VIRsiRNAdb

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Total number of Results for Epstein-Barr Virus [EBV] are 43
Results from 0 - 25

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siRNA sequence "guaagaccucccuuuacaaccuaag" alignment with "Epstein-Barr Virus [EBV]" virus reference Genome sequences
siRNA sequence matching with "guaagaccucccuuuacaaccuaag" Epstein-Barr Virus [EBV]" Virus reference Genome sequences
Browse all the records for "Epstein-Barr Virus [EBV]" virus
Browse "virsi1874 " record
Length: 25
GC Content:44 %
Starting position: 109487
Strain of Virus: B95-8
GenBank Acc: V01555
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):72

Offtargets for "guaagaccucccuuuacaaccuaag" siRNA in Human Genome sequences
See V01555 at Genbank
Pubmed:19471888
Article:Maintenance of the viral episome is essential for the cell survival of an Epstein-Barr virus positive gastric carcinoma cell line.
Authors:Oh ST, Kim M, Lee SK.
Journal:Arch Pharm Res. 2009 May;32(5):729-36. Epub 2009 May 27.
Entrez:19471888

siRNA sequence "gcaucguggucaaggagguuccaac" alignment with "Epstein-Barr Virus [EBV]" virus reference Genome sequences
siRNA sequence matching with "gcaucguggucaaggagguuccaac" Epstein-Barr Virus [EBV]" Virus reference Genome sequences
Browse all the records for "Epstein-Barr Virus [EBV]" virus
Browse "virsi1872 " record
Length: 25
GC Content:56 %
Starting position: 109350
Strain of Virus: B95-8
GenBank Acc: V01555
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):72

Offtargets for "gcaucguggucaaggagguuccaac" siRNA in Human Genome sequences
See V01555 at Genbank
Pubmed:19471888
Article:Maintenance of the viral episome is essential for the cell survival of an Epstein-Barr virus positive gastric carcinoma cell line.
Authors:Oh ST, Kim M, Lee SK.
Journal:Arch Pharm Res. 2009 May;32(5):729-36. Epub 2009 May 27.
Entrez:19471888

siRNA sequence "gugauaaccauggacgaggacggggaa" alignment with "Epstein-Barr Virus [EBV]" virus reference Genome sequences
siRNA sequence matching with "gugauaaccauggacgaggacggggaa" Epstein-Barr Virus [EBV]" Virus reference Genome sequences
Browse all the records for "Epstein-Barr Virus [EBV]" virus
Browse "virsi1864 " record
Length: 27
GC Content:56 %
Starting position: 108056
Strain of Virus: B95-8
GenBank Acc: V01555
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):72

Offtargets for "gugauaaccauggacgaggacggggaa" siRNA in Human Genome sequences
See V01555 at Genbank
Pubmed:19471888
Article:Maintenance of the viral episome is essential for the cell survival of an Epstein-Barr virus positive gastric carcinoma cell line.
Authors:Oh ST, Kim M, Lee SK.
Journal:Arch Pharm Res. 2009 May;32(5):729-36. Epub 2009 May 27.
Entrez:19471888

siRNA sequence "ccgggagcgauagagcagggccccg" alignment with "Epstein-Barr Virus [EBV]" virus reference Genome sequences
siRNA sequence matching with "ccgggagcgauagagcagggccccg" Epstein-Barr Virus [EBV]" Virus reference Genome sequences
Browse all the records for "Epstein-Barr Virus [EBV]" virus
Browse "virsi1870 " record
Length: 25
GC Content:76 %
Starting position: 109240
Strain of Virus: B95-8
GenBank Acc: V01555
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):72

Offtargets for "ccgggagcgauagagcagggccccg" siRNA in Human Genome sequences
See V01555 at Genbank
Pubmed:19471888
Article:Maintenance of the viral episome is essential for the cell survival of an Epstein-Barr virus positive gastric carcinoma cell line.
Authors:Oh ST, Kim M, Lee SK.
Journal:Arch Pharm Res. 2009 May;32(5):729-36. Epub 2009 May 27.
Entrez:19471888

siRNA sequence "gcccgcuccuaccugcaauaucaagg" alignment with "Epstein-Barr Virus [EBV]" virus reference Genome sequences
siRNA sequence matching with "gcccgcuccuaccugcaauaucaagg" Epstein-Barr Virus [EBV]" Virus reference Genome sequences
Browse all the records for "Epstein-Barr Virus [EBV]" virus
Browse "virsi1879 " record
Length: 26
GC Content:58 %
Starting position: 97337
Strain of Virus: gD1
GenBank Acc: AY961628
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):72

