../../tmp/servers/virsirnadb/1249966451
Result for your query siRNA sequence
RED =100 % Complementary sequence
.=Identical residue
blue alphabets=mismatch
_=Gap


Acc numberStrain nameStartAlignmentEnd% Identity
Queryvirsi20481tctacctccatctggtccg19
X04451.1 Hepatitis delta virus (HDV) RNA genome 1353...................1371100
M55042.1HPDAG Hepatitis D virus delta antigen (HDAg) mRNA, complete cds 1354...................1372100
M21012.1HPDGEN Hepatitis delta virus RNA, complete genome 1354...................1372100
M92448.1HPDHDAG Hepatitis D virus, 5' end 1351...................1369100
U81989.1HDU81989 Hepatitis delta virus from Ethiopia genotype IC, complete gen1354...................1372100
AJ000558.1 Hepatitis D Virus complete genome 1353...................1371100
AF098261.1AF098261 Hepatitis D virus from Canada, complete genome 1347...................1365100
AJ307077.1 Hepatitis delta virus complete genome, isolate W5 1354...................1372100
AY648956.1 Hepatitis delta virus isolate TW1435#47, complete genome 1350...................1368100
AY648957.1 Hepatitis delta virus isolate TW5132#24, complete genome 1350...................1368100
AM779576.1 Hepatitis delta virus dFr2544 LHD gene for large HD antigen, genomic 1349...................1367100
AM902163.1 Hepatitis delta virus dFr2067 LHD gene for large HD antigen, genomic 1356...................1374100
AM902168.1 Hepatitis delta virus dFr2045 LHD gene for large HD antigen, genomic 1348...................1366100
AM902172.1 Hepatitis delta virus dFr2264 LHD gene for large HD antigen, genomic 1357...................1375100
AM902173.1 Hepatitis delta virus dFr2380 LHD gene for large HD antigen, genomic 1343...................1361100
AM902175.1 Hepatitis delta virus dFr2406 LHD gene for large HD antigen, genomic 1356...................1374100
AM902177.1 Hepatitis delta virus dFr2012 LHD gene for large HD antigen, genomic 1356...................1374100
AM902181.1 Hepatitis delta virus dFr2210 LHD gene for large HD antigen, genomic 1355...................1373100
AM902174.1 Hepatitis delta virus dFr2404 LHD gene for large HD antigen, genomic 1343...............w...136194
NC_001653.2 Hepatitis delta virus, complete genome 1356.....t.............137494
M84917.1HPDCIAA Hepatitis D virus RNA sequence 1353.................t.137194
L22066.1HPDAGA Hepatitis delta virus antigen gene, complete cds, and autocleav1356.................t.137494
U81988.1HDU81988 Hepatitis delta virus from Somalia genotype IC, complete geno1349....t..............136794
AF104263.1 Hepatitis D virus strain TW2667, complete genome 1351....t..............136994
AF425644.1 Hepatitis D virus isolate TWD2577-66 genotype I, complete genome 1349....t..............136794
AB118837.1 Hepatitis delta virus DNA, complete genome, strain:Miyako(JA-M23) 1356..............a....137494
AB118848.1 Hepatitis delta virus DNA, complete genome, strain:Nagasaki(JA-N1) 1353.................t.137194
AB118849.1 Hepatitis delta virus DNA, complete genome, strain:Nagasaki(JA-N2) 1350.................t.136894
AY633627.1 Hepatitis delta virus isolate IR-1, complete genome 1350....t..............136894
AY648958.1 Hepatitis delta virus isolate TW1573#4, complete genome 1349....t..............136794
AY648959.1 Hepatitis delta virus isolate TW3678#25, complete genome 1349....t..............136794
EF514903.1 Hepatitis delta virus isolate CB, complete genome 1350....t..............136894
EF514904.1 Hepatitis delta virus isolate NK, complete genome 1350....t..............136894
EF514906.1 Hepatitis delta virus isolate SO, complete genome 1350....t..............136894
EF514907.1 Hepatitis delta virus isolate ZA, complete genome 1350....t..............136894
EF514905.2 Hepatitis delta virus isolate OA, complete genome 1350....t..............136894
AM779577.1 Hepatitis delta virus dFr2284 LHD gene for large HD antigen, genomic 1352............c......137094
AM779578.1 Hepatitis delta virus dFr2239b LHD gene for large HD antigen, genomic1356....t..............137494
AM779579.1 Hepatitis delta virus dFr2395 LHD gene for large HD antigen, genomic 1355.....t.............137394
AM779580.1 Hepatitis delta virus dFr2046 LHD gene for large HD antigen, genomic 1357.............c.....137594
AM779586.1 Hepatitis delta virus dTk28 LHD gene for large HD antigen, genomic RN1353.................t.137194
