../../tmp/servers/virsirnadb/1762429698
Result for your query siRNA sequence
RED =100 % Complementary sequence
.=Identical residue
blue alphabets=mismatch
_=Gap


Acc numberStrain nameStartAlignmentEnd% Identity
Queryvirsi19671tggcttgggatatgatgat19
X61596.1 Hepatitis C virus core, E1, NS1/E2, NS2, NS3, NS4a, NS4b and NS5 gene1277...................1295100
D13558.1HPCJ483 Hepatitis C virus genome, complete sequence 1294...................1312100
D10750.1HPCJ491 Hepatitis C virus genome, complete sequence 1294...................1312100
D90208.1HPCJCG Hepatitis C virus ORF gene, complete cds 1282...................1300100
D11168.1HPCJTA Hepatitis C virus (HCV) complete genome 1294...................1312100
D11355.1HPCJTB Hepatitis C virus genomic RNA, complete genome, strain: JT' 1294...................1312100
L02836.1HPCCGENOM Hepatitis C virus subtype 1b strain HeBei, complete genome 1283...................1301100
U01214.1HCU01214 Hepatitis C virus subtype 1b strain HCV-L2, complete genome 1295...................1313100
D10934.1HPCRNA Hepatitis C virus RNA, complete genome sequence 1294...................1312100
D28917.1HPCK3A Hepatitis C virus (isolate HCV-K3a/650) genomic RNA, complete g1292...................1310100
X76918.1 Hepatitis C virus genes for core, envelope and NS1 proteins 1251...................1269100
D49374.1HPCFG Hepatitis C virus (isolate Tr Kj) genomic RNA, complete genome 1295...................1313100
D63857.1HPVHCVN Hepatitis C virus gene for E1 and E2/NS1 envelope glycoprotein1201...................1219100
D50483.1HPCK1S1 Hepatitis C virus (strain HCV-1b, clone HCV-K1-S1), complete g1282...................1300100
D50485.1HPCK1S2 Hepatitis C virus (strain HCV-1b, clone HCV-K1-S2), complete g1282...................1300100
D50481.1HPCK1R2 Hepatitis C virus (strain HCV-1b, clone HCV-K1-R2), complete g1282...................1300100
D50480.1HPCK1R1 Hepatitis C virus (strain HCV-1b, clone HCV-K1-R1), complete g1282...................1300100
D14484.1HPCJRNA Hepatitis C virus strain J33 genomic RNA, complete genome 1294...................1312100
U45476.1HCU45476 Hepatitis C virus isolate HD-1, complete genome 1294...................1312100
D89872.1 Hepatitis C virus RNA for polyprotein, complete cds 953...................971100
D85516.1 Hepatitis C virus genomic RNA, complete cds 1294...................1312100
Y12083.1 Hepatitis C virus genotype 6a RNA for HCV polyprotein 1236...................1254100
Y12083.1 Hepatitis C virus genotype 6a RNA for HCV polyprotein 5103___..............__511673
U89019.1HCU89019 Hepatitis C virus subtype 1b, complete genome 1289...................1307100
AJ000009.1 Hepatitis C virus complete genome sequence 1277...................1295100
AF046866.1 Hepatitis C virus subtype 3a strain CB polyprotein gene, complete cds1292...................1310100
D89815.1 Hepatitis C virus genomic RNA, complete sequence 1294...................1312100
AF054247.1 Hepatitis C virus subtype 1b strain HC-J4 isolate pCV-J4L6S, complete1294...................1312100
AF054248.1 Hepatitis C virus subtype 1b strain HC-J4 isolate pCV-J4L2S, complete1294...................1312100
AF054249.1 Hepatitis C virus subtype 1b strain HC-J4 isolate pCV-J4L4S, complete1295...................1313100
AF054250.1 Hepatitis C virus subtype 1b strain HC-J4, complete genome 1284...................1302100
AJ132996.1 Hepatitis C virus, complete genome, isolate HCV-AD78 1293...................1311100
AJ238799.1 Hepatitis C virus type 1b complete genome, isolate Con1 1294...................1312100
AJ238800.1 Hepatitis C virus type 1b complete genome, isolate NC1 953...................971100
AB016785.1 Hepatitis C virus genomic RNA, complete sequence 1295...................1313100
AF165045.1 Hepatitis C virus subtype 1b strain MD1-1, complete genome 1282...................1300100
AF165046.1 Hepatitis C virus subtype 1b strain MD1-2, complete genome 1282...................1300100
AF165047.1 Hepatitis C virus subtype 1b strain MD2-1, complete genome 1282...................1300100
AF165048.1 Hepatitis C virus subtype 1b strain MD2-2, complete genome 1282...................1300100
AF165049.1 Hepatitis C virus subtype 1b strain MD3-1, complete genome 1282...................1300100
AF165050.1 Hepatitis C virus subtype 1b strain MD3-2, complete genome 1282...................1300100
AF165051.1 Hepatitis C virus subtype 1b strain MD4-1, complete genome 1282...................1300100
AF165052.1 Hepatitis C virus subtype 1b strain MD4-2, complete genome 1282...................1300100
AF165055.1 Hepatitis C virus subtype 1b strain MD6-1, complete genome 1282...................1300100
AF165056.1 Hepatitis C virus subtype 1b strain MD6-2, complete genome 1282...................1300100
AF165057.1 Hepatitis C virus subtype 1b strain MD7-1, complete genome 1282...................1300100
AF165058.1 Hepatitis C virus subtype 1b strain MD7-2, complete genome 1282...................1300100
AF165059.1 Hepatitis C virus subtype 1b strain MD8-1, complete genome 1282...................1300100
AF165060.1 Hepatitis C virus subtype 1b strain MD8-2, complete genome 1282...................1300100
AF165061.1 Hepatitis C virus subtype 1b strain MD9-1, complete genome 1282...................1300100
AF165062.1 Hepatitis C virus subtype 1b strain MD9-2, complete genome 1282...................1300100
AF165063.1 Hepatitis C virus subtype 1b strain MD10-1, complete genome 1282...................1300100
AF165064.1 Hepatitis C virus subtype 1b strain MD10-2, complete genome 1282...................1300100
AF207752.1 Hepatitis C virus subtype 1b strain MD11, complete genome 1282...................1300100
AF207753.1 Hepatitis C virus subtype 1b strain MD12, complete genome 1282...................1300100
AF207754.1 Hepatitis C virus subtype 1b strain MD13, complete genome 1282...................1300100
AF207755.1 Hepatitis C virus subtype 1b strain MD14, complete genome 1282...................1300100
AF207756.1 Hepatitis C virus subtype 1b strain MD15, complete genome 1282...................1300100
AF207757.1 Hepatitis C virus subtype 1b strain MD16, complete genome 1282...................1300100
AF207758.1 Hepatitis C virus subtype 1b strain MD17, complete genome 1282...................1300100
AF207759.1 Hepatitis C virus subtype 1b strain MD18, complete genome 1282...................1300100
AF207760.1 Hepatitis C virus subtype 1b strain MD19, complete genome 1282...................1300100
AF207761.1 Hepatitis C virus subtype 1b strain MD20, complete genome 1282...................1300100
AF207762.1 Hepatitis C virus subtype 1b strain MD21, complete genome 1282...................1300100
AF207763.1 Hepatitis C virus subtype 1b strain MD22, complete genome 1282...................1300100
AF207764.1 Hepatitis C virus subtype 1b strain MD23, complete genome 1282...................1300100
AF207765.1 Hepatitis C virus subtype 1b strain MD24, complete genome 1282...................1300100
AF207766.1 Hepatitis C virus subtype 1b strain MD25, complete genome 1282...................1300100
AF207767.1 Hepatitis C virus subtype 1b strain MD26, complete genome 1282...................1300100
AF207768.1 Hepatitis C virus subtype 1b strain MD27, complete genome 1282...................1300100
AF207770.1 Hepatitis C virus subtype 1b strain MD29, complete genome 1282...................1300100
AF207772.1 Hepatitis C virus subtype 1b strain MD31, complete genome 1282...................1300100
AF207773.1 Hepatitis C virus subtype 1b strain MD32, complete genome 1282...................1300100
AB049087.1 Hepatitis C virus gene for polyprotein, complete cds, isolate: HCVT051263...................1281100
AB049088.1 Hepatitis C virus genomic RNA, complete genome, isolate: HCVT094 1294...................1312100
AB049089.1 Hepatitis C virus gene for polyprotein, complete cds, isolate: HCVT101263...................1281100
AB049090.1 Hepatitis C virus gene for polyprotein, complete cds, isolate: HCVT141263...................1281100
AB049091.1 Hepatitis C virus gene for polyprotein, complete cds, isolate: HCVT141212...................1230100
AB049092.1 Hepatitis C virus gene for polyprotein, complete cds, isolate: HCVT141263...................1281100
AB049093.1 Hepatitis C virus gene for polyprotein, complete cds, isolate: HCVT151263...................1281100
AB049094.1 Hepatitis C virus gene for polyprotein, complete cds, isolate: HCVT161295...................1313100
AB049095.1 Hepatitis C virus gene for polyprotein, complete cds, isolate: HCVT161263...................1281100
AB049096.1 Hepatitis C virus gene for polyprotein, complete cds, isolate: HCVT191263...................1281100
AB049097.1 Hepatitis C virus gene for polyprotein, complete cds, isolate: HCVT191263...................1281100
AB049099.1 Hepatitis C virus gene for polyprotein, complete cds, isolate: HCVT211294...................1312100
AB049100.1 Hepatitis C virus gene for polyprotein, complete cds, isolate: HCVT211263...................1281100
AB049101.1 Hepatitis C virus gene for polyprotein, complete cds, isolate: HCVT221263...................1281100
AF333324.1 Hepatitis C virus type 1b polyprotein mRNA, complete cds 1294...................1312100
AF356827.1 Hepatitis C virus subtype 1b isolate HCV-S1, complete genome 1294...................1312100
AF483269.1 Hepatitis C virus type 1b isolate HCV-TR1 from Turkey, complete genom1259...................1277100
AY460204.1 Hepatitis C virus from Shanghai, complete genome 1294...................1312100
AY587844.1 Hepatitis C virus strain N589 polyprotein gene, complete cds 1242...................1260100
AB191333.1 Hepatitis C virus genomic RNA, complete genome, strain:0 1294...................1312100
DQ071885.1 Hepatitis C virus subtype 1b polyprotein mRNA, complete cds 1294...................1312100
DQ437509.2 Hepatitis C virus isolate 452 polyprotein gene, partial cds 953...................971100
DQ835763.1 Hepatitis C virus subtype 6m isolate C-0208, complete genome 1291...................1309100
DQ835765.1 Hepatitis C virus subtype 6m isolate C-0185, complete genome 1291...................1309100
DQ835766.1 Hepatitis C virus subtype 6m isolate C-0192, complete genome 1291...................1309100
DQ835767.1 Hepatitis C virus subtype 6m isolate B4/92, complete genome 1291...................1309100
EF032892.1 Hepatitis C virus subtype 1b isolate BR1427_P1_10.7.03 polyprotein ge1270...................1288100
EF032893.1 Hepatitis C virus subtype 1b isolate BR1427_P3_11.10.03 polyprotein g1268...................1286100
EF638081.1 Hepatitis C virus subtype 1b from Hubei, complete genome 1250...................1268100
EF407460.1 Hepatitis C virus isolate 8007 polyprotein gene, complete cds 1244...................1262100
EF407461.1 Hepatitis C virus isolate 5004 polyprotein gene, complete cds 1274...................1292100
EF407465.1 Hepatitis C virus isolate 6017 polyprotein gene, complete cds 1239...................1257100
EF407469.1 Hepatitis C virus isolate 4014 polyprotein gene, complete cds 1238...................1256100
EF407471.1 Hepatitis C virus isolate 5044 polyprotein gene, complete cds 1239...................1257100
EF407472.1 Hepatitis C virus isolate 4034 polyprotein gene, complete cds 1240...................1258100
EF407475.1 Hepatitis C virus isolate 3009 polyprotein gene, complete cds 1226...................1244100
EF407476.1 Hepatitis C virus isolate 3012 polyprotein gene, complete cds 1226...................1244100
EF407479.1 Hepatitis C virus isolate 4036 polyprotein gene, complete cds 1239...................1257100
EF407480.1 Hepatitis C virus isolate 3043 polyprotein gene, complete cds 1241...................1259100
EF407482.1 Hepatitis C virus isolate 6053 polyprotein gene, complete cds 1179...................1197100
EF407485.1 Hepatitis C virus isolate 7026 polyprotein gene, complete cds 1249...................1267100
EF407487.1 Hepatitis C virus isolate 6057 polyprotein gene, complete cds 1241...................1259100
EF407488.1 Hepatitis C virus isolate 8016 polyprotein gene, complete cds 1238...................1256100
EF407492.1 Hepatitis C virus isolate 7025 polyprotein gene, complete cds 1234...................1252100
EF407493.1 Hepatitis C virus isolate 3031 polyprotein gene, complete cds 1249...................1267100
EF407501.1 Hepatitis C virus isolate 7055 polyprotein gene, complete cds 1267...................1285100
EF407502.1 Hepatitis C virus isolate 2038 polyprotein gene, complete cds 1323...................1341100
EF407503.1 Hepatitis C virus isolate 5083 polyprotein gene, complete cds 1241...................1259100
EU234061.2 Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V126/1991, complet1242...................1260100
EU234062.2 Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V135/1992, complet1242...................1260100
EU155217.2 Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V142/2004, complet1242...................1260100
EU155218.2 Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V145/2005, complet1243...................1261100
EU155219.2 Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V146/2002, complet1242...................1260100
EU155220.2 Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V147/2004, complet1228...................1246100
EU155221.2 Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V148/2004, complet1242...................1260100
EU155222.2 Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V150/2004, complet1242...................1260100
EU155223.2 Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V151/2002, complet1248...................1266100
EU155224.2 Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V152/2003, complet1242...................1260100
EU155225.2 Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V155/2003, complet1243...................1261100
EU155226.2 Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V156/2004, complet1242...................1260100
EU155227.2 Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V157/2003, complet1242...................1260100
EU155230.2 Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V160/2002, complet1242...................1260100
EU155231.2 Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V163/2002, complet1242...................1260100
EU155232.2 Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V164/2002, complet1243...................1261100
EU155234.2 Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V447/2006, complet1243...................1261100
EU482833.1 Hepatitis C virus subtype 1b isolate HCV-1b/DE/BID-V503/2003, complet1242...................1260100
EU482839.1 Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V370/2006, complet1242...................1260100
EU482849.1 Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V138/1989, complet1242...................1260100
EU482856.1 Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V250/2002, complet1212...................1230100
EU482856.1 Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V250/2002, complet2490__.............____247868
EU482859.1 Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V272/2003, complet1242...................1260100
EU482860.1 Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V302/2003, complet1242...................1260100
EU482875.1 Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V310/2005, complet1242...................1260100
EU482879.1 Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V372/2006, complet1242...................1260100
EU482881.1 Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V383/2003, complet1242...................1260100
EU482883.1 Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V153/2005, complet1242...................1260100
EU482885.1 Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V448/2006, complet1242...................1260100
EU482886.1 Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V458/2006, complet1243...................1261100
EU482888.1 Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V123/1992, complet1242...................1260100
