../../tmp/servers/virsirnadb/1053644706
Result for your query siRNA sequence
RED =100 % Complementary sequence
.=Identical residue
blue alphabets=mismatch
_=Gap


Acc numberStrain nameStartAlignmentEnd% Identity
Queryvirsi20511ttcctccttgctgaggttc19
X04451.1 Hepatitis delta virus (HDV) RNA genome 1220...................1238100
M55042.1HPDAG Hepatitis D virus delta antigen (HDAg) mRNA, complete cds 1221...................1239100
M21012.1HPDGEN Hepatitis delta virus RNA, complete genome 1221...................1239100
AJ000558.1 Hepatitis D Virus complete genome 1220...................1238100
AF098261.1AF098261 Hepatitis D virus from Canada, complete genome 1214...................1232100
AJ307077.1 Hepatitis delta virus complete genome, isolate W5 1221...................1239100
HM046802.1 Hepatitis delta virus isolate JN, complete genome 1219...................1237100
GU177114.1 Hepatitis delta virus isolate HDV-DN79, complete genome 1220...................1238100
GU177114.1 Hepatitis delta virus isolate HDV-DN79, complete genome 35_........._________2747
NC_001653.2 Hepatitis delta virus, complete genome 1224_..................124194
U81988.1HDU81988 Hepatitis delta virus from Somalia genotype IC, complete geno1217_..................123494
AM779578.1 Hepatitis delta virus dFr2239b LHD gene for large HD antigen, genomic1224_..................124194
AM779579.1 Hepatitis delta virus dFr2395 LHD gene for large HD antigen, genomic 1223_..................124094
AM779587.1 Hepatitis delta virus dTk7 LHD gene for large HD antigen, genomic RNA1223_..................124094
AM779592.1 Hepatitis delta virus dTk8 LHD gene for large HD antigen, genomic RNA1218_..................123594
AM779594.1 Hepatitis delta virus dTk27 LHD gene for large HD antigen, genomic RN1224_..................124194
AM902164.1 Hepatitis delta virus dFr2137 LHD gene for large HD antigen, genomic 1222_..................123994
AM902165.1 Hepatitis delta virus dFr2172 LHD gene for large HD antigen, genomic 1223_..................124094
AM902179.1 Hepatitis delta virus dFr2042 LHD gene for large HD antigen, genomic 1222_..................123994
M84917.1HPDCIAA Hepatitis D virus RNA sequence 1220.......c...........123894
M58629.1HPDHDAGA Hepatitis delta virus large and small antigens (HDAg) gene, c1219.......c...........123794
AF104264.1 Hepatitis D virus strain TW2476, complete genome 1223.......c...........124194
AB118821.1 Hepatitis delta virus DNA, complete genome, strain:Miyako(JA-M5) 1228.......c...........124694
AB118821.1 Hepatitis delta virus DNA, complete genome, strain:Miyako(JA-M5) 1516.........t.._______152757
AB118834.1 Hepatitis delta virus DNA, complete genome, strain:Miyako(JA-M19) 1229.......c...........124794
AB118834.1 Hepatitis delta virus DNA, complete genome, strain:Miyako(JA-M19) 1517.........t.._______152857
AB118835.1 Hepatitis delta virus DNA, complete genome, strain:Miyako(JA-M20) 1229.......c...........124794
AB118835.1 Hepatitis delta virus DNA, complete genome, strain:Miyako(JA-M20) 1517.........t.._______152857
AB118842.1 Hepatitis delta virus DNA, complete genome, strain:Miyako(JA-M32) 1225.......c...........124394
AB118843.1 Hepatitis delta virus DNA, complete genome, strain:Miyako(JA-M33) 1223.......c...........124194
AB118844.1 Hepatitis delta virus DNA, complete genome, strain:Miyako(JA-M34) 1223.......c...........124194
AB118845.1 Hepatitis delta virus DNA, complete genome, strain:Miyako(JA-M36) 1222.......c...........124094
