VIRsiRNAdb

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Total number of Results for 18662724 are 30
Results from 25 - 50

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siRNA sequence "guagccugaaugacucagu" alignment with "Human Coxsackievirus [CV]" virus reference Genome sequences
siRNA sequence matching with "guagccugaaugacucagu" Human Coxsackievirus [CV]" Virus reference Genome sequences
Browse all the records for "Human Coxsackievirus [CV]" virus
Browse "virsi1254 " record
Length: 19
GC Content:47 %
Starting position: 536
Strain of Virus: Shzh05-1
GenBank Acc: EU262658
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48

Offtargets for "guagccugaaugacucagu" siRNA in Human Genome sequences
See EU262658 at Genbank
Pubmed:18662724
Article:Quick identification of effective small interfering RNAs that inhibit the replication of coxsackievirus A16.
Authors:Wu Z, Gao Y, Sun L, Tien P, Jin Q.
Journal:Antiviral Res. 2008 Dec;80(3):295-301. Epub 2008 Jul 26.
Entrez:18662724

siRNA sequence "gcuauuccaccuaugugaa" alignment with "Human Coxsackievirus [CV]" virus reference Genome sequences
siRNA sequence matching with "gcuauuccaccuaugugaa" Human Coxsackievirus [CV]" Virus reference Genome sequences
Browse all the records for "Human Coxsackievirus [CV]" virus
Browse "virsi1258 " record
Length: 19
GC Content:42 %
Starting position: 458
Strain of Virus: Shzh05-1
GenBank Acc: EU262658
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48

Offtargets for "gcuauuccaccuaugugaa" siRNA in Human Genome sequences
See EU262658 at Genbank
Pubmed:18662724
Article:Quick identification of effective small interfering RNAs that inhibit the replication of coxsackievirus A16.
Authors:Wu Z, Gao Y, Sun L, Tien P, Jin Q.
Journal:Antiviral Res. 2008 Dec;80(3):295-301. Epub 2008 Jul 26.
Entrez:18662724

siRNA sequence "gcacugcaacuuuggucua" alignment with "Human Coxsackievirus [CV]" virus reference Genome sequences
siRNA sequence matching with "gcacugcaacuuuggucua" Human Coxsackievirus [CV]" Virus reference Genome sequences
Browse all the records for "Human Coxsackievirus [CV]" virus
Browse "virsi1277 " record
Length: 19
GC Content:47 %
Starting position: 624
Strain of Virus: Shzh05-1
GenBank Acc: EU262658
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48

Offtargets for "gcacugcaacuuuggucua" siRNA in Human Genome sequences
See EU262658 at Genbank
Pubmed:18662724
Article:Quick identification of effective small interfering RNAs that inhibit the replication of coxsackievirus A16.
Authors:Wu Z, Gao Y, Sun L, Tien P, Jin Q.
Journal:Antiviral Res. 2008 Dec;80(3):295-301. Epub 2008 Jul 26.
Entrez:18662724

siRNA sequence "gcaaaucagcuaaagcaau" alignment with "Human Coxsackievirus [CV]" virus reference Genome sequences
siRNA sequence matching with "gcaaaucagcuaaagcaau" Human Coxsackievirus [CV]" Virus reference Genome sequences
Browse all the records for "Human Coxsackievirus [CV]" virus
Browse "virsi1257 " record
Length: 19
GC Content:37 %
Starting position: 244
Strain of Virus: Shzh05-1
GenBank Acc: EU262658
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48

Offtargets for "gcaaaucagcuaaagcaau" siRNA in Human Genome sequences
See EU262658 at Genbank
Pubmed:18662724
Article:Quick identification of effective small interfering RNAs that inhibit the replication of coxsackievirus A16.
Authors:Wu Z, Gao Y, Sun L, Tien P, Jin Q.
Journal:Antiviral Res. 2008 Dec;80(3):295-301. Epub 2008 Jul 26.
Entrez:18662724

siRNA sequence "gaaccacugcaacuuuggu" alignment with "Human Coxsackievirus [CV]" virus reference Genome sequences
siRNA sequence matching with "gaaccacugcaacuuuggu" Human Coxsackievirus [CV]" Virus reference Genome sequences
Browse all the records for "Human Coxsackievirus [CV]" virus
Browse "virsi1283 " record
Length: 19
GC Content:47 %
Starting position: 621
Strain of Virus: Shzh05-1
GenBank Acc: EU262658
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48

Offtargets for "gaaccacugcaacuuuggu" siRNA in Human Genome sequences
See EU262658 at Genbank
Pubmed:18662724
Article:Quick identification of effective small interfering RNAs that inhibit the replication of coxsackievirus A16.
Authors:Wu Z, Gao Y, Sun L, Tien P, Jin Q.
Journal:Antiviral Res. 2008 Dec;80(3):295-301. Epub 2008 Jul 26.
Entrez:18662724


VIRsiRNAid	siRNA Sequence	Virus_Name	Target Region	Cell Line	Test Object	Efficacy	PMID	Offtarget	Align With	ALIGN0 Result
virsi1254	guagccugaaugacucagu	Human Coxsackievirus [CV]	3D	293T	mRNA	45	18662724	Blast SL	refseqs
virsi1258	gcuauuccaccuaugugaa	Human Coxsackievirus [CV]	3D	293T	mRNA	44	18662724	Blast SL	refseqs
virsi1277	gcacugcaacuuuggucua	Human Coxsackievirus [CV]	1B	293T	mRNA	43	18662724	Blast SL	refseqs
virsi1257	gcaaaucagcuaaagcaau	Human Coxsackievirus [CV]	3D	293T	mRNA	41	18662724	Blast SL	refseqs
virsi1283	gaaccacugcaacuuuggu	Human Coxsackievirus [CV]	1B	293T	mRNA	36	18662724	Blast SL	refseqs



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: siRNA specific for both strands
: siRNA specific for only one strands
: siRNA Not specific
SL: siRNA seedlocator algorithm