EU155253.2 Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V363/2006, complet1242...................1260100
EU155254.2 Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V365/2006, complet1243...................1261100
EU155255.2 Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V366/2006, complet1242...................1260100
EU155257.2 Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V369/2006, complet1242...................1260100
EU155258.2 Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V371/2006, complet1242...................1260100
EU155259.2 Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V374/2006, complet1242...................1260100
EU155260.2 Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V375/2006, complet1242...................1260100
EU155262.2 Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V381/2001, complet1242...................1260100
EU155263.2 Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V384/2005, complet1242...................1260100
EU155264.2 Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V385/2006, complet1220...................1238100
EU155279.2 Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V441/2001, complet1242...................1260100
EU155280.2 Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V442/2001, complet1242...................1260100
EU155281.2 Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V512/2005, complet1242...................1260100
EU155300.2 Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V341/2003, complet1241...................1259100
EU155301.2 Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V344/2001, complet1242...................1260100
EU155302.2 Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V345/2001, complet1242...................1260100
EU155303.2 Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V346/2001, complet1242...................1260100
EU155304.2 Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V347/2003, complet971...................989100
EU155305.2 Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V350/2002, complet1242...................1260100
EU155306.2 Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V352/2002, complet1242...................1260100
EU155307.2 Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V353/2002, complet1243...................1261100
EU155308.2 Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V354/2003, complet1242...................1260100
EU155315.2 Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V416/2001, complet1242...................1260100
EU155317.2 Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V420/2002, complet1242...................1260100
EU155318.2 Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V421/2005, complet1242...................1260100
EU155324.2 Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V121/1992, complet1242...................1260100
EU155325.2 Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V122/1991, complet1242...................1260100
EU155326.2 Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V124/1992, complet1242...................1260100
EU155327.2 Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V125/1992, complet1235...................1253100
EU155328.2 Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V127/1992, complet1242...................1260100
EU155329.2 Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V128/1992, complet1242...................1260100
EU155330.2 Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V130/1994, complet1264...................1282100
EU155331.2 Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V131/1990, complet1242...................1260100
EU155332.2 Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V132/1996, complet1242...................1260100
EU155335.2 Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V136/1992, complet1242...................1260100
EU155336.2 Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V139/1992, complet1242...................1260100
EU155356.2 Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V273/2003, complet1242...................1260100
EU155357.2 Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V275/2003, complet1242...................1260100
EU155358.2 Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V276/2004, complet1242...................1260100
EU155359.2 Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V277/2002, complet1243...................1261100
EU155360.2 Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V278/2003, complet1242...................1260100
EU155361.2 Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V281/2004, complet1242...................1260100
EU155363.2 Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V285/2005, complet1242...................1260100
EU155365.2 Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V289/2006, complet1242...................1260100
EU155367.2 Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V295/2002, complet1242...................1260100
EU155368.2 Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V296/2001, complet1242...................1260100
EU155369.2 Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V297/2002, complet1242...................1260100
EU155370.2 Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V300/2005, complet1242...................1260100
EU155371.2 Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V301/2005, complet1242...................1260100
EU155372.2 Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V306/2004, complet1242...................1260100
EU155373.2 Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V307/2005, complet1242...................1260100
EU155374.2 Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V308/2005, complet1264...................1282100
EU155377.2 Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V313/2006, complet1242...................1260100
EU155381.2 Hepatitis C virus subtype 1b isolate HCV-1b/DE/BID-V502/2004, complet1242...................1260100
EU529682.1 Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V291/2002, complet960...................978100
EU660386.1 Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V355/2006, complet1242...................1260100
EU660388.1 Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V154/2001, complet1243...................1261100
AB429050.1 Hepatitis C virus gene for polyprotein, complete cds, isolate: AH1 1294...................1312100
EU255960.1 Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V312/2006, complet1242...................1260100
EU256059.1 Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V220/2005, complet1242...................1260100
EU256062.1 Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V368/2006, complet1245...................1263100
EU256064.1 Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V376/2006, complet1242...................1260100
EU256088.1 Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V149/2003, complet1242...................1260100
EU256089.1 Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V161/2002, complet1242...................1260100
EU256091.1 Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V455/2006, complet960...................978100
EU256098.1 Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V343/2002, complet1242...................1260100
EU256099.1 Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V348/2002, complet1242...................1260100
EU256100.1 Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V349/2002, complet1242...................1260100
EU256101.1 Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V351/2002, complet1242...................1260100
EU256102.1 Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V415/2001, complet1242...................1260100
EU256103.1 Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V418/2001, complet1242...................1260100
EU256000.1 Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V143/2003, complet1242...................1260100
EU256001.1 Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V144/2002, complet1242...................1260100
EU256045.1 Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V380/2003, complet1242...................1260100
EU256054.1 Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V443/2001, complet1242...................1260100
EU256072.1 Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V238/2005, complet1201...................1219100
EU256072.1 Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V238/2005, complet2479__.............____246768
EU256075.1 Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V279/2004, complet1242...................1260100
EU256076.1 Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V280/2004, complet1242...................1260100
EU256077.1 Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V283/2005, complet1242...................1260100
EU256078.1 Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V284/2005, complet1244...................1262100
EU256079.1 Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V286/2005, complet1243...................1261100
EU256081.1 Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V293/2002, complet1242...................1260100
EU256082.1 Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V298/2005, complet1243...................1261100
EU256083.1 Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V299/2005, complet1242...................1260100
EU256084.1 Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V303/2003, complet1242...................1260100
EU256085.1 Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V305/2003, complet1242...................1260100
EU255961.1 Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V137/1991, complet1242...................1260100
EU255962.1 Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V140/1991, complet960...................978100
FJ024086.1 Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V1704/2007, comple1242...................1260100
FJ024277.1 Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V1711/2007, comple1242...................1260100
FJ024279.1 Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V1715/2007, comple1242...................1260100
EU862835.1 Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V509/2001, partial1242...................1260100
FJ390397.1 Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V1749/2008, comple1242...................1260100
AB442220.1 Hepatitis C virus subtype 1b genomic RNA, complete genome, clone: KAH1294...................1312100
AB442221.1 Hepatitis C virus subtype 1b genomic RNA, complete genome, clone: KAH1294...................1312100
FJ407092.1 Hepatitis C virus isolate IND-HCV-3i, complete genome 1293...................1311100
FJ462440.1 Hepatitis C virus isolate QC93, complete genome 1294...................1312100
FN435993.1 Hepatitis C virus subtype 1b complete genome, isolate EU1, genomic RN1295...................1313100
EU862837.1 Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V304/2004, complet1243...................1261100
GQ275355.1 Hepatitis C virus subtype 3a, complete genome 1292...................1310100
GU133617.1 Hepatitis C virus subtype 1b, complete genome 1294...................1312100
D17763.1HPCEGS Hepatitis C virus (isolate NZL1) genomic RNA, complete genome 1292...................1310100
D10749.1HPCHCJ1 Hepatitis C virus genomic RNA, complete genome, isolate: HC-J11294....a..............131294
M96362.1HPCUNKCDS Hepatitis C virus mRNA, complete cds 1295....c..............131394
M84754.1HPCGENANTI Hepatitis C virus subtype 1b strain Taiwan, complete genome1294..........c........131294
M58335.1HPCHUMR Hepatitis C virus subtype 1b, complete genome 1285..........c........130394
M62321.1HPCPLYPRE Hepatitis C virus subtype 1a, complete genome 1294....a..............131294
M62321.1HPCPLYPRE Hepatitis C virus subtype 1a, complete genome 2572__.............____256068
D14853.1HPCCGS Hepatitis C virus (isolate HC-G9) genomic RNA, complete genome 1294..........c........131294
D30613.1HPCPP Hepatitis C virus complete genome sequence 1294................a..131294
U16362.1HCU16362 Hepatitis C virus subtype 1b, complete genome 1295....c..............131394
D50482.1HPCK1R3 Hepatitis C virus (strain HCV-1b, clone HCV-K1-R3), complete g1282....c..............130094
D50484.1HPCK1S3 Hepatitis C virus (strain HCV-1b, clone HCV-K1-S3), complete g1282....c..............130094
D63821.1HPCJK049E1 Hepatitis C virus (isolate JK049) genomic RNA, complete gen1292..........c........131094
D45172.1HPCHCPO Hepatitis C virus genomic RNA for HCV polyprotein, complete cd1294................a..131294
D50409.1 Hepatitis C virus (isolate BEBE1) genomic RNA, complete genome 1293....c..............131194
AF011751.1 Hepatitis C virus strain H77 pCV-H77C polyprotein gene, complete cds 1294....a..............131294
AF011751.1 Hepatitis C virus strain H77 pCV-H77C polyprotein gene, complete cds 2572__.............____256068
AF011752.1 Hepatitis C virus strain H77 pCV-H11 polyprotein gene, complete cds 1294....a..............131294
AF011752.1 Hepatitis C virus strain H77 pCV-H11 polyprotein gene, complete cds 2572__.............____256068
AF011753.1 Hepatitis C virus strain H77 pH21 polyprotein gene, complete cds 1294....a..............131294
AF011753.1 Hepatitis C virus strain H77 pH21 polyprotein gene, complete cds 2572__.............____256068
AJ132997.1 Hepatitis C virus, complete genome, isolate HCV-AD78P1 1293..........c........131194
AF176573.1 Hepatitis C virus subtype 1b strain 274933RU, complete genome 1294....c..............131294
AF165053.1 Hepatitis C virus subtype 1b strain MD5-1, complete genome 1282....c..............130094
AF165054.1 Hepatitis C virus subtype 1b strain MD5-2, complete genome 1282....c..............130094
AB031663.1 Hepatitis C virus (isolate VAT96) genomic RNA, complete genome 1294....a..............131294
AF238481.1 Hepatitis C virus subtype 2a strain MD2a-1, complete genome 1259....a..............127794
AF208024.1 Hepatitis C virus subtype 1b strain MD34, complete genome 1282....c..............130094
AF207769.1 Hepatitis C virus subtype 1b strain MD28, complete genome 1282..........c........130094
AF207771.1 Hepatitis C virus subtype 1b strain MD30, complete genome 1282....c..............130094
AF207774.1 Hepatitis C virus subtype 1b strain MD33, complete genome 1282..........c........130094
AF271632.1 Hepatitis C virus subtype 1a clone pHCV-1/SF9 A, complete genome 1294....a..............131294
AF271632.1 Hepatitis C virus subtype 1a clone pHCV-1/SF9 A, complete genome 2572__.............____256068
AJ278830.1 Hepatitis C virus genomic RNA for polyprotein gene 1294....a..............131294
AJ278830.1 Hepatitis C virus genomic RNA for polyprotein gene 2572__.............____256068
AF290978.1 Hepatitis C virus subtype 1a isolate colonel, complete genome 1282....a..............130094
AF290978.1 Hepatitis C virus subtype 1a isolate colonel, complete genome 2560__.............____254868
AB049098.1 Hepatitis C virus gene for polyprotein, complete cds, isolate: HCVT201263..........c........128194
AY051292.1 Hepatitis C virus (isolate India) polyprotein mRNA, complete cds 1294..........c........131294
AY045702.1 Hepatitis C virus isolate HCR6, complete genome 1296..........c........131494
AF511948.1 Hepatitis C virus isolate XF222 polyprotein-like gene, complete seque1294....a..............131294
AF511948.1 Hepatitis C virus isolate XF222 polyprotein-like gene, complete seque2572__.............____256068
AF511949.1 Hepatitis C virus isolate XF223 polyprotein-like gene, complete seque1294....a..............131294
AF511949.1 Hepatitis C virus isolate XF223 polyprotein-like gene, complete seque2571___............____256063
AF511950.1 Hepatitis C virus isolate XF224 polyprotein-like gene, complete seque1266....a..............128494
