hepatitis E virus isolate swGX32, complete genome 4488...c.t...........t.450684
EU366959.1 Hepatitis E virus isolate swGX32, complete genome 2494.........gcat...c..247673
AB369690.1 Hepatitis E virus genomic RNA, complete genome, genotype 4, strain: E4473...c.g...........t.449184
GU119960.2 Swine hepatitis E virus isolate CHN-XJ-SW33, complete genome 4484...c.t...........t.450284
HM439284.1 Hepatitis E virus isolate EChZ20, complete genome 4478...c.g...........t.449684
HM439284.1 Hepatitis E virus isolate EChZ20, complete genome 1865.c...........______185363
HQ634346.1 Hepatitis E virus strain TW6196E, complete genome 4485...c.t...........t.450384
HQ634346.1 Hepatitis E virus strain TW6196E, complete genome 2491.........gcat...c..247373
AY115488.1 Swine hepatitis E virus strain Arkell, complete genome 2610....c........._____259768
AB290313.1 Hepatitis E virus genomic RNA, complete genome, clone: swMN06-C1056 2594..c.c........._____258163
AB369689.1 Hepatitis E virus genomic RNA, complete genome, genotype 3, strain: E2574.a..c........._____256163
AB369689.1 Hepatitis E virus genomic RNA, complete genome, genotype 3, strain: E2461.........gcgt...c..244373
AB073912.1 Swine hepatitis E virus genomic RNA, complete genome 2481.........gcat...c..246373
AB248521.1 Hepatitis E virus genomic RNA, complete genome, isolate: swJ8-5 6416_______..........__640752
EU360977.1 Hepatitis E virus isolate swX07-E1, complete genome 2135..ta.........ctc...211773
AB481226.1 Swine hepatitis E virus genomic RNA, complete genome, isolate: swJB-E6416_______..........__640752
FJ527832.2 Hepatitis E virus isolate SAAS-JDY5, complete genome 2482.........gcat...c..246473