../../tmp/servers/virsirnadb/1307278390
Result for your query siRNA sequence
RED =100 % Complementary sequence
.=Identical residue
blue alphabets=mismatch
_=Gap


Acc numberStrain nameStartAlignmentEnd% Identity
Queryvirsi21621gtggttggactctttctaa19
D00627.1CXA9CG Human coxsackievirus A9 genomic RNA, complete genome, strain: G7331...................7349100
U57056.1CXU57056 Coxsackievirus B3 Woodruff variant, complete genome 7282...................7300100
AF114383.1 Coxsackievirus B5 strain Faulkner, complete genome 7282...................7300100
AY302541.1 Human echovirus 15 strain CH 96-51 complete genome 7319...................7337100
AY302547.1 Human echovirus 21 strain Farina complete genome 7308...................7326100
AY302548.1 Human echovirus 24 strain DeCamp complete genome 7315...................7333100
AY302544.1 Human echovirus 19 strain Burke complete genome 7316_..................733394
AY302552.1 Human echovirus 29 strain JV-10 complete genome 7310_..................732794
X80059.1 Echo Virus 11 genomic DNA 7321...............t...733994
X84981.1 Echovirus 9 (strain Hill), complete genome 7303............c......732194
AF085363.1 Coxsackievirus B2 strain Ohio-1 polyprotein gene, complete cds 7288...............t...730694
AF081485.1 Coxsackievirus B2 strain Ohio, complete genome 7288...............t...730694
AF029859.2 Echovirus 1 (strain Farouk / ATCC VR-1038) polyprotein precursor, gen7280............c......729894
AY036579.1 Human echovirus 7 strain Wallace polyprotein gene, complete cds 7309...............t...732794
AF317694.1 Human echovirus 18 strain Metcalf polyprotein gene, complete cds 7292............c......731094
AF328683.1 Human coxsackievirus B4 polyprotein-like gene, complete sequence 7274............c......729294
AY186745.1 Human coxsackievirus B1 clone pMP1.24 polyprotein gene, complete cds 7253...............t...727194
AY186746.1 Human coxsackievirus B1 clone pMP1.23 polyprotein gene, complete cds 7253...............t...727194
AY186747.1 Human coxsackievirus B1 clone pAMP2.17 polyprotein gene, complete cds7253...............t...727194
AY186748.1 Human coxsackievirus B1 clone pAMP2.22 polyprotein gene, complete cds7253...............t...727194
AF465516.1 Human echovirus 7 strain Wallace, complete genome 7309...............t...732794
AY302553.1 Human echovirus 3 strain Morrisey complete genome 7310......a............732894
AY302557.1 Human echovirus 4 strain Pesacek complete genome 7276............c......729494
AY302559.1 Human echovirus 7 strain Wallace complete genome 7309...............t...732794
AY843298.1 Human enterovirus 80 strain USA/CA67-10387, complete genome 7310............c......732894
AY843299.1 Human enterovirus 81 strain USA/CA68-10389, complete genome 7297............c......731594
AY843301.1 Human enterovirus 83 strain USA/CA76-10392, complete genome 7276............c......729494
EU147493.1 Human coxsackievirus B1 isolate CVB1Nm polyprotein gene, complete cds7275...............t...729394
AF083069.1 Echovirus 5, complete genome 7316_................g.733389
AF241359.1 Enterovirus CA55-1988, complete genome 7294_..............t...731189
AF524867.1 Human echovirus 9 isolate DM, complete genome 7337_..............t...735489
AF465518.1 Human echovirus 2 strain Cornelis, complete genome 7318_..............t...733589
AY302543.1 Human echovirus 17 strain CHHE-29 complete genome 7299_..............t...731689
AY302545.1 Human echovirus 2 strain Cornelis complete genome 7318_..............t...733589
AY302546.1 Human echovirus 20 strain JV-1 complete genome 7277_...........c......729489
AY302555.1 Human echovirus 32 strain PR-10 complete genome 7303_..............t...732089
AY302556.1 Human echovirus 33 strain Toluca-3 complete genome 7277_...........c......729489
AY302560.1 Enterovirus 69 strain Toluca-1 complete genome 7294_...........c......731189
AY673831.1 Human coxsackievirus B3 strain GA, complete genome 7284_........t.........730189
AY843297.1 Human enterovirus 79 strain USA/CA79-10384, complete genome 7313_...........c......733089
AY843300.1 Human enterovirus 82 strain USA/CA64-10390, complete genome 7316_...........c......733389
X54521.1 Swine vesicular disease virus complete genomic RNA 7282............c..t...730089