AF511950.1 Hepatitis C virus isolate XF224 polyprotein-like gene, complete seque2544__.............____253268
AB080299.1 Hepatitis C virus genomic RNA, complete genome, isolate:M1LE 1294..........c........131294
AY587845.1 Hepatitis C virus strain RF1_2k/1b, N687 polyprotein gene, complete c1221....a..............123994
AY651061.1 Hepatitis C virus isolate Khaja1, complete genome 1294..........c........131294
AB154177.1 Hepatitis C virus subtype 1b gene for polyprotein, partial cds, isola1282..........c........130094
AB154178.1 Hepatitis C virus subtype 1b gene for polyprotein, partial cds, isola1282..........c........130094
AB154179.1 Hepatitis C virus subtype 1b gene for polyprotein, partial cds, isola1282..........c........130094
AB154180.1 Hepatitis C virus subtype 1b gene for polyprotein, partial cds, isola1282..........c........130094
AB154181.1 Hepatitis C virus subtype 1b gene for polyprotein, partial cds, isola1282..........c........130094
AB154182.1 Hepatitis C virus subtype 1b gene for polyprotein, partial cds, isola1282..........c........130094
AB154183.1 Hepatitis C virus subtype 1b gene for polyprotein, partial cds, isola1282..........c........130094
AB154185.1 Hepatitis C virus subtype 1b gene for polyprotein, partial cds, isola1282..........c........130094
AB154186.1 Hepatitis C virus subtype 1b gene for polyprotein, partial cds, isola1282..........c........130094
AB154187.1 Hepatitis C virus subtype 1b gene for polyprotein, partial cds, isola1282..........c........130094
AB154189.1 Hepatitis C virus subtype 1b gene for polyprotein, partial cds, isola1282..........c........130094
AB154191.1 Hepatitis C virus subtype 1b gene for polyprotein, partial cds, isola1282..........c........130094
AB154192.1 Hepatitis C virus subtype 1b gene for polyprotein, partial cds, isola1282..........c........130094
AB154194.1 Hepatitis C virus subtype 1b gene for polyprotein, partial cds, isola1282..........c........130094
AB154198.1 Hepatitis C virus subtype 1b gene for polyprotein, partial cds, isola1282..........c........130094
AB154200.1 Hepatitis C virus subtype 1b gene for polyprotein, partial cds, isola1282..........c........130094
AB154201.1 Hepatitis C virus subtype 1b gene for polyprotein, partial cds, isola1282..........c........130094
AB154202.1 Hepatitis C virus subtype 1b gene for polyprotein, partial cds, isola1282..........c........130094
AB154203.1 Hepatitis C virus subtype 1b gene for polyprotein, partial cds, isola1282..........c........130094
AB154204.1 Hepatitis C virus subtype 1b gene for polyprotein, partial cds, isola1282..........c........130094
AB154205.1 Hepatitis C virus subtype 1b gene for polyprotein, partial cds, isola1282..........c........130094
AB154206.1 Hepatitis C virus subtype 1b gene for polyprotein, partial cds, isola1282..........c........130094
AY859526.1 Hepatitis C virus (isolate 6a33), complete genome 1248..........c........126694
AY859526.1 Hepatitis C virus (isolate 6a33), complete genome 5118___.........c....__513168
D84263.2 Hepatitis C virus (isolate VN235) genomic RNA, complete genome 1291....a..............130994
AY878652.1 Hepatitis C virus subtype 6n isolate KM42, complete genome 1261....c..............127994
DQ278894.1 Hepatitis C virus subtype 6n isolate KM42, complete genome 1295....c..............131394
DQ314805.1 Hepatitis C virus subtype 6e isolate GX004, complete genome 1291....g..............130994
DQ418786.1 Hepatitis C virus subtype 4d isolate 03-18 polyprotein gene, complete1187..........c........120594
DQ480512.1 Hepatitis C virus subtype 6a strain 6a77, complete genome 1251..........c........126994
DQ480512.1 Hepatitis C virus subtype 6a strain 6a77, complete genome 5121___.........c....__513468
DQ480513.1 Hepatitis C virus subtype 6a strain 6a35, complete genome 1251..........c........126994
DQ480513.1 Hepatitis C virus subtype 6a strain 6a35, complete genome 5121___.........c....__513468
DQ480514.1 Hepatitis C virus subtype 6a strain 6a63, complete genome 1251..........c........126994
DQ480514.1 Hepatitis C virus subtype 6a strain 6a63, complete genome 5121___.........c....__513468
DQ480515.1 Hepatitis C virus subtype 6a strain 6a64, complete genome 1251..........c........126994
DQ480515.1 Hepatitis C virus subtype 6a strain 6a64, complete genome 5121___.........c....__513468
DQ480516.1 Hepatitis C virus subtype 6a strain 6a61, complete genome 1251..........c........126994
DQ480517.1 Hepatitis C virus subtype 6a strain 6a73, complete genome 1251..........c........126994
DQ480517.1 Hepatitis C virus subtype 6a strain 6a73, complete genome 5121___..........a...__513468
DQ480518.1 Hepatitis C virus subtype 6a strain 6a65, complete genome 1251..........c........126994
DQ480519.1 Hepatitis C virus subtype 6a strain 6a66, complete genome 1251..........c........126994
DQ480519.1 Hepatitis C virus subtype 6a strain 6a66, complete genome 5121___..............__513473
DQ480520.1 Hepatitis C virus subtype 6a strain 6a67, complete genome 1251..........c........126994
DQ480520.1 Hepatitis C virus subtype 6a strain 6a67, complete genome 5121___.........c....__513468
DQ480521.1 Hepatitis C virus subtype 6a strain 6a69, complete genome 1251..........c........126994
DQ480521.1 Hepatitis C virus subtype 6a strain 6a69, complete genome 5121___.........c....__513468
DQ480522.1 Hepatitis C virus subtype 6a strain 6a72, complete genome 1251..........c........126994
DQ480522.1 Hepatitis C virus subtype 6a strain 6a72, complete genome 5121___..............__513473
DQ480523.1 Hepatitis C virus subtype 6a strain 6a62, complete genome 1251..........c........126994
DQ480523.1 Hepatitis C virus subtype 6a strain 6a62, complete genome 5121___.........c....__513468
DQ480524.1 Hepatitis C virus subtype 6a strain 6a74, complete genome 1251..........c........126994
DQ480524.1 Hepatitis C virus subtype 6a strain 6a74, complete genome 5124___.........c....__513768
DQ516083.1 Hepatitis C virus subtype 4d isolate 24 polyprotein gene, complete cd1232..........c........125094
DQ835760.1 Hepatitis C virus subtype 6f isolate C-0044, complete genome 1291....a..............130994
DQ835768.1 Hepatitis C virus subtype 6n isolate D86/93, complete genome 1291....c..............130994
EF026073.1 Hepatitis C virus strain RF3 2/5 polyprotein mRNA, partial cds 1271....c..............128994
EF032883.1 Hepatitis C virus subtype 1a isolate 03-32_P1_10.16.03 polyprotein ge1216....g..............123494
EF032883.1 Hepatitis C virus subtype 1a isolate 03-32_P1_10.16.03 polyprotein ge2494__.............____248268
EF032884.1 Hepatitis C virus subtype 1a isolate 03-32_P2_5.14.04 polyprotein gen1195....g..............121394
EF032884.1 Hepatitis C virus subtype 1a isolate 03-32_P2_5.14.04 polyprotein gen2473__.............____246168
EF032885.1 Hepatitis C virus subtype 1a isolate 03-32_P4_11.5.05 polyprotein gen1215....g..............123394
EF032885.1 Hepatitis C virus subtype 1a isolate 03-32_P4_11.5.05 polyprotein gen2493__.............____248168
EF032886.1 Hepatitis C virus subtype 1a isolate BR601 polyprotein gene, complete1221....a..............123994
EF032886.1 Hepatitis C virus subtype 1a isolate BR601 polyprotein gene, complete2499__.............____248768
EF032887.1 Hepatitis C virus subtype 1a isolate BR554_P1_5.23.03 polyprotein gen1228....a..............124694
EF032887.1 Hepatitis C virus subtype 1a isolate BR554_P1_5.23.03 polyprotein gen2506__.............____249468
EF032888.1 Hepatitis C virus subtype 1a isolate BR554_P10_10.21.03 polyprotein g1216....a..............123494
EF032888.1 Hepatitis C virus subtype 1a isolate BR554_P10_10.21.03 polyprotein g2494__.............____248268
EF032889.1 Hepatitis C virus subtype 1a isolate BR554_P16_6.24.04 polyprotein ge1200....a..............121894
EF032889.1 Hepatitis C virus subtype 1a isolate BR554_P16_6.24.04 polyprotein ge2478__.............____246668
EF032890.1 Hepatitis C virus subtype 1a isolate BR554_P17_10.21.04 polyprotein g1214....a..............123294
EF032890.1 Hepatitis C virus subtype 1a isolate BR554_P17_10.21.04 polyprotein g2492__.............____248068
EF032900.1 Hepatitis C virus subtype 1a isolate BR111_P5_4.30.03 polyprotein gen1214....a..............123294
EF032900.1 Hepatitis C virus subtype 1a isolate BR111_P5_4.30.03 polyprotein gen2492__.............____248068
AB249644.1 Hepatitis C virus subtype 1b genomic RNA, complete genome, hiroshima 1294....c..............131294
AM408911.1 Hepatitis C virus partial gene for polyprotein, recombinant 2/5, geno1271....c..............128994
EF424625.1 Hepatitis C virus subtype 6q isolate QC99, complete genome 1292....r..............131094
EF424627.1 Hepatitis C virus subtype 6o isolate QC227, complete genome 1291....a..............130994
EF424629.1 Hepatitis C virus subtype 6c isolate Th846, complete genome 1292....g..............131094
EF621489.1 Hepatitis C virus subtype 1a strain HC-TN, complete genome 1294....a..............131294
EF621489.1 Hepatitis C virus subtype 1a strain HC-TN, complete genome 2571___............____256063
EF407411.1 Hepatitis C virus isolate 5043 polyprotein gene, complete cds 1200....a..............121894
EF407411.1 Hepatitis C virus isolate 5043 polyprotein gene, complete cds 2480___............____246963
EF407413.1 Hepatitis C virus isolate 5012 polyprotein gene, complete cds 1241....a..............125994
EF407413.1 Hepatitis C virus isolate 5012 polyprotein gene, complete cds 2519__.............____250768
EF407414.1 Hepatitis C virus isolate 7018 polyprotein gene, complete cds 1197....a..............121594
EF407414.1 Hepatitis C virus isolate 7018 polyprotein gene, complete cds 2475__.............____246368
EF407415.1 Hepatitis C virus isolate 3018 polyprotein gene, complete cds 1244....a..............126294
EF407415.1 Hepatitis C virus isolate 3018 polyprotein gene, complete cds 2522__.............____251068
EF407417.1 Hepatitis C virus isolate 4040 polyprotein gene, complete cds 1253....g..............127194
EF407417.1 Hepatitis C virus isolate 4040 polyprotein gene, complete cds 2531__.............____251968
EF407418.1 Hepatitis C virus isolate 7020 polyprotein gene, complete cds 1238....a..............125694
EF407418.1 Hepatitis C virus isolate 7020 polyprotein gene, complete cds 2516__.............____250468
EF407419.1 Hepatitis C virus isolate 5003 polyprotein gene, complete cds 1245....a..............126394
EF407419.1 Hepatitis C virus isolate 5003 polyprotein gene, complete cds 2523__.............____251168
EF407421.1 Hepatitis C virus isolate 8030 polyprotein gene, complete cds 1197....a..............121594
EF407421.1 Hepatitis C virus isolate 8030 polyprotein gene, complete cds 2475__.............____246368
EF407422.1 Hepatitis C virus isolate 6001 polyprotein gene, complete cds 1200....a..............121894
EF407422.1 Hepatitis C virus isolate 6001 polyprotein gene, complete cds 2478__.............____246668
EF407423.1 Hepatitis C virus isolate 8028 polyprotein gene, complete cds 1240....a..............125894
EF407423.1 Hepatitis C virus isolate 8028 polyprotein gene, complete cds 2518__.............____250668
EF407424.1 Hepatitis C virus isolate 5069 polyprotein gene, partial cds 1218....a..............123694
EF407424.1 Hepatitis C virus isolate 5069 polyprotein gene, partial cds 2508__.............____249668
EF407425.1 Hepatitis C virus isolate 6071 polyprotein gene, complete cds 1208....a..............122694
EF407425.1 Hepatitis C virus isolate 6071 polyprotein gene, complete cds 2486__.............____247468
EF407426.1 Hepatitis C virus isolate 8070 polyprotein genomic sequence 1243....a..............126194
EF407426.1 Hepatitis C virus isolate 8070 polyprotein genomic sequence 2521__.............____250968
EF407427.1 Hepatitis C virus isolate 6025 polyprotein gene, complete cds 1241....a..............125994
EF407428.1 Hepatitis C virus isolate 1024 polyprotein gene, complete cds 1200....a..............121894
EF407428.1 Hepatitis C virus isolate 1024 polyprotein gene, complete cds 2478__.............____246668
EF407431.1 Hepatitis C virus isolate 3005 polyprotein gene, complete cds 1192....a..............121094
EF407431.1 Hepatitis C virus isolate 3005 polyprotein gene, complete cds 2470__.............____245868
EF407432.1 Hepatitis C virus isolate 1013 polyprotein gene, complete cds 1255....a..............127394
EF407432.1 Hepatitis C virus isolate 1013 polyprotein gene, complete cds 2533__.............____252168
EF407433.1 Hepatitis C virus isolate 7046 polyprotein gene, complete cds 1245....a..............126394
EF407433.1 Hepatitis C virus isolate 7046 polyprotein gene, complete cds 2522___............____251163
EF407434.1 Hepatitis C virus isolate 2011 polyprotein gene, complete cds 1216....a..............123494
EF407434.1 Hepatitis C virus isolate 2011 polyprotein gene, complete cds 2494__.............____248268
EF407435.1 Hepatitis C virus isolate 5014 polyprotein gene, complete cds 1211....a..............122994
EF407435.1 Hepatitis C virus isolate 5014 polyprotein gene, complete cds 2489__.............____247768
EF407436.1 Hepatitis C virus isolate 7040 polyprotein gene, complete cds 1199....a..............121794
EF407437.1 Hepatitis C virus isolate 1030 polyprotein gene, complete cds 1254....a..............127294
EF407437.1 Hepatitis C virus isolate 1030 polyprotein gene, complete cds 2532__.............____252068
EF407439.1 Hepatitis C virus isolate 8003 polyprotein gene, complete cds 1239....a..............125794
EF407439.1 Hepatitis C virus isolate 8003 polyprotein gene, complete cds 2516___............____250563
EF407440.1 Hepatitis C virus isolate 7002 polyprotein gene, complete cds 1242....a..............126094
EF407440.1 Hepatitis C virus isolate 7002 polyprotein gene, complete cds 2520__.............____250868
EF407441.1 Hepatitis C virus isolate 1036 polyprotein gene, complete cds 1253....a..............127194
EF407441.1 Hepatitis C virus isolate 1036 polyprotein gene, complete cds 2531__.............____251968
EF407442.1 Hepatitis C virus isolate 8012 polyprotein gene, complete cds 1208....a..............122694
EF407442.1 Hepatitis C virus isolate 8012 polyprotein gene, complete cds 2486__.............____247468
EF407443.1 Hepatitis C virus isolate 7024 polyprotein gene, complete cds 1254....g..............127294
EF407443.1 Hepatitis C virus isolate 7024 polyprotein gene, complete cds 2532__.............____252068
EF407444.1 Hepatitis C virus isolate 6030 polyprotein gene, complete cds 1215....a..............123394
EF407444.1 Hepatitis C virus isolate 6030 polyprotein gene, complete cds 2492___............____248163
EF407445.1 Hepatitis C virus isolate 5009 polyprotein gene, complete cds 1215....g..............123394
EF407445.1 Hepatitis C virus isolate 5009 polyprotein gene, complete cds 2493__.............____248168
EF407446.1 Hepatitis C virus isolate 8009 polyprotein gene, complete cds 1215....a..............123394
EF407447.1 Hepatitis C virus isolate 8004 polyprotein gene, complete cds 1254....a..............127294
EF407447.1 Hepatitis C virus isolate 8004 polyprotein gene, complete cds 2532__.............____252068
EF407448.1 Hepatitis C virus isolate 6018 polyprotein gene, partial cds 1254....g..............127294
EF407448.1 Hepatitis C virus isolate 6018 polyprotein gene, partial cds 2532__.............____252068
EF407449.1 Hepatitis C virus isolate 2027 polyprotein gene, complete cds 1254....a..............127294
EF407449.1 Hepatitis C virus isolate 2027 polyprotein gene, complete cds 2531___............____252063
EF407451.1 Hepatitis C virus isolate 7041 polyprotein gene, complete cds 1217....a..............123594
EF407451.1 Hepatitis C virus isolate 7041 polyprotein gene, complete cds 2495__.............____248368
EF407452.1 Hepatitis C virus isolate 2005 polyprotein gene, complete cds 1225....a..............124394
EF407452.1 Hepatitis C virus isolate 2005 polyprotein gene, complete cds 2502___............____249163
EF407453.1 Hepatitis C virus isolate 4035 polyprotein gene, complete cds 1241....a..............125994
EF407453.1 Hepatitis C virus isolate 4035 polyprotein gene, complete cds 2519__.............____250768