AM779586.1 Hepatitis delta virus dTk28 LHD gene for large HD antigen, genomic RN181______.........c.__17152
AM779587.1 Hepatitis delta virus dTk7 LHD gene for large HD antigen, genomic RNA1355.....t.............137394
AM779590.1 Hepatitis delta virus dTk38 LHD gene for large HD antigen, genomic RN1354.................t.137294
AM779591.1 Hepatitis delta virus dTk5 LHD gene for large HD antigen, genomic RNA1350.................t.136894
AM779592.1 Hepatitis delta virus dTk8 LHD gene for large HD antigen, genomic RNA1350.................t.136894
AM779593.1 Hepatitis delta virus dTk13 LHD gene for large HD antigen, genomic RN1349............c......136794
AM779597.1 Hepatitis delta virus dTk2 LHD gene for large HD antigen, genomic RNA1356.....t.............137494
AM902165.1 Hepatitis delta virus dFr2172 LHD gene for large HD antigen, genomic 1355.....t.............137394
AM902166.1 Hepatitis delta virus dFr2189 LHD gene for large HD antigen, genomic 1351.....t.............136994
AM902167.1 Hepatitis delta virus dFr2201 LHD gene for large HD antigen, genomic 1350............c......136894
AM902176.1 Hepatitis delta virus dFr2411 LHD gene for large HD antigen, genomic 1355.............c.....137394
AM902179.1 Hepatitis delta virus dFr2042 LHD gene for large HD antigen, genomic 1354.....t.............137294
AM902180.1 Hepatitis delta virus dFr2043 LHD gene for large HD antigen, genomic 1354.............c.....137294
HM046802.1 Hepatitis delta virus isolate JN, complete genome 1352...g...............137094
AM779589.1 Hepatitis delta virus dTk3 LHD gene for large HD antigen, genomic RNA1354.................__137089
M28267.1HPDCG Human hepatitis delta virus encoding delta-antigen RNA, complete1357....t............._137489
AM779595.1 Hepatitis delta virus dTk12 LHD gene for large HD antigen, genomic RN1352....ty.............137089
M58629.1HPDHDAGA Hepatitis delta virus large and small antigens (HDAg) gene, c1352............c....t.137089
X77627.1 Hepatitis D virus genomic RNA for HDAg 1349....t...........t..136789
X85253.1 Hepatitis D virus complete genome containing delta antigen ORF 1351.....t...........t.136989
AB088679.1 Hepatitis delta virus gene for HD antigen, complete cds 1361..g...........a....137989
AB118818.1 Hepatitis delta virus genomic RNA, complete genome, strain:Miyako(JA-1355..g...........a....137389
AB118819.1 Hepatitis delta virus DNA, complete genome, strain:Miyako(JA-M3) 1360..g...........a....137889
AB118820.1 Hepatitis D virus DNA, complete genome, strain:Miyako(JA-M4) 1357..g...........a....137589
AB118822.1 Hepatitis delta virus DNA, complete genome, strain:Miyako(JA-M6) 1358..g...........a....137689
AB118823.1 Hepatitis delta virus DNA, complete genome, strain:Miyako(JA-M7) 1357..g...........a....137589
AB118824.1 Hepatitis delta virus DNA, complete genome, strain:Miyako(JA-M8) 1359..g...........a....137789
AB118825.1 Hepatitis delta virus DNA, complete genome, strain:Miyako(JA-M10) 1361..g...........a....137989
AB118826.1 Hepatitis delta virus DNA, complete genome, strain:Miyako(JA-M11) 1356..g...........a....137489
AB118827.1 Hepatitis delta virus DNA, complete genome, strain:Miyako(JA-M12) 1355..g...........a....137389
AB118828.1 Hepatitis D virus DNA, complete genome, strain:Miyako(JA-M13) 1355..g...........a....137389
AB118830.1 Hepatitis delta virus DNA, complete genome, strain:Miyako(JA-M15) 1358..g...........a....137689
AB118831.1 Hepatitis delta virus DNA, complete genome, strain:Miyako(JA-M16) 1357..g...........a....137589
AB118832.1 Hepatitis delta virus DNA, complete genome, strain:Miyako(JA-M17) 1358..g...........a....137689
AB118833.1 Hepatitis delta virus DNA, complete genome, strain:Miyako(JA-M18) 1357..g...........a....137589
AB118836.1 Hepatitis delta virus DNA, complete genome, strain:Miyako(JA-M44) 1357..g...........a....137589
AB118838.1 Hepatitis delta virus DNA, complete genome, strain:Miyako(JA-M24) 1359..g...........a....137789
AB118839.1 Hepatitis delta virus DNA, complete genome, strain:Miyako(JA-M27) 1359..g...........a....137789
AB118840.1 Hepatitis delta virus DNA, complete genome, strain:Miyako(JA-M29) 1353..g...........a....137189
AB118841.1 Hepatitis delta virus DNA, complete genome, strain:Miyako(JA-M31) 1356..g...........a....137489
AB118842.1 Hepatitis delta virus DNA, complete genome, strain:Miyako(JA-M32) 1358..g...........a....137689