AB118845.1 Hepatitis delta virus DNA, complete genome, strain:Miyako(JA-M36) 1510.........t.._______152157
AY648952.1 Hepatitis delta virus isolate TWD62#16, complete genome 1224.......c...........124294
AY648953.1 Hepatitis delta virus isolate 2621#56, complete genome 1224.......c...........124294
AY648954.1 Hepatitis delta virus isolate TW1025#14, complete genome 1224.......c...........124294
AY648955.1 Hepatitis delta virus isolate TW3038#25, complete genome 1224.......c...........124294
AM183327.1 Hepatitis delta virus complete virion genome, strain dFr2736 1221...............a...123994
AM183329.1 Hepatitis delta virus complete virion genome, strain dFr2627 1223................c..124194
AM183330.1 Hepatitis delta virus complete virion genome, strain dFr2072 1221................c..123994
AM183332.1 Hepatitis delta virus complete virion genome, strain dFr2139 1218.......c...........123694
EF514903.1 Hepatitis delta virus isolate CB, complete genome 1217................c..123594
EF514904.1 Hepatitis delta virus isolate NK, complete genome 1217................c..123594
EF514906.1 Hepatitis delta virus isolate SO, complete genome 1217................c..123594
EF514907.1 Hepatitis delta virus isolate ZA, complete genome 1217................c..123594
AM779576.1 Hepatitis delta virus dFr2544 LHD gene for large HD antigen, genomic 1216.......c...........123494
AM779590.1 Hepatitis delta virus dTk38 LHD gene for large HD antigen, genomic RN1221................c..123994
AM779593.1 Hepatitis delta virus dTk13 LHD gene for large HD antigen, genomic RN1216................c..123494
AM779596.1 Hepatitis delta virus dTk21 LHD gene for large HD antigen, genomic RN1223...t...............124194
AM902174.1 Hepatitis delta virus dFr2404 LHD gene for large HD antigen, genomic 1210.......c...........122894
AM902175.1 Hepatitis delta virus dFr2406 LHD gene for large HD antigen, genomic 1223................c..124194
AM902178.1 Hepatitis delta virus dFr2040 LHD gene for large HD antigen, genomic 1222................c..124094
HQ005365.1 Hepatitis delta virus isolate 7, complete genome 996................c..101494
HQ005365.1 Hepatitis delta virus isolate 7, complete genome 1400________.a.........139052
AB118820.1 Hepatitis D virus DNA, complete genome, strain:Miyako(JA-M4) 1225_......c...........124289
AB118820.1 Hepatitis D virus DNA, complete genome, strain:Miyako(JA-M4) 1512.........t.._______152357
AM779580.1 Hepatitis delta virus dFr2046 LHD gene for large HD antigen, genomic 1225_..g...............124289
AM779581.1 Hepatitis delta virus dTk1 LHD gene for large HD antigen, genomic RNA1219.......c.........k.123789
AM779584.1 Hepatitis delta virus dTk4 LHD gene for large HD antigen, genomic RNA1222.......c........y..124089
AM902163.1 Hepatitis delta virus dFr2067 LHD gene for large HD antigen, genomic 1224_...............c..124189
AM902167.1 Hepatitis delta virus dFr2201 LHD gene for large HD antigen, genomic 1218_...............c..123589
AM902171.1 Hepatitis delta virus dFr2258 LHD gene for large HD antigen, genomic 1224_...............c..124189
AM902172.1 Hepatitis delta virus dFr2264 LHD gene for large HD antigen, genomic 1225_...............c..124289
AM902177.1 Hepatitis delta virus dFr2012 LHD gene for large HD antigen, genomic 1224_...............c..124189
AJ584844.1 Hepatitis D virus mRNA for small HD antigen (sHD gene), strain dFr-451217................___123284
AM183326.1 Hepatitis delta virus complete virion genome, strain dFr2600 1230................___124584
AM183333.1 Hepatitis delta virus complete virion genome, strain dFr2158 1216................___123184