EF407454.1 Hepatitis C virus isolate 6031 polyprotein gene, complete cds 1206....g..............122494
EF407454.1 Hepatitis C virus isolate 6031 polyprotein gene, complete cds 2483___............____247263
EF407455.1 Hepatitis C virus isolate 7065 polyprotein gene, complete cds 1254....a..............127294
EF407455.1 Hepatitis C virus isolate 7065 polyprotein gene, complete cds 2532__.............____252068
EF407456.1 Hepatitis C virus isolate 4025 polyprotein gene, complete cds 1253....a..............127194
EF407456.1 Hepatitis C virus isolate 4025 polyprotein gene, complete cds 2531__.............____251968
EF407457.1 Hepatitis C virus isolate 1003 polyprotein gene, complete cds 1098....a..............111694
EF407457.1 Hepatitis C virus isolate 1003 polyprotein gene, complete cds 2376__.............____236468
EF407483.1 Hepatitis C virus isolate 4043 polyprotein gene, complete cds 1269....c..............128794
EF407497.1 Hepatitis C virus isolate 5002 polyprotein gene, complete cds 1238..........c........125694
EF407504.1 Hepatitis C virus isolate 8069 polyprotein gene, complete cds 1248....c..............126694
EU155241.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V71/2002, complete1190....a..............120894
EU155241.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V71/2002, complete2468__.............____245668
EU155294.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V329/2002, complet1188....a..............120694
EU155294.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V329/2002, complet2466__.............____245468
EU155345.1 Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V221/2002, complet1202....a..............122094
EU155345.1 Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V221/2002, complet2480__.............____246868
EU155350.1 Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V256/2003, complet1175....a..............119394
EU155350.1 Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V256/2003, complet2453__.............____244168
EU155379.1 Hepatitis C virus subtype 1a isolate HCV-1a/DE/BID-V29/2003, complete1190....a..............120894
EU155379.1 Hepatitis C virus subtype 1a isolate HCV-1a/DE/BID-V29/2003, complete2468__.............____245668
EU260395.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V10/2005, complete1227....a..............124594
EU260395.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V10/2005, complete2505__.............____249368
EU246930.1 Hepatitis C virus strain D9 polyprotein gene, complete cds 1269..........c........128794
EU362876.1 Hepatitis C virus isolate 1013_FU24 polyprotein (pol) gene, complete 1253....a..............127194
EU362876.1 Hepatitis C virus isolate 1013_FU24 polyprotein (pol) gene, complete 2531__.............____251968
EU362877.1 Hepatitis C virus isolate 1024_FU24 polyprotein (pol) gene, complete 1199....a..............121794
EU362877.1 Hepatitis C virus isolate 1024_FU24 polyprotein (pol) gene, complete 2477__.............____246568
EU362878.1 Hepatitis C virus isolate 1030_FU24 polyprotein (pol) gene, partial c1254....a..............127294
EU362878.1 Hepatitis C virus isolate 1030_FU24 polyprotein (pol) gene, partial c2532__.............____252068
EU362879.1 Hepatitis C virus isolate 2005_FU24 polyprotein (pol) gene, partial c1253....a..............127194
EU362879.1 Hepatitis C virus isolate 2005_FU24 polyprotein (pol) gene, partial c2530___............____251963
EU362880.1 Hepatitis C virus isolate 2011_FU24 polyprotein (pol) gene, partial c1215....a..............123394
EU362880.1 Hepatitis C virus isolate 2011_FU24 polyprotein (pol) gene, partial c2493__.............____248168
EU362881.1 Hepatitis C virus isolate 2027_FU24 polyprotein (pol) gene, partial c1255....a..............127394
EU362881.1 Hepatitis C virus isolate 2027_FU24 polyprotein (pol) gene, partial c2533__.............____252168
EU362882.1 Hepatitis C virus isolate 3005_FU24 polyprotein (pol) gene, complete 1213....a..............123194
EU362882.1 Hepatitis C virus isolate 3005_FU24 polyprotein (pol) gene, complete 2491__.............g.._247678
EU362883.1 Hepatitis C virus isolate 4025_FU24 polyprotein (pol) gene, partial c1253....a..............127194
EU362883.1 Hepatitis C virus isolate 4025_FU24 polyprotein (pol) gene, partial c2531__.............____251968
EU362884.1 Hepatitis C virus isolate 4035_FU24 polyprotein (pol) gene, complete 1256....a..............127494
EU362884.1 Hepatitis C virus isolate 4035_FU24 polyprotein (pol) gene, complete 2534__.............____252268
EU362885.1 Hepatitis C virus isolate 5009_FU24 polyprotein (pol) gene, partial c1212....a..............123094
EU362885.1 Hepatitis C virus isolate 5009_FU24 polyprotein (pol) gene, partial c2490__.............____247868
EU362886.1 Hepatitis C virus isolate 5014_FU24 polyprotein (pol) gene, complete 1216....g..............123494
EU362886.1 Hepatitis C virus isolate 5014_FU24 polyprotein (pol) gene, complete 2494__.............____248268
EU362890.1 Hepatitis C virus isolate 7002_FU24 polyprotein (pol) gene, partial c1253....g..............127194
EU362890.1 Hepatitis C virus isolate 7002_FU24 polyprotein (pol) gene, partial c2531__.............____251968
EU362891.1 Hepatitis C virus isolate 7003_FU24 polyprotein (pol) gene, partial c1216....a..............123494
EU362891.1 Hepatitis C virus isolate 7003_FU24 polyprotein (pol) gene, partial c2494__.............____248268
EU362893.1 Hepatitis C virus isolate 7040_FU24 polyprotein (pol) gene, complete 1202....a..............122094
EU362894.1 Hepatitis C virus isolate 7041_FU24 polyprotein (pol) gene, partial c1191....a..............120994
EU362894.1 Hepatitis C virus isolate 7041_FU24 polyprotein (pol) gene, partial c2469__.............____245768
EU362895.1 Hepatitis C virus isolate 7043_FU24 polyprotein (pol) gene, complete 1212....a..............123094
EU362895.1 Hepatitis C virus isolate 7043_FU24 polyprotein (pol) gene, complete 2490__.............____247868
EU362896.1 Hepatitis C virus isolate 7046_FU24 polyprotein (pol) gene, complete 1253....a..............127194
EU362896.1 Hepatitis C virus isolate 7046_FU24 polyprotein (pol) gene, complete 2530___............____251963
EU362897.1 Hepatitis C virus isolate 7065_FU24 polyprotein (pol) gene, complete 1253....a..............127194
EU362897.1 Hepatitis C virus isolate 7065_FU24 polyprotein (pol) gene, complete 2531__.............____251968
EU362898.1 Hepatitis C virus isolate 8012_FU24 polyprotein (pol) gene, complete 1198....a..............121694
EU362898.1 Hepatitis C virus isolate 8012_FU24 polyprotein (pol) gene, complete 2476__.............____246468
EU362899.1 Hepatitis C virus isolate 1013q polyprotein (pol) gene, partial cds 1255....a..............127394
EU362899.1 Hepatitis C virus isolate 1013q polyprotein (pol) gene, partial cds 2533__.............____252168
EU362900.1 Hepatitis C virus isolate 1030q polyprotein (pol) gene, partial cds 1254....a..............127294
EU362900.1 Hepatitis C virus isolate 1030q polyprotein (pol) gene, partial cds 2532__.............____252068
EU362901.1 Hepatitis C virus isolate 2011q polyprotein (pol) gene, complete cds 1216....a..............123494
EU362901.1 Hepatitis C virus isolate 2011q polyprotein (pol) gene, complete cds 2494__.............____248268
EU362902.1 Hepatitis C virus isolate 2027q polyprotein (pol) gene, partial cds 1254....a..............127294
EU362902.1 Hepatitis C virus isolate 2027q polyprotein (pol) gene, partial cds 2531___............____252063
EU362903.1 Hepatitis C virus isolate 4025q polyprotein (pol) gene, partial cds 1253....a..............127194
EU362903.1 Hepatitis C virus isolate 4025q polyprotein (pol) gene, partial cds 2531__.............____251968
EU362907.1 Hepatitis C virus isolate 7002q polyprotein (pol) gene, complete cds 1242....a..............126094
EU362907.1 Hepatitis C virus isolate 7002q polyprotein (pol) gene, complete cds 2520__.............____250868
EU363761.1 Recombinant Hepatitis C virus H77C/JFH1, complete genome 1293....a..............131194
EU363761.1 Recombinant Hepatitis C virus H77C/JFH1, complete genome 2571__.............____255968
EU239713.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V316/2001, complet1242....a..............126094
EU239713.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V316/2001, complet2519___............____250863
EU239714.2 Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V417/2001, complet1243..........c........126194
EU239715.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V423/2003, complet1220....a..............123894
EU239715.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V423/2003, complet2498__.............____248668
EU239716.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V431/2002, complet1211....a..............122994
EU239716.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V431/2002, complet2489__.............____247768
EU250017.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V508/2001, complet1211....a..............122994
EU250017.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V508/2001, complet2489__.............____247768
EU260396.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V11/2004, complete1197....a..............121594
EU260396.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V11/2004, complete2475__.............____246368
EU234063.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V177/1992, complet1215....g..............123394
EU234063.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V177/1992, complet2493__.............____248168
EU234064.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V182/1990, complet1208....a..............122694
EU234064.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V182/1990, complet2486__.............____247468
EU155213.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V101/2004, complet1223....a..............124194
EU155213.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V101/2004, complet2501__.............____248968
EU155214.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V104/2005, complet1220....a..............123894
EU155214.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V104/2005, complet2498__.............____248668
EU155215.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V105/2004, complet1189....a..............120794
EU155215.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V105/2004, complet2467__.............____245568
EU155216.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V115/2001, complet1214....a..............123294
EU155216.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V115/2001, complet2492__.............____248068
EU155228.2 Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V158/2003, complet1242..........c........126094
EU155229.2 Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V159/2004, complet1242..........c........126094
EU155233.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V445/2006, complet1221....a..............123994
EU155233.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V445/2006, complet2499__.............____248768
EU155235.2 Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V449/2006, complet1242....a..............126094
EU155236.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V450/2006, complet1185....g..............120394
EU155236.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V450/2006, complet2463__.............____245168
EU155237.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V457/2006, complet1235....a..............125394
EU155237.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V457/2006, complet2512___............____250163
EU155238.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V465/2007, complet1220....a..............123894
EU155238.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V465/2007, complet2498__.............____248668
EU155239.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V54/2004, complete1212....a..............123094
EU155239.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V54/2004, complete2490__.............____247868
EU155240.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V68/2004, complete1212....a..............123094
EU155240.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V68/2004, complete2490__.............____247868
EU155242.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V73/2004, complete1211....a..............122994
EU155243.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V86/2005, complete1189....g..............120794
EU155243.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V86/2005, complete2466___............____245563
EU155244.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V90/2005, complete1235....a..............125394
EU155244.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V90/2005, complete2513__.............____250168
EU155245.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V91/2003, complete1212....a..............123094
EU155245.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V91/2003, complete2490__.............____247868
EU155246.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V93/2003, complete1213....a..............123194
EU155246.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V93/2003, complete2491__.............____247968
EU482831.1 Hepatitis C virus subtype 1a isolate HCV-1a/DE/BID-V25/2003, complete1200....a..............121894
EU482831.1 Hepatitis C virus subtype 1a isolate HCV-1a/DE/BID-V25/2003, complete2478__.............____246668
EU482832.1 Hepatitis C virus subtype 1a isolate HCV-1a/DE/BID-V33/2004, complete1204....a..............122294
EU482832.1 Hepatitis C virus subtype 1a isolate HCV-1a/DE/BID-V33/2004, complete2482__.............____247068
EU482834.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V422/2002, complet1176....g..............119494
EU482834.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V422/2002, complet2454__.............____244268
EU482835.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V427/2002, complet1227....a..............124594
EU482835.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V427/2002, complet2505__.............____249368
EU482836.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V506/2002, complet1225....a..............124394
EU482836.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V506/2002, complet2503__.............____249168
EU482837.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V17/2004, complete1211....a..............122994
EU482837.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V17/2004, complete2489__.............____247768
EU482838.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V361/2006, complet1226....a..............124494
EU482838.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V361/2006, complet2507__.............____249568
EU482840.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V386/2004, complet1232....a..............125094
EU482840.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V386/2004, complet2510__.............____249868
EU482842.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V389/2006, complet1199....a..............121794
EU482842.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V389/2006, complet2477__.............____246568
EU482843.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V435/2005, complet1221....a..............123994
EU482843.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V435/2005, complet2498___............____248763
EU482844.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V436/2006, complet1228....g..............124694
EU482844.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V436/2006, complet2506__.............____249468
EU482845.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V438/2006, complet1227....a..............124594
EU482846.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V439/2000, complet1224....g..............124294
EU482846.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V439/2000, complet2501___............____249063
EU482847.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V5/2004, complete 1211....a..............122994
