../../tmp/servers/virsirnadb/1375577548
Result for your query siRNA sequence
RED =100 % Complementary sequence
.=Identical residue
blue alphabets=mismatch
_=Gap


Acc numberStrain nameStartAlignmentEnd% Identity
Queryvirsi23021ttgcagagatctgaattcc19
AY746354.1 Junin virus strain Candid-1 segment L, complete sequence 301...................283100
AY746354.1 Junin virus strain Candid-1 segment L, complete sequence 6889_______..........__689852
AY746354.1 Junin virus strain Candid-1 segment L, complete sequence 5802___.........tg..___581457
AY746354.1 Junin virus strain Candid-1 segment L, complete sequence 3597_________........._360547
FJ805377.1 Junin virus strain XJ13 segment L, complete sequence 301...................283100
FJ805377.1 Junin virus strain XJ13 segment L, complete sequence 6889_______..........__689852
FJ805377.1 Junin virus strain XJ13 segment L, complete sequence 5802___.........tg..___581457
FJ805377.1 Junin virus strain XJ13 segment L, complete sequence 3597_________........._360547
FJ805379.1 Junin virus strain rXJ13 segment L, complete sequence 301...................283100
FJ805379.1 Junin virus strain rXJ13 segment L, complete sequence 6889_______..........__689852
FJ805379.1 Junin virus strain rXJ13 segment L, complete sequence 5802___.........tg..___581457
FJ805379.1 Junin virus strain rXJ13 segment L, complete sequence 3597_________........._360547
AY819707.2 Junin virus strain Candid #1 segment L, complete sequence 301...................283100
AY819707.2 Junin virus strain Candid #1 segment L, complete sequence 6889_______..........__689852
AY819707.2 Junin virus strain Candid #1 segment L, complete sequence 5802___.........tg..___581457
AY819707.2 Junin virus strain Candid #1 segment L, complete sequence 3597_________........._360547
DQ489718.2 Junin virus strain XJ#44 segment L, complete sequence 301...................283100
DQ489718.2 Junin virus strain XJ#44 segment L, complete sequence 6889_______..........__689852
DQ489718.2 Junin virus strain XJ#44 segment L, complete sequence 5802___.........tg..___581457
DQ489718.2 Junin virus strain XJ#44 segment L, complete sequence 3597_________........._360547
NC_005080.1 Junin virus segment L, complete genome 301...................283100
NC_005080.1 Junin virus segment L, complete genome 6889_______..........__689852
NC_005080.1 Junin virus segment L, complete genome 5802___.........tg..___581457
NC_005080.1 Junin virus segment L, complete genome 3597_________........._360547
AY619640.1 Junin virus strain Rumero segment L, complete sequence 6888_______..........__689752
AY619640.1 Junin virus strain Rumero segment L, complete sequence 5801___.........tg..___581357
AY619640.1 Junin virus strain Rumero segment L, complete sequence 510________.........g.52052
AY619640.1 Junin virus strain Rumero segment L, complete sequence 3596_________........._360447
AY216507.2 Junin virus strain MC2 segment L, complete sequence 226_______..........__21752
AY216507.2 Junin virus strain MC2 segment L, complete sequence 1313___.........tg..___130157
AY216507.2 Junin virus strain MC2 segment L, complete sequence 6604________.........g.659452
AY216507.2 Junin virus strain MC2 segment L, complete sequence 3518_________........._351047
D10072.2JUNSRNA Junin virus GPC, N genes for glycoproteins, nucleocapsid prote982_________........._99047
AY619641.1 Junin virus strain Rumero segment S, complete sequence 979_________........._98747
AY746353.1 Junin virus strain Candid-1 segment S, complete sequence 983_________........._99147
DQ272266.3 Junin virus strain Cba IV4454 segment S, complete sequence 981_________........._98947
FJ805378.1 Junin virus strain XJ13 segment S, complete sequence 980_________........._98847
FJ805380.1 Junin virus strain rXJ13 segment S, complete sequence 980_________........._98847
GQ121040.1 Junin virus strain XJ#44 segment S, complete sequence 980_________........._98847
FJ969442.1 Junin virus strain Candid #1 segment S, complete sequence 980_________........._98847
NC_005081.1 Junin virus segment S, complete genome 981_________........._98947