L22066.1HPDAGA Hepatitis delta virus antigen gene, complete cds, and autocleav1223...t............c..124189
U81989.1HDU81989 Hepatitis delta virus from Ethiopia genotype IC, complete gen1221.......c.........g.123989
AF104263.1 Hepatitis D virus strain TW2667, complete genome 1218...t.............g.123689
AF104263.1 Hepatitis D virus strain TW2667, complete genome 274.........__________26647
AF425644.1 Hepatitis D virus isolate TWD2577-66 genotype I, complete genome 1216...t.............g.123489
AF425644.1 Hepatitis D virus isolate TWD2577-66 genotype I, complete genome 272.........__________26447
AB118847.1 Hepatitis delta virus DNA, complete genome, strain:Tokyo(JA-T) 1224.......c.........c.124289
AB118848.1 Hepatitis delta virus DNA, complete genome, strain:Nagasaki(JA-N1) 1220...t...c...........123889
AB118848.1 Hepatitis delta virus DNA, complete genome, strain:Nagasaki(JA-N1) 273.........__________26547
AJ584847.1 Hepatitis D virus mRNA for Large HD antigen (LHD gene), strain dFr-481229...t...c...........124789
AY648956.1 Hepatitis delta virus isolate TW1435#47, complete genome 1217...t............c..123589
AY648956.1 Hepatitis delta virus isolate TW1435#47, complete genome 273.........__________26547
AY648958.1 Hepatitis delta virus isolate TW1573#4, complete genome 1216...t.............g.123489
AY648958.1 Hepatitis delta virus isolate TW1573#4, complete genome 272.........__________26447
AY648959.1 Hepatitis delta virus isolate TW3678#25, complete genome 1216...t.............g.123489
AY648959.1 Hepatitis delta virus isolate TW3678#25, complete genome 272.........__________26447
EF514905.2 Hepatitis delta virus isolate OA, complete genome 1217...........c....c..123589
AM779585.1 Hepatitis delta virus dTk6 LHD gene for large HD antigen, genomic RNA1223...t............c..124189
AM779589.1 Hepatitis delta virus dTk3 LHD gene for large HD antigen, genomic RNA1221...............ac..123989
AM779591.1 Hepatitis delta virus dTk5 LHD gene for large HD antigen, genomic RNA1217...t...c...........123589
AM902166.1 Hepatitis delta virus dFr2189 LHD gene for large HD antigen, genomic 1218............c...c..123689
AM902173.1 Hepatitis delta virus dFr2380 LHD gene for large HD antigen, genomic 1210...t...c...........122889
AM902181.1 Hepatitis delta virus dFr2210 LHD gene for large HD antigen, genomic 1222...........c....c..124089
AJ584846.1 Hepatitis D virus mRNA for Large HD antigen (LHD gene), strain dFr-731234...............____124878
AM183331.1 Hepatitis delta virus complete virion genome, strain dFr2005 1226_...............___124078
AB037948.1 Hepatitis D virus genomic RNA, complete genome, isolate:VnzD8349 1218......tyg..........123684
AB037948.1 Hepatitis D virus genomic RNA, complete genome, isolate:VnzD8349 255...........g.______24363
AB037948.1 Hepatitis D virus genomic RNA, complete genome, isolate:VnzD8349 44.........t.gc.ct...2673
AY633627.1 Hepatitis delta virus isolate IR-1, complete genome 1218_...........c...c..123584
AM779586.1 Hepatitis delta virus dTk28 LHD gene for large HD antigen, genomic RN1221_..t............c..123884
AM902176.1 Hepatitis delta virus dFr2411 LHD gene for large HD antigen, genomic 1223_..t.............c.124084
AM902180.1 Hepatitis delta virus dFr2043 LHD gene for large HD antigen, genomic 1222_..t............c..123984
AB118849.1 Hepatitis delta virus DNA, complete genome, strain:Nagasaki(JA-N2) 1217...t............___123278
AB118849.1 Hepatitis delta virus DNA, complete genome, strain:Nagasaki(JA-N2) 273.........__________26547