EU482847.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V5/2004, complete 2489__.............____247768
EU482848.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V9/2005, complete 1196....g..............121494
EU482848.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V9/2005, complete 2474__.............____246268
EU482850.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V186/1990, complet1189....a..............120794
EU482850.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V186/1990, complet2467__.............____245568
EU482852.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V217/1989, complet1211....a..............122994
EU482852.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V217/1989, complet2488___............____247763
EU482853.1 Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V227/2005, complet1213....a..............123194
EU482853.1 Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V227/2005, complet2491__.............____247968
EU482854.1 Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V242/2001, complet1211....a..............122994
EU482854.1 Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V242/2001, complet2489__.............____247768
EU482855.1 Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V249/2002, complet1205....a..............122394
EU482855.1 Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V249/2002, complet2483__.............____247168
EU482858.1 Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V271/2006, complet1218....g..............123694
EU482858.1 Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V271/2006, complet2496__.............____248468
EU482862.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V454/2006, complet1220....g..............123894
EU482862.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V454/2006, complet2498__.............____248668
EU482863.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V456/2006, complet1224....a..............124294
EU482863.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V456/2006, complet2502__.............____249068
EU482864.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V459/2006, complet1227....g..............124594
EU482864.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V459/2006, complet2505__.............____249368
EU482865.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V46/2003, complete1200....a..............121894
EU482865.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V46/2003, complete2478__.............____246668
EU482866.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V460/2006, complet1227....g..............124594
EU482866.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V460/2006, complet2505__.............____249368
EU482867.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V461/2006, complet1227....a..............124594
EU482868.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V69/2002, complete1211....a..............122994
EU482868.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V69/2002, complete2489__.............____247768
EU482870.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V75/2004, complete1235....a..............125394
EU482870.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V75/2004, complete2513__.............____250168
EU482871.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V77/2002, complete1203....a..............122194
EU482871.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V77/2002, complete2481__.............____246968
EU482872.1 Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V261/2004, complet1220....a..............123894
EU482872.1 Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V261/2004, complet2504__.............____249268
EU482873.1 Hepatitis C virus subtype 1a isolate HCV-1a/DE/BID-V28/2003, complete1205....a..............122394
EU482873.1 Hepatitis C virus subtype 1a isolate HCV-1a/DE/BID-V28/2003, complete2483__.............____247168
EU482874.1 Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V287/2005, complet1242....c..............126094
EU482876.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V330/2002, complet1220....a..............123894
EU482876.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V330/2002, complet2507__.............____249568
EU482877.1 Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V342/2001, complet1242..........c........126094
EU482878.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V19/2004, complete1220....a..............123894
EU482878.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V19/2004, complete2498__.............____248668
EU482880.1 Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V373/2006, complet1242..........c........126094
EU482882.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V410/2006, complet1204....a..............122294
EU482882.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V410/2006, complet2494__.............____248268
EU482884.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V38/2004, complete978....a..............99694
EU482884.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V38/2004, complete2262__.............____225068
EU482887.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V66/2002, complete1189....a..............120794
EU482887.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V66/2002, complete2468__.............____245668
EU482889.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V179/1990, complet1221....a..............123994
EU482889.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V179/1990, complet2505__.............____249368
EU155247.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V1/2005, complete 1218....a..............123694
EU155247.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V1/2005, complete 2496__.............____248468
EU155248.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V336/2006, complet1212....a..............123094
EU155248.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V336/2006, complet2490__.............____247868
EU155249.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V337/2006, complet1211....a..............122994
EU155249.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V337/2006, complet2489__.............____247768
EU155250.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V358/2006, complet1219....a..............123794
EU155250.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V358/2006, complet2497__.............____248568
EU155251.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V359/2006, complet1205....a..............122394
EU155251.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V359/2006, complet2483__.............____247168
EU155252.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V362/2006, complet1211....g..............122994
EU155252.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V362/2006, complet2489__.............____247768
EU155256.2 Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V367/2006, complet1242....c..............126094
EU155261.2 Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V379/2005, complet1243..........c........126194
EU155265.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V388/2005, complet1214....a..............123294
EU155265.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V388/2005, complet2492__.............____248068
EU155266.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V390/2006, complet1163....a..............118194
EU155266.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V390/2006, complet2441__.............____242968
EU155267.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V391/2006, complet1200....a..............121894
EU155267.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V391/2006, complet2478__.............____246668
EU155268.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V396/2006, complet1189....a..............120794
EU155268.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V396/2006, complet2467__.............____245568
EU155269.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V398/2006, complet1213....a..............123194
EU155269.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V398/2006, complet2491__.............____247968
EU155270.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V399/2006, complet1211....a..............122994
EU155270.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V399/2006, complet2489__.............____247768
EU155271.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V401/2006, complet1216....a..............123494
EU155271.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V401/2006, complet2494__.............____248268
EU155272.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V404/2006, complet1190....a..............120894
EU155272.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V404/2006, complet2468__.............____245668
EU155273.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V406/2006, complet1163....a..............118194
EU155273.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V406/2006, complet2441__.............____242968
EU155274.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V407/2006, complet1165....a..............118394
EU155274.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V407/2006, complet2443__.............____243168
EU155275.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V409/2006, complet1214....g..............123294
EU155275.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V409/2006, complet2492__.............____248068
EU155276.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V432/2002, complet1213....a..............123194
EU155276.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V432/2002, complet2491__.............____247968
EU155277.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V434/2003, complet1189....a..............120794
EU155277.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V434/2003, complet2467__.............____245568
EU155278.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V437/2006, complet1204....a..............122294
EU155278.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V437/2006, complet2482__.............____247068
EU155282.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V696/2006, complet1211....a..............122994
EU155283.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V698/2006, complet1227....a..............124594
EU155283.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V698/2006, complet2505__.............____249368
EU155284.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V317/2001, complet1228....a..............124694
EU155284.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V317/2001, complet2506__.............____249468
EU155285.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V318/2001, complet1202....a..............122094
EU155285.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V318/2001, complet2480__.............____246868
EU155286.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V319/2001, complet1189....a..............120794
EU155286.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V319/2001, complet2467__.............____245568
EU155287.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V320/2001, complet1249....a..............126794
EU155287.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V320/2001, complet2526___............____251563
EU155288.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V322/2002, complet1211....a..............122994
EU155288.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V322/2002, complet2489__.............____247768
EU155289.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V323/2001, complet1220....a..............123894
EU155289.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V323/2001, complet2498__.............____248668
EU155290.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V325/2001, complet1199....a..............121794
EU155290.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V325/2001, complet2476___............g.._246273
EU155291.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V326/2002, complet1213....a..............123194
EU155291.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V326/2002, complet2491__.............____247968
EU155292.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V327/2001, complet1221....a..............123994
EU155292.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V327/2001, complet2499__.............____248768
EU155293.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V328/2001, complet1164....a..............118294
EU155293.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V328/2001, complet2442__.............____243068
EU155295.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V331/2002, complet1213....a..............123194
EU155296.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V332/2002, complet1210....a..............122894
EU155296.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V332/2002, complet2488__.............____247668
EU155297.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V333/2002, complet1210....a..............122894
EU155297.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V333/2002, complet2488__.............____247668
EU155298.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V334/2002, complet1224....a..............124294
EU155298.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V334/2002, complet2502__.............____249068
EU155299.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V335/2003, complet1210....a..............122894
EU155299.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V335/2003, complet2491__.............____247968
EU155309.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V356/2003, complet1209....a..............122794
EU155309.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V356/2003, complet2487__.............____247568
EU155310.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V357/2004, complet1209....g..............122794
EU155310.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V357/2004, complet2487__.............____247568
EU155311.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V411/2003, complet1220....a..............123894
EU155311.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V411/2003, complet2498__.............____248668
EU155312.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V412/2000, complet1202....a..............122094
EU155312.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V412/2000, complet2480__.............____246868
EU155313.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V413/2003, complet1202....a..............122094
EU155313.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V413/2003, complet2480__.............____246868
EU155314.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V414/2004, complet1168....a..............118694
EU155314.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V414/2004, complet2446__.............____243468
EU155316.2 Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V419/2002, complet1242....c..............126094
EU155319.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V424/2002, complet1172....a..............119094
EU155319.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V424/2002, complet2450__.............____243868
EU155320.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V425/2001, complet1165....a..............118394
EU155320.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V425/2001, complet2443__.............____243168
EU155321.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V426/2001, complet1168....a..............118694
EU155321.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V426/2001, complet2445___............____243463
EU155322.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V428/2001, complet1208....a..............122694
EU155323.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V429/2002, complet1205....a..............122394
