../../tmp/servers/virsirnadb/14957415
Result for your query siRNA sequence
RED =100 % Complementary sequence
.=Identical residue
blue alphabets=mismatch
_=Gap


Acc numberStrain nameStartAlignmentEnd% Identity
Queryvirsi21841tttccctgacggctgccga19
EF570133.1 Hepatitis E virus isolate SH-SW-zs1, complete genome 6607...................6625100
AB369690.1 Hepatitis E virus genomic RNA, complete genome, genotype 4, strain: E6591....at..........t..660984
AJ272108.1 Hepatitis E virus (genotype 4) complete genome sequence 2416..a..........._____242968
EU375463.1 Hepatitis E virus isolate Thai-swHEV07, complete genome 1667____..........a..._168068
EU375463.1 Hepatitis E virus isolate Thai-swHEV07, complete genome 6311_...t.g.cg.........632873
D11092.1HPECG Hepatitis E virus genomic RNA, complete genome 821...ta..c.........__83773
L25595.1HPEORFS Hepatitis E virus ORFs 1-3 820...ta..c.........__83673
L25547.1HPEGENA Hepatitis E virus unknown genes 820...ta..c.........__83673
D11093.1HPEUIGH Hepatitis E virus complete genome sequence 821...ta..c.........__83773
AF444002.1 Hepatitis E virus clone pSK-HEV-2, complete genome 819...ta..c.........__83573
AF444003.1 Hepatitis E virus clone pSK-HEV-3, complete genome 819...ta..c.........__83573
EU676172.2 Swine hepatitis E virus isolate swGX40, complete genome 819..ct...c.........__83573
EU676172.2 Swine hepatitis E virus isolate swGX40, complete genome 5510______.........t.._552157
AB291964.1 Hepatitis E virus genomic RNA, complete genome, isolate: JYK-Tok03C 5508___.g..........t.._552268
AB369687.1 Hepatitis E virus genomic RNA, complete genome, genotype 3, strain: E1647_____.........a..._165963
AB443623.1 Hepatitis E virus genomic RNA, nearly complete genome, isolate: JIO-s2379..a..........______239163
AB443624.1 Hepatitis E virus genomic RNA, nearly complete genome, isolate: JIO-s2379..a..........______239163
AB443625.1 Hepatitis E virus genomic RNA, nearly complete genome, isolate: JIO-s2379..a..........______239163
AB443626.1 Hepatitis E virus genomic RNA, nearly complete genome, isolate: JIO-s2379..a..........______239163
AB443627.1 Hepatitis E virus genomic RNA, nearly complete genome, isolate: JIO-s2379..a..........______239163
AB291952.1 Hepatitis E virus genomic RNA, nearly complete genome, isolate: JIY-T2384..a..........______239663
AB291953.1 Hepatitis E virus genomic RNA, nearly complete genome, isolate: JSO-O2384..a..........______239663
AB291954.1 Hepatitis E virus genomic RNA, nearly complete genome, isolate: JSS-O2384..a..........______239663
AB291955.1 Hepatitis E virus genomic RNA, nearly complete genome, isolate: JSW-K2384..a..........______239663
AB291956.1 Hepatitis E virus genomic RNA, nearly complete genome, isolate: JYM-T2384..a..........______239663
AB291957.1 Hepatitis E virus genomic RNA, nearly complete genome, isolate: JYU-O2384..a..........______239663
AB291960.1 Hepatitis E virus genomic RNA, complete genome, isolate: JTK-Kag06C 2405..a..........______241763
FJ763142.1 Hepatitis E virus isolate KNIH-hHEV4, complete genome 2414_.a..........._____242663
AY115488.1 Swine hepatitis E virus strain Arkell, complete genome 6323_...t.g.cg.........634073
EU723516.1 Swine hepatitis E virus isolate SWP8, complete genome 6372_...t.g.cg.........638973
AB291961.1 Hepatitis E virus genomic RNA, complete genome, isolate: JMH-Osa04C 6311_...t.g.cg.........632873
EU723512.2 Swine hepatitis E virus isolate SW626, complete genome 6310_...t.g.cg.........632773
EU723512.2 Swine hepatitis E virus isolate SW626, complete genome 4854__.........t.gt..._486968
AB602441.1 Hepatitis E virus genomic RNA, complete genome, isolate: wbJOY_06 6329_...t.g.tg.........634673
AB369688.1 Hepatitis E virus genomic RNA, complete genome, genotype 4, strain: E5407___..gg..t.........539268
EU723513.1 Swine hepatitis E virus isolate SW627, complete genome 4829__.........t.gt..._484468
X98292.1 Hepatitis E virus, complete genome 825_____..c.........__83657
AB091395.1 Hepatitis E virus genomic RNA, nearly complete genome, isolate: JSN-S5410_______.c..........539957
AY230202.1 Hepatitis E virus from Morocco, complete genome 2900_______.c..........291157
AB097811.1 Swine hepatitis E virus genomic RNA, complete genome, isolate: swJ13-5426_______.c..........541557
AB097812.1 Hepatitis E virus genomic RNA, complete genome, isolate: HE-JA1 5426_______.c..........541557