AY648957.1 Hepatitis delta virus isolate TW5132#24, complete genome 1217...t............___123278
AY648957.1 Hepatitis delta virus isolate TW5132#24, complete genome 273.........__________26547
X77627.1 Hepatitis D virus genomic RNA for HDAg 1216...t...c.........g.123484
X77627.1 Hepatitis D virus genomic RNA for HDAg 273.........__________26547
AB037947.1 Hepatitis D virus genomic RNA, complete genome, isolate:VnzD8375 1217......tcg..........123584
AB037947.1 Hepatitis D virus genomic RNA, complete genome, isolate:VnzD8375 255...........g.______24363
AB037947.1 Hepatitis D virus genomic RNA, complete genome, isolate:VnzD8375 1640.........cag...____162663
AB037949.1 Hepatitis D virus genomic RNA, complete genome, isolate:VnzD8624 1219......tcg..........123784
AB037949.1 Hepatitis D virus genomic RNA, complete genome, isolate:VnzD8624 255...........g.______24363
AB037949.1 Hepatitis D virus genomic RNA, complete genome, isolate:VnzD8624 1642.........cag...____162863
AJ584845.1 Hepatitis D virus mRNA for Large HD antigen (LHD gene), strain dFr-471236_...........r..____124968
AM183328.1 Hepatitis delta virus complete virion genome, strain dFr2703 1228_..t...........tg..124578
AB088679.1 Hepatitis delta virus gene for HD antigen, complete cds 1516.........t.._______152757
AB118818.1 Hepatitis delta virus genomic RNA, complete genome, strain:Miyako(JA-1510.........t.._______152157
AB118819.1 Hepatitis delta virus DNA, complete genome, strain:Miyako(JA-M3) 1515.........t.._______152657
AB118823.1 Hepatitis delta virus DNA, complete genome, strain:Miyako(JA-M7) 1512.........t.._______152357
AB118824.1 Hepatitis delta virus DNA, complete genome, strain:Miyako(JA-M8) 1514.........t.._______152557
AB118825.1 Hepatitis delta virus DNA, complete genome, strain:Miyako(JA-M10) 1516.........t.._______152757
AB118826.1 Hepatitis delta virus DNA, complete genome, strain:Miyako(JA-M11) 1511.........t.._______152257
AB118827.1 Hepatitis delta virus DNA, complete genome, strain:Miyako(JA-M12) 1510.........t.._______152157
AB118828.1 Hepatitis D virus DNA, complete genome, strain:Miyako(JA-M13) 1510.........t.._______152157
AB118829.1 Hepatitis delta virus DNA, complete genome, strain:Miyako(JA-M14) 1513.........t.._______152457
AB118830.1 Hepatitis delta virus DNA, complete genome, strain:Miyako(JA-M15) 1513.........t.._______152457
AB118831.1 Hepatitis delta virus DNA, complete genome, strain:Miyako(JA-M16) 1512.........t.._______152357
AB118832.1 Hepatitis delta virus DNA, complete genome, strain:Miyako(JA-M17) 1513.........t.._______152457
AB118833.1 Hepatitis delta virus DNA, complete genome, strain:Miyako(JA-M18) 1512.........t.._______152357
AB118836.1 Hepatitis delta virus DNA, complete genome, strain:Miyako(JA-M44) 1512.........t.._______152357
AB118838.1 Hepatitis delta virus DNA, complete genome, strain:Miyako(JA-M24) 1514.........t.._______152557
AB118839.1 Hepatitis delta virus DNA, complete genome, strain:Miyako(JA-M27) 1514.........t.._______152557
AB118840.1 Hepatitis delta virus DNA, complete genome, strain:Miyako(JA-M29) 1508.........t.._______151957
AB118822.1 Hepatitis delta virus DNA, complete genome, strain:Miyako(JA-M6) 1513.........t.________152352
AM779583.1 Hepatitis delta virus dTk10 LHD gene for large HD antigen, genomic RN1628________.a.........161852
M92448.1HPDHDAG Hepatitis D virus, 5' end 273.........__________26547
AF425645.1 Hepatitis D virus isolate TWD2476-38 genotype IIa, complete genome 337.........__________34547