EU155323.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V429/2002, complet2483__.............____247168
EU155333.2 Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V133/1989, complet1231....c..............124994
EU155334.2 Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V134/1990, complet1242....c..............126094
EU155337.2 Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V141/1990, complet1242....c..............126094
EU155338.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V169/1996, complet1212....a..............123094
EU155338.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V169/1996, complet2490__.............____247868
EU155339.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V172/1990, complet1189....a..............120794
EU155340.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V185/1991, complet1189....a..............120794
EU155340.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V185/1991, complet2467__.............____245568
EU155341.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V192/1992, complet1222....a..............124094
EU155341.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V192/1992, complet2500__.............____248868
EU155342.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V197/1989, complet1189....a..............120794
EU155342.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V197/1989, complet2467__.............____245568
EU155343.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V214/1996, complet1213....a..............123194
EU155343.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V214/1996, complet2491__.............____247968
EU155344.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V216/1990, complet1200....a..............121894
EU155344.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V216/1990, complet2478__.............____246668
EU155346.2 Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V236/2005, complet1216....a..............123494
EU155346.2 Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V236/2005, complet2494__.............____248268
EU155348.2 Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V240/2005, complet1203....g..............122194
EU155348.2 Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V240/2005, complet2481__.............____246968
EU155349.2 Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V246/2005, complet1201....a..............121994
EU155349.2 Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V246/2005, complet2479__.............____246768
EU155351.2 Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V257/2003, complet1215....a..............123394
EU155351.2 Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V257/2003, complet2493__.............____248168
EU155352.2 Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V262/2004, complet1220....a..............123894
EU155352.2 Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V262/2004, complet2498__.............____248668
EU155353.2 Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V267/2005, complet1212....a..............123094
EU155353.2 Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V267/2005, complet2490__.............____247868
EU155354.2 Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V269/2005, complet1219....a..............123794
EU155354.2 Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V269/2005, complet2496___............____248563
EU155355.2 Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V270/2006, complet1218....a..............123694
EU155362.2 Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V282/2004, complet1242....c..............126094
EU155364.2 Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V288/2006, complet1242....c..............126094
EU155366.2 Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V294/2002, complet1242....c..............126094
EU155375.2 Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V309/2006, complet1242....a..............126094
EU155376.2 Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V311/2006, complet1242....c..............126094
EU155378.2 Hepatitis C virus subtype 1a isolate HCV-1a/DE/BID-V26/2003, complete1151....a..............116994
EU155378.2 Hepatitis C virus subtype 1a isolate HCV-1a/DE/BID-V26/2003, complete2429__.............____241768
EU155380.2 Hepatitis C virus subtype 1a isolate HCV-1a/DE/BID-V35/2004, complete1199....a..............121794
EU155380.2 Hepatitis C virus subtype 1a isolate HCV-1a/DE/BID-V35/2004, complete2477__.............____246568
EU155382.2 Hepatitis C virus subtype 1b isolate HCV-1b/DE/BID-V504/2003, complet1248....g..............126694
EU234065.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V212/1990, complet1189....a..............120794
EU234065.2 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V212/1990, complet2466___............____245563
AB426117.1 Hepatitis C virus subtype 1b genomic RNA, complete genome, hiroshima 1294....c..............131294
EU529676.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V39/2004, complete1226....a..............124494
EU529676.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V39/2004, complete2503___............____249263
EU529677.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V52/2006, complete1222....a..............124094
EU529677.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V52/2006, complete2500__.............____248868
EU529678.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V63/2005, complete1208....a..............122694
EU529678.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V63/2005, complete2486__.............____247468
EU529679.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V76/2002, complete1207....a..............122594
EU529680.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V80/2002, complete1225....a..............124394
EU529680.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V80/2002, complete2509__.............____249768
EU529681.1 Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V251/2005, complet1210....a..............122894
EU569722.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V215/1989, complet1228....a..............124694
EU569722.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V215/1989, complet2506__.............____249468
EU569723.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V13/2005, complete1213....a..............123194
EU569723.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V13/2005, complete2491__.............____247968
EU595697.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V507/2001, complet1210....a..............122894
EU595697.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V507/2001, complet2488__.............____247668
EU595698.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V44/2001, complete1211....a..............122994
EU595698.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V44/2001, complete2489__.............____247768
EU595699.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V78/2001, complete1203....a..............122194
EU595699.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V78/2001, complete2402__.............____239068
EU408327.1 Hepatitis C virus isolate 535318 polyprotein precursor, gene, complet1291....a..............130994
AB435162.2 Hepatitis C virus subtype 1b genomic RNA, complete genome, hiroshima 1294....c..............131294
EU660383.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V100/2004, complet1220....a..............123894
EU660383.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V100/2004, complet2498__.............____248668
EU660384.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V55/2005, complete1242....a..............126094
EU660385.1 Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V258/2003, complet1203....a..............122194
EU660385.1 Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V258/2003, complet2481__.............____246968
EU687194.1 Hepatitis C virus subtype 1a isolate HCV-1a/DE/BID-V1563/2004, comple1221....g..............123994
EU687194.1 Hepatitis C virus subtype 1a isolate HCV-1a/DE/BID-V1563/2004, comple2499__.............____248768
EU687195.1 Hepatitis C virus subtype 1a isolate HCV-1a/DE/BID-V1564/2007, comple1228....a..............124694
EU687195.1 Hepatitis C virus subtype 1a isolate HCV-1a/DE/BID-V1564/2007, comple2506__.............____249468
EU255927.1 Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V222/2003, complet1215....a..............123394
EU255928.1 Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V231/2003, complet1220....a..............123894
EU255928.1 Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V231/2003, complet2498__.............____248668
EU255929.1 Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V233/2004, complet1220....a..............123894
EU255929.1 Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V233/2004, complet2498__.............____248668
EU255930.1 Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V237/2005, complet1220....a..............123894
EU255930.1 Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V237/2005, complet2498__.............____248668
EU255931.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V108/2003, complet1220....g..............123894
EU255931.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V108/2003, complet2498__.............____248668
EU255932.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V111/2005, complet1220....a..............123894
EU255932.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V111/2005, complet2498__.............____248668
EU255933.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V112/2003, complet1202....g..............122094
EU255933.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V112/2003, complet2480__.............____246868
EU255934.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V453/2006, complet1228....a..............124694
EU255934.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V453/2006, complet2505___............____249463
EU255935.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V462/2007, complet1224....a..............124294
EU255936.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V510/2006, complet1221....a..............123994
EU255936.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V510/2006, complet2499__.............____248768
EU255937.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V700/2006, complet1211....a..............122994
EU255937.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V700/2006, complet2489__.............____247768
EU255938.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V88/2003, complete1226....a..............124494
EU255938.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V88/2003, complete2504__.............____249268
EU255939.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V408/2006, complet1213....a..............123194
EU255940.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V433/2006, complet1227....a..............124594
EU255940.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V433/2006, complet2505__.............____249368
EU255941.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V697/2006, complet1226....a..............124494
EU255941.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V697/2006, complet2504__.............____249268
EU255942.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V699/2007, complet1226....a..............124494
EU255942.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V699/2007, complet2504__.............____249268
EU255943.1 Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V223/2003, complet1213....a..............123194
EU255943.1 Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V223/2003, complet2491__.............____247968
EU255944.1 Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V224/2003, complet1196....a..............121494
EU255944.1 Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V224/2003, complet2474__.............____246268
EU255945.1 Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V225/2004, complet1213....a..............123194
EU255945.1 Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V225/2004, complet2491__.............____247968
EU255946.1 Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V226/2005, complet1221....g..............123994
EU255946.1 Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V226/2005, complet2499__.............____248768
EU255947.1 Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V228/2006, complet1227....g..............124594
EU255947.1 Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V228/2006, complet2505__.............____249368
EU255948.1 Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V230/2003, complet1222....a..............124094
EU255948.1 Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V230/2003, complet2500__.............____248868
EU255949.1 Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V235/2005, complet1220....a..............123894
EU255950.1 Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V241/2005, complet1212....a..............123094
EU255950.1 Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V241/2005, complet2490__.............____247868
EU255951.1 Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V245/2005, complet1226....a..............124494
EU255951.1 Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V245/2005, complet2504__.............____249268
EU255952.1 Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V247/2005, complet1215....g..............123394
EU255952.1 Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V247/2005, complet2493__.............____248168
EU255953.1 Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V248/2006, complet1217....a..............123594
EU255953.1 Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V248/2006, complet2494___............____248363
EU255954.1 Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V252/2002, complet1219....g..............123794
EU255954.1 Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V252/2002, complet2497__.............____248568
EU255955.1 Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V254/2002, complet1203....a..............122194
EU255955.1 Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V254/2002, complet2481__.............____246968
EU255956.1 Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V259/2003, complet1221....a..............123994
EU255957.1 Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V260/2004, complet1242....a..............126094
EU255957.1 Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V260/2004, complet2520__.............____250868
EU255958.1 Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V265/2005, complet1220....g..............123894
EU255958.1 Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V265/2005, complet2498__.............____248668
EU255959.1 Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V268/2003, complet1187....a..............120594
EU255959.1 Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V268/2003, complet2465__.............____245368
EU256060.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V360/2006, complet1214....a..............123294
EU256060.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V360/2006, complet2491___............____248063
EU256061.1 Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V364/2006, complet1242..........c........126094
EU256065.1 Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V377/2006, complet1242....g..............126094
EU256066.1 Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V382/2003, complet1243..........c........126194
EU256067.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V402/2006, complet1221....a..............123994
EU256067.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V402/2006, complet2499__.............____248768
EU256068.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V405/2006, complet1214....a..............123294