AB118843.1 Hepatitis delta virus DNA, complete genome, strain:Miyako(JA-M33) 1356..g...........a....137489
AB118844.1 Hepatitis delta virus DNA, complete genome, strain:Miyako(JA-M34) 1356..g...........a....137489
AB118845.1 Hepatitis delta virus DNA, complete genome, strain:Miyako(JA-M36) 1355..g...........a....137389
AB118846.1 Hepatitis delta virus DNA, complete genome, strain:Miyako(JA-M37) 1352..g...........a....137089
AB118847.1 Hepatitis delta virus DNA, complete genome, strain:Tokyo(JA-T) 1357..g...........a....137589
AJ584848.1 Hepatitis D virus mRNA for Large HD antigen (LHD gene), strain dFr-911369..g...........a....138789
AY648952.1 Hepatitis delta virus isolate TWD62#16, complete genome 1357..g...........a....137589
AY648953.1 Hepatitis delta virus isolate 2621#56, complete genome 1357..g...........a....137589
AY648954.1 Hepatitis delta virus isolate TW1025#14, complete genome 1357..g...........a....137589
AY648955.1 Hepatitis delta virus isolate TW3038#25, complete genome 1357..g...........a....137589
AM779582.1 Hepatitis delta virus dTk35 LHD gene for large HD antigen, genomic RN1354.....t...........g.137289
AM779583.1 Hepatitis delta virus dTk10 LHD gene for large HD antigen, genomic RN1357....t............t.137589
AM779584.1 Hepatitis delta virus dTk4 LHD gene for large HD antigen, genomic RNA1355....t............t.137389
AM779588.1 Hepatitis delta virus dTk34 LHD gene for large HD antigen, genomic RN1352....t............t.137089
AM779594.1 Hepatitis delta virus dTk27 LHD gene for large HD antigen, genomic RN1356....t............t.137489
AM779596.1 Hepatitis delta virus dTk21 LHD gene for large HD antigen, genomic RN1356....t............t.137489
AM902164.1 Hepatitis delta virus dFr2137 LHD gene for large HD antigen, genomic 1354.............c...t.137289
AM902170.1 Hepatitis delta virus dFr2244 LHD gene for large HD antigen, genomic 1352....ta.............137089
HQ005364.1 Hepatitis delta virus isolate 5, complete genome 1130...........t.....t.114889
HQ005365.1 Hepatitis delta virus isolate 7, complete genome 1129....t............t.114789
HQ005367.1 Hepatitis delta virus isolate 8, complete genome 1130....t............t.114889
AM779581.1 Hepatitis delta virus dTk1 LHD gene for large HD antigen, genomic RNA1352....yy...........g.137084
AJ584845.1 Hepatitis D virus mRNA for Large HD antigen (LHD gene), strain dFr-471368..g.........y.a....138684
AM183326.1 Hepatitis delta virus complete virion genome, strain dFr2600 1363..g...........a..y.138184
AF104264.1 Hepatitis D virus strain TW2476, complete genome 1356..g.t.........a....137484
AF425645.1 Hepatitis D virus isolate TWD2476-38 genotype IIa, complete genome 1353..g.t.........a....137184
AY261457.1 Hepatitis D virus isolate TW2479-12s, complete genome 1351..g.........c.a....136984
AY261458.1 Hepatitis D virus isolate TW2479-53, complete genome 1295..g.........c.a....131384
AY261460.1 Hepatitis D virus isolate TW2479-18, complete genome 1351..g.........c.a....136984
AB118821.1 Hepatitis delta virus DNA, complete genome, strain:Miyako(JA-M5) 1361..g.........c.a....137984
AB118834.1 Hepatitis delta virus DNA, complete genome, strain:Miyako(JA-M19) 1362..g...........a..a.138084
AB118835.1 Hepatitis delta virus DNA, complete genome, strain:Miyako(JA-M20) 1362..g...........a..a.138084
AJ584846.1 Hepatitis D virus mRNA for Large HD antigen (LHD gene), strain dFr-731367..g.........c.a....138584
AJ584849.1 Hepatitis D virus mRNA for small HD antigen (sHD gene), strain dFr-641353..g...........a..t.137184
AM183327.1 Hepatitis delta virus complete virion genome, strain dFr2736 1354..a...........a..t.137284
AM183328.1 Hepatitis delta virus complete virion genome, strain dFr2703 1360..g.........c.a....137884
AM183330.1 Hepatitis delta virus complete virion genome, strain dFr2072 1354..a...........a..t.137284
AM183331.1 Hepatitis delta virus complete virion genome, strain dFr2005 1358..g.t.........a....137684
AM902178.1 Hepatitis delta virus dFr2040 LHD gene for large HD antigen, genomic 1355...........tc....g.137384
AJ584844.1 Hepatitis D virus mRNA for small HD antigen (sHD gene), strain dFr-451350..g.........c.a..t.136878
AM183333.1 Hepatitis delta virus complete virion genome, strain dFr2158 1349..g.........c.a..t.136778
GU177114.1 Hepatitis delta virus isolate HDV-DN79, complete genome 1353..a.........c.a..t.137178