AB099347.1 Hepatitis E virus genomic RNA, complete genome, isolate: HE-JK4 5426_______.c..........541557
AB189070.1 Hepatitis E virus genomic RNA, complete genome, isolate: JBOAR1-Hyo042405..a........._______241657
AB189070.1 Hepatitis E virus genomic RNA, complete genome, isolate: JBOAR1-Hyo045411_______.g..........540057
AB189071.1 Hepatitis E virus genomic RNA, nearly complete genome, isolate: JDEER2388..a........._______239957
AB189071.1 Hepatitis E virus genomic RNA, nearly complete genome, isolate: JDEER5394_______.g..........538357
AB189072.1 Hepatitis E virus genes for nonstructural protein, capsid protein, hy2379..a........._______239057
AB189072.1 Hepatitis E virus genes for nonstructural protein, capsid protein, hy5385_______.g..........537457
AB189073.1 Hepatitis E virus genes for nonstructural protein, capsid protein, hy2379..a........._______239057
AB189073.1 Hepatitis E virus genes for nonstructural protein, capsid protein, hy5385_______.g..........537457
AB189074.1 Hepatitis E virus genes for nonstructural protein, capsid protein, hy2379..a........._______239057
AB189074.1 Hepatitis E virus genes for nonstructural protein, capsid protein, hy5385_______.g..........537457
AB189075.1 Hepatitis E virus genes for nonstructural protein, capsid protein, hy2379..a........._______239057
AB189075.1 Hepatitis E virus genes for nonstructural protein, capsid protein, hy5385_______.g..........537457
AB200239.1 Hepatitis E virus genomic RNA, complete genome, isolate: JSN-Sap-FH025427_______.c..........541657
AB193176.1 Hepatitis E virus genomic RNA, complete genome, isolate: JSF-Tot03C 5427_______.c..........541657
AB193177.1 Hepatitis E virus genomic RNA, complete genome, isolate: JYN-Sap01C 5427_______.c..........541657
AB193178.1 Hepatitis E virus genomic RNA, complete genome, isolate: JYN-Nii02L 5401_______.c..........539057
AB197673.1 Hepatitis E virus genomic RNA, complete genome, isolate: JKO-ChiSai985511___.g..........____552257
AB222184.1 Hepatitis E virus genomic RNA, complete genome, isolate: wbJYG1 2405_.a..........______241657
AB220971.1 Hepatitis E virus genomic RNA, complete genome, genotype 4, isolate: 5426_______.c..........541557
AB253420.1 Hepatitis E virus genomic RNA, nearly complete genome, isolate:HEVN2 5488___.g..........____549957
EF077630.1 Hepatitis E virus isolate Ch-S-1, complete genome 5510___.g..........____552157
EF206691.1 Avian hepatitis E virus from USA, complete genome 1440.........t.._______145157
EU366959.1 Hepatitis E virus isolate swGX32, complete genome 5514___.g..........____552557
AM943646.3 Avian hepatitis E virus genes for polyprotein, capsid protein and cyt1416.........t.._______142757
AB291951.1 Hepatitis E virus genomic RNA, nearly complete genome, isolate: JIO-S2385_.a..........______239657
AB291962.1 Hepatitis E virus genomic RNA, complete genome, isolate: JHK-Toy04C 2405_.a..........______241657
AB291963.1 Hepatitis E virus genomic RNA, complete genome, isolate: JRM-Toy05C 2405_.a..........______241657
FJ610232.1 Swine hepatitis E virus isolate swCH189, complete genome 5514___.g..........____552557
AB481227.1 Swine hepatitis E virus genomic RNA, complete genome, isolate: swJB-H5426_______.c..........541557
FJ527832.2 Hepatitis E virus isolate SAAS-JDY5, complete genome 2406_.a..........______241757
GU188851.1 Swine hepatitis E virus isolate WH09, complete genome 5426_______.g..........541557
GU361892.1 Swine hepatitis E virus strain hb-3, complete genome 2704_______..........t.271557
GU119960.2 Swine hepatitis E virus isolate CHN-XJ-SW33, complete genome 5510___.g..........____552157
GU119961.3 Swine hepatitis E virus isolate CHN-XJ-SW13, complete genome 5427_______.c..........541657
HQ709170.1 Hepatitis E virus strain Kernow-C1, complete genome 5597_______.g..........558657
HQ389543.1 Hepatitis E virus strain Kernow-C1, complete genome 5426_______.g..........541557
HQ389544.1 Hepatitis E virus strain Kernow-C1, complete genome 5597_______.g..........558657
HQ634346.1 Hepatitis E virus strain TW6196E, complete genome 5511___.g..........____552257
AB080575.1 Hepatitis E virus genomic RNA, complete genome, isolate: HE-JI4 5355_________..........534652
AB108537.1 Hepatitis E virus genomic RNA, nearly complete genome, isolate:CCC2202401____.........._____241052