EU256068.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V405/2006, complet2492__.............____248068
EU256086.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V110/2003, complet1192....a..............121094
EU256086.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V110/2003, complet2470__.............____245868
EU256087.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V114/2001, complet1189....a..............120794
EU256087.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V114/2001, complet2467__.............____245568
EU256090.1 Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V162/2002, complet1242....c..............126094
EU256092.1 Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V463/2006, complet1242..........c........126094
EU256094.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V74/2004, complete1221....a..............123994
EU256094.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V74/2004, complete2499__.............____248768
EU256095.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V81/2002, complete1224....a..............124294
EU256095.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V81/2002, complete2502__.............____249068
EU256104.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V430/2005, complet1211....a..............122994
EU256104.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V430/2005, complet2488___............____247763
EU256106.1 Hepatitis C virus subtype 1a isolate HCV-1a/DE/BID-V32/2004, complete1212....a..............123094
EU256106.1 Hepatitis C virus subtype 1a isolate HCV-1a/DE/BID-V32/2004, complete2490__.............____247868
EU256107.1 Hepatitis C virus subtype 1a isolate HCV-1a/DE/BID-V36/2004, complete1221....g..............123994
EU256107.1 Hepatitis C virus subtype 1a isolate HCV-1a/DE/BID-V36/2004, complete2499__.............____248768
EU155347.2 Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V239/2005, complet1205....g..............122394
EU155347.2 Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V239/2005, complet2483__.............____247168
EU255993.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V102/2004, complet1220....a..............123894
EU255993.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V102/2004, complet2497___............____248663
EU255996.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V107/2003, complet1225....a..............124394
EU255996.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V107/2003, complet2503__.............____249168
EU255997.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V109/2003, complet1191....a..............120994
EU255997.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V109/2003, complet2469__.............____245768
EU255998.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V113/2001, complet1221....a..............123994
EU255998.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V113/2001, complet2499__.............____248768
EU255999.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V116/2002, complet1207....a..............122594
EU255999.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V116/2002, complet2485__.............____247368
EU256002.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V41/2006, complete1235....g..............125394
EU256003.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V444/2006, complet1227....a..............124594
EU256003.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V444/2006, complet2505__.............____249368
EU256004.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V45/2005, complete1201....g..............121994
EU256004.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V45/2005, complete2479__.............____246768
EU256005.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V451/2006, complet1222....a..............124094
EU256005.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V451/2006, complet2500__.............____248868
EU256006.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V452/2006, complet1228....a..............124694
EU256006.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V452/2006, complet2506__.............____249468
EU256007.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V464/2006, complet1210....a..............122894
EU256007.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V464/2006, complet2488__.............____247668
EU256008.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V47/2002, complete1189....a..............120794
EU256008.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V47/2002, complete2467__.............____245568
EU256009.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V49/2004, complete1207....a..............122594
EU256009.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V49/2004, complete2485__.............____247368
EU256010.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V50/2002, complete1189....a..............120794
EU256010.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V50/2002, complete2467__.............____245568
EU256011.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V51/2004, complete1189....a..............120794
EU256011.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V51/2004, complete2467__.............____245568
EU256012.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V511/2006, complet1228....a..............124694
EU256012.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V511/2006, complet2506__.............____249468
EU256013.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V53/2004, complete1218....a..............123694
EU256013.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V53/2004, complete2495___............____248463
EU256014.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V56/2004, complete1189....a..............120794
EU256014.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V56/2004, complete2467__.............____245568
EU256015.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V57/2004, complete1212....a..............123094
EU256015.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V57/2004, complete2490__.............____247868
EU256017.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V59/2005, complete1216....g..............123494
EU256017.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V59/2005, complete2494__.............____248268
EU256018.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V60/2002, complete1209....g..............122794
EU256018.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V60/2002, complete2487__.............____247568
EU256019.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V61/2001, complete1216....a..............123494
EU256019.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V61/2001, complete2494__.............____248268
EU256020.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V62/2003, complete1218....a..............123694
EU256020.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V62/2003, complete2505__.............____249368
EU256021.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V64/2003, complete1212....a..............123094
EU256021.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V64/2003, complete2490__.............____247868
EU256022.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V65/2003, complete1211....g..............122994
EU256022.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V65/2003, complete2489__.............____247768
EU256023.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V67/2003, complete1220....a..............123894
EU256023.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V67/2003, complete2498__.............____248668
EU256024.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V72/2006, complete1189....a..............120794
EU256025.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V79/2002, complete1190....a..............120894
EU256025.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V79/2002, complete2468__.............____245668
EU256026.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V82/2002, complete1225....a..............124394
EU256026.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V82/2002, complete2503__.............____249168
EU256027.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V83/2003, complete1227....g..............124594
EU256028.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V84/2001, complete1220....a..............123894
EU256028.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V84/2001, complete2498__.............____248668
EU256029.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V85/2001, complete1207....g..............122594
EU256029.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V85/2001, complete2485__.............____247368
EU256030.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V87/2002, complete1203....a..............122194
EU256030.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V87/2002, complete2481__.............____246968
EU256031.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V89/2006, complete1218....a..............123694
EU256031.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V89/2006, complete2496__.............____248468
EU256032.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V92/2003, complete1218....a..............123694
EU256032.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V92/2003, complete2496__.............____248468
EU256033.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V94/2005, complete1221....g..............123994
EU256033.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V94/2005, complete2499__.............____248768
EU256034.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V95/2006, complete1221....a..............123994
EU256034.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V95/2006, complete2502__.............____249068
EU256035.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V96/2004, complete1220....a..............123894
EU256035.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V96/2004, complete2498__.............____248668
EU256036.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V97/2004, complete1220....g..............123894
EU256036.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V97/2004, complete2498__.............____248668
EU256037.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V98/2004, complete1227....a..............124594
EU256037.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V98/2004, complete2505__.............____249368
EU256038.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V99/2004, complete1225....a..............124394
EU256038.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V99/2004, complete2502___............gc..248773
EU256039.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V16/2004, complete1213....a..............123194
EU256039.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V16/2004, complete2491__.............____247968
EU256040.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V18/2004, complete1220....a..............123894
EU256040.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V18/2004, complete2498__.............____248668
EU256041.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V2/2005, complete 1225....a..............124394
EU256041.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V2/2005, complete 2502___............____249163
EU256043.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V3/2005, complete 1189....a..............120794
EU256043.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V3/2005, complete 2467__.............____245568
EU256044.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V378/2001, complet1199....a..............121794
EU256044.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V378/2001, complet2477__.............____246568
EU256046.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V392/2006, complet1220....a..............123894
EU256046.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V392/2006, complet2498__.............____248668
EU256047.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V393/2006, complet1220....a..............123894
EU256047.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V393/2006, complet2498__.............____248668
EU256048.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V394/2006, complet1220....a..............123894
EU256048.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V394/2006, complet2498__.............____248668
EU256049.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V395/2006, complet1220....a..............123894
EU256049.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V395/2006, complet2498__.............____248668
EU256050.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V397/2006, complet1221....a..............123994
EU256050.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V397/2006, complet2499__.............____248768
EU256051.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V4/2005, complete 1216....a..............123494
EU256051.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V4/2005, complete 2494__.............____248268
EU256052.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V403/2006, complet1219....g..............123794
EU256052.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V403/2006, complet2497__.............____248568
EU256053.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V440/2001, complet1221....a..............123994
EU256053.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V440/2001, complet2499__.............____248768
EU256055.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V6/2001, complete 1216....a..............123494
EU256055.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V6/2001, complete 2494__.............____248268
EU256056.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V7/2003, complete 1191....a..............120994
EU256056.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V7/2003, complete 2469__.............____245768
EU256057.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V702/2006, complet1228....g..............124694
EU256057.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V702/2006, complet2506__.............____249468
EU256058.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V8/2005, complete 1206....a..............122494
EU256058.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V8/2005, complete 2484__.............____247268
EU256069.1 Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V229/2006, complet1201....a..............121994
EU256069.1 Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V229/2006, complet2479__.............____246768
EU256070.1 Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V232/2003, complet1213....a..............123194
EU256070.1 Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V232/2003, complet2491__.............____247968
EU256071.1 Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V234/2004, complet1189....a..............120794
EU256071.1 Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V234/2004, complet2467__.............____245568
EU256074.1 Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V264/2005, complet1218....a..............123694
EU256080.1 Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V292/2002, complet1242....c..............126094
EU255963.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V166/1992, complet1221....a..............123994
EU255963.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V166/1992, complet2498___............____248763
EU255964.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V167/1992, complet1204....a..............122294
EU255964.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V167/1992, complet2482__.............____247068
EU255965.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V168/1990, complet1218....a..............123694
EU255965.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V168/1990, complet2496__.............____248468
