VIRsiRNAdb

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Total number of Results for 15652970 are 7
Results from 0 - 25

siRNA sequence "gggcuaucaaccuauagau" alignment with "SARS Coronavirus" virus reference Genome sequences
siRNA sequence matching with "gggcuaucaaccuauagau" SARS Coronavirus" Virus reference Genome sequences
Browse all the records for "SARS Coronavirus" virus
Browse "virsi1347 " record
Length: 19
GC Content:42 %
Starting position: 22085
Strain of Virus: Urbani
GenBank Acc: AY278741
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48

Offtargets for "gggcuaucaaccuauagau" siRNA in Human Genome sequences
See AY278741 at Genbank
Pubmed:15652970
Article:Inhibition of SARS-CoV replication by siRNA.
Authors:Wu CJ, Huang HW, Liu CY, Hong CF, Chan YL.
Journal:Antiviral Res. 2005 Jan;65(1):45-8.
Entrez:15652970

siRNA sequence "caaggcgauuagucaaauu" alignment with "SARS Coronavirus" virus reference Genome sequences
siRNA sequence matching with "caaggcgauuagucaaauu" SARS Coronavirus" Virus reference Genome sequences
Browse all the records for "SARS Coronavirus" virus
Browse "virsi1344 " record
Length: 19
GC Content:37 %
Starting position: 24221
Strain of Virus: Urbani
GenBank Acc: AY278741
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48

Offtargets for "caaggcgauuagucaaauu" siRNA in Human Genome sequences
See AY278741 at Genbank
Pubmed:15652970
Article:Inhibition of SARS-CoV replication by siRNA.
Authors:Wu CJ, Huang HW, Liu CY, Hong CF, Chan YL.
Journal:Antiviral Res. 2005 Jan;65(1):45-8.
Entrez:15652970

siRNA sequence "cguaacuaaacagcacaag" alignment with "SARS Coronavirus" virus reference Genome sequences
siRNA sequence matching with "cguaacuaaacagcacaag" SARS Coronavirus" Virus reference Genome sequences
Browse all the records for "SARS Coronavirus" virus
Browse "virsi1349 " record
Length: 19
GC Content:42 %
Starting position: 29484
Strain of Virus: Urbani
GenBank Acc: AY278741
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48

Offtargets for "cguaacuaaacagcacaag" siRNA in Human Genome sequences
See AY278741 at Genbank
Pubmed:15652970
Article:Inhibition of SARS-CoV replication by siRNA.
Authors:Wu CJ, Huang HW, Liu CY, Hong CF, Chan YL.
Journal:Antiviral Res. 2005 Jan;65(1):45-8.
Entrez:15652970

siRNA sequence "agccaaccaaccucgaucu" alignment with "SARS Coronavirus" virus reference Genome sequences
siRNA sequence matching with "agccaaccaaccucgaucu" SARS Coronavirus" Virus reference Genome sequences
Browse all the records for "SARS Coronavirus" virus
Browse "virsi1350 " record
Length: 19
GC Content:53 %
Starting position: 28
Strain of Virus: Urbani
GenBank Acc: AY278741
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48

Offtargets for "agccaaccaaccucgaucu" siRNA in Human Genome sequences
See AY278741 at Genbank
Pubmed:15652970
Article:Inhibition of SARS-CoV replication by siRNA.
Authors:Wu CJ, Huang HW, Liu CY, Hong CF, Chan YL.
Journal:Antiviral Res. 2005 Jan;65(1):45-8.
Entrez:15652970

siRNA sequence "aucuguucucuaaacgaac" alignment with "SARS Coronavirus" virus reference Genome sequences
siRNA sequence matching with "aucuguucucuaaacgaac" SARS Coronavirus" Virus reference Genome sequences
Browse all the records for "SARS Coronavirus" virus
Browse "virsi1351 " record
Length: 19
GC Content:37 %
Starting position: 54
Strain of Virus: Urbani
GenBank Acc: AY278741
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48

Offtargets for "aucuguucucuaaacgaac" siRNA in Human Genome sequences
See AY278741 at Genbank
Pubmed:15652970
Article:Inhibition of SARS-CoV replication by siRNA.
Authors:Wu CJ, Huang HW, Liu CY, Hong CF, Chan YL.
Journal:Antiviral Res. 2005 Jan;65(1):45-8.
Entrez:15652970

siRNA sequence "uguuguuauacgagcaugu" alignment with "SARS Coronavirus" virus reference Genome sequences
siRNA sequence matching with "uguuguuauacgagcaugu" SARS Coronavirus" Virus reference Genome sequences
Browse all the records for "SARS Coronavirus" virus
Browse "virsi1346 " record
Length: 19
GC Content:37 %
Starting position: 21857
Strain of Virus: Urbani
GenBank Acc: AY278741
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48

Offtargets for "uguuguuauacgagcaugu" siRNA in Human Genome sequences
See AY278741 at Genbank
Pubmed:15652970
Article:Inhibition of SARS-CoV replication by siRNA.
Authors:Wu CJ, Huang HW, Liu CY, Hong CF, Chan YL.
Journal:Antiviral Res. 2005 Jan;65(1):45-8.
Entrez:15652970

siRNA sequence "uuucgcaauuccguuuacg" alignment with "SARS Coronavirus" virus reference Genome sequences
siRNA sequence matching with "uuucgcaauuccguuuacg" SARS Coronavirus" Virus reference Genome sequences
Browse all the records for "SARS Coronavirus" virus
Browse "virsi1348 " record
Length: 19
GC Content:42 %
Starting position: 29432
Strain of Virus: Urbani
GenBank Acc: AY278741
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48

Offtargets for "uuucgcaauuccguuuacg" siRNA in Human Genome sequences
See AY278741 at Genbank
Pubmed:15652970
Article:Inhibition of SARS-CoV replication by siRNA.
Authors:Wu CJ, Huang HW, Liu CY, Hong CF, Chan YL.
Journal:Antiviral Res. 2005 Jan;65(1):45-8.
Entrez:15652970


VIRsiRNAid	siRNA Sequence	Virus_Name	Target Region	Cell Line	Test Object	Efficacy	PMID	Offtarget	Align With	ALIGN0 Result
virsi1347	gggcuaucaaccuauagau	SARS Coronavirus	Spike	Vero E6	RNA	90	15652970	Blast SL	refseqs
virsi1344	caaggcgauuagucaaauu	SARS Coronavirus	Spike	Vero E6	RNA	85	15652970	Blast SL	refseqs
virsi1349	cguaacuaaacagcacaag	SARS Coronavirus	3'UTR	Vero E6	RNA	56	15652970	Blast SL	refseqs
virsi1350	agccaaccaaccucgaucu	SARS Coronavirus	Leader	Vero E6	RNA	50	15652970	Blast SL	refseqs
virsi1351	aucuguucucuaaacgaac	SARS Coronavirus	TRS	Vero E6	RNA	20	15652970	Blast SL	refseqs
virsi1346	uguuguuauacgagcaugu	SARS Coronavirus	Spike	Vero E6	RNA	10	15652970	Blast SL	refseqs
virsi1348	uuucgcaauuccguuuacg	SARS Coronavirus	3'UTR	Vero E6	RNA	10	15652970	Blast SL	refseqs



: siRNA specific for both strands
: siRNA specific for only one strands
: siRNA Not specific
SL: siRNA seedlocator algorithm