D16364.1SVDMPS Swine vesicular disease virus gene for polyprotein, complete cd7283............c..t...730189
U16283.1E6U16283 Echovirus 6 lytic strain, complete genome 7299......a..t.........731789
D00435.1SVDG Swine vesicular disease virus (STRAIN H/3 '76) genomic RNA, compl7283............c..t...730189
AF039205.1 Coxsackievirus B6 strain Schmitt, complete genome 7280.........t..c......729889
AF105342.1 Coxsackievirus B6 strain Schmitt, complete genome 7280.........t..c......729889
AF114384.1 Coxsackievirus B6 strain Schmitt, complete genome 7279.........t..c......729789
AF465517.1 Human echovirus 6 strain Charles, complete genome 7300......a..t.........731889
AY302551.1 Human echovirus 27 strain Bacon complete genome 7293............c..t...731189
AY302558.1 Human echovirus 6 strain D'Amori complete genome 7300......a..t.........731889
AY556057.1 Enterovirus 74 strain USA/CA75-10213, complete genome 7291....c..........t...730989
DQ534205.1 Human echovirus 30 isolate 14916net87, complete genome 7311............c..t...732989
EF174468.1 Human coxsackievirus B2 isolate KOR 04-243, complete genome 7288.........t..c......730689
EF634316.1 Human echovirus 11 strain D207, complete genome 7315.........t..c......733389
EU887278.1 Swine vesicular disease virus SVDV01, complete genome 7283............c..t...730189
EU887279.1 Swine vesicular disease virus SVDV02, complete genome 7283............c..t...730189
EU887280.1 Swine vesicular disease virus SVDV03, complete genome 7283............c..t...730189
HM775882.1 Human echovirus 5 isolate Kor06-ECV5-253cn, complete genome 7311............c..t...732989
HM777023.1 Human echovirus 18 isolate Kor05-ECV18-054cn, complete genome 7295............c..t...731389
AF230973.1AF230973 Enterovirus Yanbian 96-83csf, complete genome 7290_..............t.._730684
AY896762.1 Human enterovirus B strain CBV3-11059-99 from Uzbekistan polyprotein 7263_...c............._727984
M33854.1CXA3CG Coxsackievirus B3 (CVB3) complete genome 7281............c..t.._729884
M16572.1CXA3G Coxsackievirus B3, complete genome 7280............c..t.._729784
M88483.1CXAB3CG Coxsackievirus B3 mRNA, complete genome 7282............c..t.._729984
X92886.1 Echovirus 9 (strain Barty), complete genome 7335_...........c..t...735284
AF231763.1 Coxsackievirus B3 strain 31-1-93, complete genome 7282............c..t.._729984
AF231764.1 Coxsackievirus B3 strain P, complete genome 7282............c..t.._729984
AF231765.1 Coxsackievirus B3 strain PD, complete genome 7282............c..t.._729984
AF524866.1 Human echovirus 9 strain Barty, complete genome 7337_...........c..t...735484
AY302539.1 Human echovirus 13 strain Del Carmen complete genome 7292_...........c..t...730984
AY752945.1 Human coxsackievirus B3 strain 0, complete genome 7282............c..t.._729984
AY752946.1 Human coxsackievirus B3 strain 20, complete genome 7282............c..t.._729984
AY875692.1 Human coxsackievirus B5 isolate 2000/CSF/KOR, complete genome 7286_.........g.c......730384
AY843308.1 Human enterovirus 101 strain CIV03-10361, complete genome 7327............c..t.._734484
FJ000001.1 Human coxsackievirus B3 strain Fuyang19, complete genome 7282_...c..........t...729984
AY752944.2 Human coxsackievirus B3 strain 28, complete genome 7282............c..t.._729984
AJ849942.1 Human echovirus 3 gene for polyprotein, genomic RNA, strain PicoBank/7309............c..t.g.732784
DQ246620.1 Human echovirus 30 strain Echo30/Zhejiang/17/03/CSF, complete genome 7310.........t..c..t...732884
X67706.1 Coxsackievirus B5 complete genome 7284_...........c..t.._730078
EF667343.1 Simian enterovirus 46 strain RNM5, complete genome 7277_...c.t..a.........729478
EF667344.1 Human enterovirus 92 strain RJG7, complete genome 7261_...c.t..a.........727878
AY036578.1 Human echovirus 7 strain UMMC polyprotein gene, complete cds 7308.........t..c..t.g.732678
AY843302.1 Human enterovirus 77 strain USA/TX97-10394, complete genome 7304.........t..c..t.g.732278
EF555645.1 Human enterovirus 102, complete genome 2190.........gg....____217668
AY421763.1 Human coxsackievirus A5 strain Swartz, complete genome 1175____..t..........__116363
FJ914252.2 Human poliovirus 3 strain SWI10947, complete genome 1180____...........____117057