EU255966.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V170/1997, complet1225....a..............124394
EU255966.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V170/1997, complet2503__.............____249168
EU255967.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V171/1997, complet1199....a..............121794
EU255967.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V171/1997, complet2477__.............____246568
EU255968.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V173/1989, complet1204....a..............122294
EU255968.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V173/1989, complet2481___............____247063
EU255969.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V174/1992, complet1216....a..............123494
EU255969.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V174/1992, complet2494__.............____248268
EU255970.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V176/1992, complet1212....a..............123094
EU255970.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V176/1992, complet2490__.............____247868
EU255973.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V180/1990, complet1215....a..............123394
EU255973.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V180/1990, complet2493__.............____248168
EU255974.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V181/1992, complet1218....a..............123694
EU255974.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V181/1992, complet2496__.............____248468
EU255975.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V183/1994, complet1219....a..............123794
EU255975.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V183/1994, complet2497__.............____248568
EU255976.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V184/1992, complet1215....a..............123394
EU255976.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V184/1992, complet2493__.............____248168
EU255977.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V187/1991, complet1219....a..............123794
EU255977.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V187/1991, complet2497__.............____248568
EU255978.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V188/1991, complet1208....g..............122694
EU255978.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V188/1991, complet2486__.............____247468
EU255979.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V189/1991, complet1221....a..............123994
EU255979.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V189/1991, complet2499__.............____248768
EU255980.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V190/1990, complet1212....a..............123094
EU255980.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V190/1990, complet2490__.............____247868
EU255982.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V194/1990, complet1218....a..............123694
EU255982.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V194/1990, complet2496__.............____248468
EU255983.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V195/1990, complet1213....a..............123194
EU255983.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V195/1990, complet2491__.............____247968
EU255984.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V200/1990, complet1206....a..............122494
EU255984.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V200/1990, complet2484__.............____247268
EU255985.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V201/1991, complet1223....a..............124194
EU255985.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V201/1991, complet2501__.............____248968
EU255986.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V203/1989, complet1221....a..............123994
EU255986.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V203/1989, complet2499__.............____248768
EU255987.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V205/1989, complet1202....a..............122094
EU255987.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V205/1989, complet2479___............____246863
EU255988.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V206/1995, complet1210....a..............122894
EU255988.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V206/1995, complet2488__.............____247668
EU255989.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V208/1990, complet1227....a..............124594
EU255989.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V208/1990, complet2505__.............____249368
EU255990.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V209/1992, complet1219....a..............123794
EU255990.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V209/1992, complet2497__.............____248568
EU255991.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V210/1989, complet1209....a..............122794
EU255991.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V210/1989, complet2487__.............____247568
EU255992.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V213/1992, complet1215....a..............123394
EU255992.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V213/1992, complet2492___............____248163
EU857431.1 Hepatitis C virus subtype 1b isolate Whu, complete genome 1294................a..131294
FJ024087.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V1705/2007, comple1221....a..............123994
FJ024274.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V1707/2007, comple1147....g..............116594
FJ024274.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V1707/2007, comple2425__.............____241368
FJ024275.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V1708/2007, comple1186....a..............120494
FJ024275.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V1708/2007, comple2464__.............____245268
FJ024276.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V1710/2007, comple1186....a..............120494
FJ024276.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V1710/2007, comple2464__.............____245268
FJ024278.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V1713/2007, comple1188....a..............120694
FJ024278.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V1713/2007, comple2466__.............____245468
FJ024281.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V1718/2007, comple1218....a..............123694
FJ024281.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V1718/2007, comple2495___............____248463
FJ024282.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V1719/2005, comple1206....a..............122494
EU862823.1 Hepatitis C virus subtype 1a isolate HCV-1a/DE/BID-V24/2003, complete1199....g..............121794
EU862823.1 Hepatitis C virus subtype 1a isolate HCV-1a/DE/BID-V24/2003, complete2477__.............____246568
EU862824.1 Hepatitis C virus subtype 1a isolate HCV-1a/DE/BID-V31/2004, partial 1211....a..............122994
EU862824.1 Hepatitis C virus subtype 1a isolate HCV-1a/DE/BID-V31/2004, partial 2489__.............____247768
EU862826.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V198/1989, partial1211....a..............122994
EU862826.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V198/1989, partial2489__.............____247768
EU862827.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V218/1993, partial1211....a..............122994
EU862827.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V218/1993, partial2488___............____247763
FJ181999.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V1706/2007, comple1205....g..............122394
FJ181999.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V1706/2007, comple2483__.............____247168
FJ182000.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V1712/2007, comple1188....a..............120694
FJ182000.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V1712/2007, comple2466__.............____245468
FJ182001.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V1716/2007, comple1212....a..............123094
FJ182001.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V1716/2007, comple2490__.............____247868
FJ205867.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V1709/2007, comple1242....a..............126094
FJ205867.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V1709/2007, comple2532__.............____252068
FJ205868.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V1714/2007, comple1198....a..............121694
FJ205868.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V1714/2007, comple2476__.............____246468
FJ205869.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V1720/2006, comple1188....a..............120694
FJ205869.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V1720/2006, comple2466__.............____245468
FJ390394.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V1745/2008, comple1204....a..............122294
FJ390394.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V1745/2008, comple2481___............____247063
FJ390395.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V1747/2008, comple1181....a..............119994
FJ390395.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V1747/2008, comple2459__.............____244768
FJ390396.1 Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V1748/2007, comple1242....a..............126094
FJ390398.1 Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V1750/2008, comple1242....c..............126094
FJ390399.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V1751/2007, comple1165....a..............118394
FJ390399.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V1751/2007, comple2443__.............____243168
FJ410172.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V1746/2008, comple1188....a..............120694
FJ410172.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V1746/2008, comple2466__.............____245468
EU781804.1 Hepatitis C virus subtype 1a isolate 02-46, complete genome 1209....a..............122794
EU781804.1 Hepatitis C virus subtype 1a isolate 02-46, complete genome 2486___............g.._247273
EU781823.1 Hepatitis C virus subtype 1a isolate 03-12, complete genome 1217....a..............123594
EU781823.1 Hepatitis C virus subtype 1a isolate 03-12, complete genome 2495__.............____248368
EU643834.1 Hepatitis C virus isolate HCV-6-D140 polyprotein gene, complete cds 1018..........c........103694
EU643836.1 Hepatitis C virus isolate HCV-6-D370 polyprotein gene, complete cds 1018..........c........103694
FJ478453.1 Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V2148/1999, comple1242....g..............126094
AB442219.1 Hepatitis C virus subtype 1b genomic RNA, complete genome, clone: 1B-1294....c..............131294
AB442222.1 Hepatitis C virus subtype 1b genomic RNA, complete genome, clone: 1B-1294....c..............131294
FJ462431.1 Hepatitis C virus isolate QC139, complete genome 1293..........c........131194
FJ462433.1 Hepatitis C virus isolate QC249, complete genome 1294..........c........131294
FJ462437.1 Hepatitis C virus isolate QC382, complete genome 1293..........c........131194
GQ149768.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V2147/2002, comple1205....a..............122394
GQ149768.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V2147/2002, comple2482___............____247163
FJ839869.1 Hepatitis C virus isolate QC155, complete genome 1293....c..............131194
FJ839870.1 Hepatitis C virus isolate QC274, complete genome 1293..........c........131194
AB520610.1 Hepatitis C virus subtype 1a genomic RNA, complete genome, strain: HC1294....g..............131294
AB520610.1 Hepatitis C virus subtype 1a genomic RNA, complete genome, strain: HC2572__.............____256068
FJ821465.1 Hepatitis C virus strain M21-2k/1b, complete genome 1268....a..............128694
EU862828.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V12/2004, complete1227....a..............124594
EU862828.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V12/2004, complete2505__.............____249368
EU862832.1 Hepatitis C virus subtype 1a isolate HCV-1a/DE/BID-V27/2003, complete1208....a..............122694
EU862832.1 Hepatitis C virus subtype 1a isolate HCV-1a/DE/BID-V27/2003, complete2485___............____247463
EU862834.1 Hepatitis C virus subtype 1a isolate HCV-1a/DE/BID-V37/2004, complete1139....a..............115794
EU862834.1 Hepatitis C virus subtype 1a isolate HCV-1a/DE/BID-V37/2004, complete2416___............____240563
EU862836.1 Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V244/2003, complet1220....a..............123894
EU862836.1 Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V244/2003, complet2498__.............____248668
EU862838.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V165/1992, complet1231....a..............124994
EU862838.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V165/1992, complet2508__.............____249668
EU862839.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V175/1990, complet1222....a..............124094
EU862839.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V175/1990, complet2500__.............____248868
EU862841.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V48/2003, complete1209....a..............122794
EU862841.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V48/2003, complete2487__.............____247568
HM777359.1 Hepatitis C virus isolate C1292 genotype 2j, complete genome 1213....g..............123194
AF009606.1 Hepatitis C virus subtype 1a polyprotein gene, complete cds 1294....a..............131294
AF009606.1 Hepatitis C virus subtype 1a polyprotein gene, complete cds 2572__.............____256068
M67463.1HPCCGAA Hepatitis C virus subtype 1a, complete genome 1294....a...a..........131289
M67463.1HPCCGAA Hepatitis C virus subtype 1a, complete genome 2572__.............____256068
EU643835.1 Hepatitis C virus isolate HCV-6-D177 polyprotein gene, complete cds 1018..........c......c.103689
EF407438.1 Hepatitis C virus isolate 7012 polyprotein gene, complete cds 2519__.............____250768
EF407450.1 Hepatitis C virus isolate 6020 polyprotein gene, complete cds 2490__.............____247868
EU362887.1 Hepatitis C virus isolate 6020_FU24 polyprotein (pol) gene, complete 2490__.............____247868
EU362892.1 Hepatitis C virus isolate 7012_FU24 polyprotein (pol) gene, complete 2517__.............____250568
EU482841.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V387/2004, complet2505__.............____249368
EU482861.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V446/2006, complet2498__.............____248668
EU660387.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V701/2003, complet2489__.............____247768
EU687193.1 Hepatitis C virus subtype 1a isolate HCV-1a/DE/BID-V1562/2005, comple2467__.............____245568
EU256096.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V321/2001, complet2492__.............____248068
EU256097.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V324/2001, complet2498__.............____248668
EU256105.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V505/2001, complet2522__.............____251068
EU255994.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V103/2005, complet2482__.............____247068
EU255981.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V191/1990, complet2505__.............____249368
EU781824.1 Hepatitis C virus subtype 1a isolate DN14, complete genome 2479__.............____246768
EU862831.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V400/2006, complet2490__.............____247868
EU482857.1 Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V263/2005, complet2488___............____247763
EU255995.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V106/2004, complet2496___............____248563
AM910652.2 Hepatitis C virus subtype 1g complete genome 1345____............___135663
FJ024280.1 Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V1717/2007, comple2480___............____246963