VIRsiRNAdb

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Total number of Results for 15220426 are 6
Results from 0 - 25

siRNA sequence "gucuaaacgaacaugaaac" alignment with "SARS Coronavirus" virus reference Genome sequences
siRNA sequence matching with "gucuaaacgaacaugaaac" SARS Coronavirus" Virus reference Genome sequences
Browse all the records for "SARS Coronavirus" virus
Browse "virsi1338 " record
Length: 19
GC Content:37 %
Starting position: 27767
Strain of Virus: HKU-39849
GenBank Acc: AY278491
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):24

Offtargets for "gucuaaacgaacaugaaac" siRNA in Human Genome sequences
See AY278491 at Genbank
Pubmed:15220426
Article:Inhibition of severe acute respiratory syndrome virus replication by small interfering RNAs in mammalian cells.
Authors:Wang Z, Ren L, Zhao X, Hung T, Meng A, Wang J, Chen YG.
Journal:J Virol. 2004 Jul;78(14):7523-7.
Entrez:15220426

siRNA sequence "caauucgaagggagguagg" alignment with "SARS Coronavirus" virus reference Genome sequences
siRNA sequence matching with "caauucgaagggagguagg" SARS Coronavirus" Virus reference Genome sequences
Browse all the records for "SARS Coronavirus" virus
Browse "virsi1341 " record
Length: 19
GC Content:53 %
Starting position: 12714
Strain of Virus: HKU-39849
GenBank Acc: AY278491
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):24

Offtargets for "caauucgaagggagguagg" siRNA in Human Genome sequences
See AY278491 at Genbank
Pubmed:15220426
Article:Inhibition of severe acute respiratory syndrome virus replication by small interfering RNAs in mammalian cells.
Authors:Wang Z, Ren L, Zhao X, Hung T, Meng A, Wang J, Chen YG.
Journal:J Virol. 2004 Jul;78(14):7523-7.
Entrez:15220426

siRNA sequence "guucucuaaacgaacuuua" alignment with "SARS Coronavirus" virus reference Genome sequences
siRNA sequence matching with "guucucuaaacgaacuuua" SARS Coronavirus" Virus reference Genome sequences
Browse all the records for "SARS Coronavirus" virus
Browse "virsi1345 " record
Length: 19
GC Content:32 %
Starting position: 58
Strain of Virus: HKU-39849
GenBank Acc: AY278491
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):24

Offtargets for "guucucuaaacgaacuuua" siRNA in Human Genome sequences
See AY278491 at Genbank
Pubmed:15220426
Article:Inhibition of severe acute respiratory syndrome virus replication by small interfering RNAs in mammalian cells.
Authors:Wang Z, Ren L, Zhao X, Hung T, Meng A, Wang J, Chen YG.
Journal:J Virol. 2004 Jul;78(14):7523-7.
Entrez:15220426

siRNA sequence "gaauauuaggcgcaggcug" alignment with "SARS Coronavirus" virus reference Genome sequences
siRNA sequence matching with "gaauauuaggcgcaggcug" SARS Coronavirus" Virus reference Genome sequences
Browse all the records for "SARS Coronavirus" virus
Browse "virsi1343 " record
Length: 19
GC Content:53 %
Starting position: 15877
Strain of Virus: HKU-39849
GenBank Acc: AY278491
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):18

Offtargets for "gaauauuaggcgcaggcug" siRNA in Human Genome sequences
See AY278491 at Genbank
Pubmed:15220426
Article:Inhibition of severe acute respiratory syndrome virus replication by small interfering RNAs in mammalian cells.
Authors:Wang Z, Ren L, Zhao X, Hung T, Meng A, Wang J, Chen YG.
Journal:J Virol. 2004 Jul;78(14):7523-7.
Entrez:15220426

siRNA sequence "cuuacauagcucgcgucuc" alignment with "SARS Coronavirus" virus reference Genome sequences
siRNA sequence matching with "cuuacauagcucgcgucuc" SARS Coronavirus" Virus reference Genome sequences
Browse all the records for "SARS Coronavirus" virus
Browse "virsi1342 " record
Length: 19
GC Content:53 %
Starting position: 14450
Strain of Virus: HKU-39849
GenBank Acc: AY278491
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):24

Offtargets for "cuuacauagcucgcgucuc" siRNA in Human Genome sequences
See AY278491 at Genbank
Pubmed:15220426
Article:Inhibition of severe acute respiratory syndrome virus replication by small interfering RNAs in mammalian cells.
Authors:Wang Z, Ren L, Zhao X, Hung T, Meng A, Wang J, Chen YG.
Journal:J Virol. 2004 Jul;78(14):7523-7.
Entrez:15220426

siRNA sequence "auugcguagcgagacacug" alignment with "SARS Coronavirus" virus reference Genome sequences
siRNA sequence matching with "auugcguagcgagacacug" SARS Coronavirus" Virus reference Genome sequences
Browse all the records for "SARS Coronavirus" virus
Browse "virsi1340 " record
Length: 19
GC Content:53 %
Starting position: 9771
Strain of Virus: HKU-39849
GenBank Acc: AY278491
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):24

Offtargets for "auugcguagcgagacacug" siRNA in Human Genome sequences
See AY278491 at Genbank
Pubmed:15220426
Article:Inhibition of severe acute respiratory syndrome virus replication by small interfering RNAs in mammalian cells.
Authors:Wang Z, Ren L, Zhao X, Hung T, Meng A, Wang J, Chen YG.
Journal:J Virol. 2004 Jul;78(14):7523-7.
Entrez:15220426


VIRsiRNAid	siRNA Sequence	Virus_Name	Target Region	Cell Line	Test Object	Efficacy	PMID	Offtarget	Align With	ALIGN0 Result
virsi1338	gucuaaacgaacaugaaac	SARS Coronavirus	ORF1	Vero E6	Protein	Low	15220426	Blast SL	refseqs
virsi1341	caauucgaagggagguagg	SARS Coronavirus	ORF1	Vero E6	Protein	Low	15220426	Blast SL	refseqs
virsi1345	guucucuaaacgaacuuua	SARS Coronavirus	ORF1	Vero E6	Protein	Low	15220426	Blast SL	refseqs
virsi1343	gaauauuaggcgcaggcug	SARS Coronavirus	ORF1	Vero E6	mRNA	80	15220426	Blast SL	refseqs
virsi1342	cuuacauagcucgcgucuc	SARS Coronavirus	ORF1	Vero E6	mRNA	60	15220426	Blast SL	refseqs
virsi1340	auugcguagcgagacacug	SARS Coronavirus	ORF1	Vero E6	Protein	0	15220426	Blast SL	refseqs



: siRNA specific for both strands
: siRNA specific for only one strands
: siRNA Not specific
SL: siRNA seedlocator algorithm