Offtargets for "gcccgcuccuaccugcaauaucaagg" siRNA in Human Genome sequences
See AY961628 at Genbank
Pubmed:19471888
Article:Maintenance of the viral episome is essential for the cell survival of an Epstein-Barr virus positive gastric carcinoma cell line.
Authors:Oh ST, Kim M, Lee SK.
Journal:Arch Pharm Res. 2009 May;32(5):729-36. Epub 2009 May 27.
Entrez:19471888

siRNA sequence "gauggaguagauuugccucccuggu" alignment with "Epstein-Barr Virus [EBV]" virus reference Genome sequences
siRNA sequence matching with "gauggaguagauuugccucccuggu" Epstein-Barr Virus [EBV]" Virus reference Genome sequences
Browse all the records for "Epstein-Barr Virus [EBV]" virus
Browse "virsi1881 " record
Length: 25
GC Content:52 %
Starting position: 97383
Strain of Virus: gD1
GenBank Acc: AY961628
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):72

Offtargets for "gauggaguagauuugccucccuggu" siRNA in Human Genome sequences
See AY961628 at Genbank
Pubmed:19471888
Article:Maintenance of the viral episome is essential for the cell survival of an Epstein-Barr virus positive gastric carcinoma cell line.
Authors:Oh ST, Kim M, Lee SK.
Journal:Arch Pharm Res. 2009 May;32(5):729-36. Epub 2009 May 27.
Entrez:19471888

siRNA sequence "ccuugcuguuccacaaugucguauu" alignment with "Epstein-Barr Virus [EBV]" virus reference Genome sequences
siRNA sequence matching with "ccuugcuguuccacaaugucguauu" Epstein-Barr Virus [EBV]" Virus reference Genome sequences
Browse all the records for "Epstein-Barr Virus [EBV]" virus
Browse "virsi1876 " record
Length: 25
GC Content:44 %
Starting position: 97154
Strain of Virus: gD1
GenBank Acc: AY961628
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):72

Offtargets for "ccuugcuguuccacaaugucguauu" siRNA in Human Genome sequences
See AY961628 at Genbank
Pubmed:19471888
Article:Maintenance of the viral episome is essential for the cell survival of an Epstein-Barr virus positive gastric carcinoma cell line.
Authors:Oh ST, Kim M, Lee SK.
Journal:Arch Pharm Res. 2009 May;32(5):729-36. Epub 2009 May 27.
Entrez:19471888

siRNA sequence "cuggaccagaaggcuccggcgg" alignment with "Epstein-Barr Virus [EBV]" virus reference Genome sequences
siRNA sequence matching with "cuggaccagaaggcuccggcgg" Epstein-Barr Virus [EBV]" Virus reference Genome sequences
Browse all the records for "Epstein-Barr Virus [EBV]" virus
Browse "virsi1862 " record
Length: 22
GC Content:73 %
Starting position: 108011
Strain of Virus: B95-8
GenBank Acc: V01555
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):72

Offtargets for "cuggaccagaaggcuccggcgg" siRNA in Human Genome sequences
See V01555 at Genbank
Pubmed:19471888
Article:Maintenance of the viral episome is essential for the cell survival of an Epstein-Barr virus positive gastric carcinoma cell line.
Authors:Oh ST, Kim M, Lee SK.
Journal:Arch Pharm Res. 2009 May;32(5):729-36. Epub 2009 May 27.
Entrez:19471888

siRNA sequence "aagacauagagaugguguccggagac" alignment with "Epstein-Barr Virus [EBV]" virus reference Genome sequences
siRNA sequence matching with "aagacauagagaugguguccggagac" Epstein-Barr Virus [EBV]" Virus reference Genome sequences
Browse all the records for "Epstein-Barr Virus [EBV]" virus
Browse "virsi1866 " record
Length: 26
GC Content:50 %
Starting position: 108141
Strain of Virus: B95-8
GenBank Acc: V01555
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):72

Offtargets for "aagacauagagaugguguccggagac" siRNA in Human Genome sequences
See V01555 at Genbank
Pubmed:19471888
Article:Maintenance of the viral episome is essential for the cell survival of an Epstein-Barr virus positive gastric carcinoma cell line.
Authors:Oh ST, Kim M, Lee SK.
Journal:Arch Pharm Res. 2009 May;32(5):729-36. Epub 2009 May 27.
Entrez:19471888

siRNA sequence "cugcaaagggacccacgguggaacagg" alignment with "Epstein-Barr Virus [EBV]" virus reference Genome sequences
siRNA sequence matching with "cugcaaagggacccacgguggaacagg" Epstein-Barr Virus [EBV]" Virus reference Genome sequences
Browse all the records for "Epstein-Barr Virus [EBV]" virus
Browse "virsi1868 " record
Length: 27
GC Content:63 %
Starting position: 108192
Strain of Virus: B95-8
GenBank Acc: V01555
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):72

Offtargets for "cugcaaagggacccacgguggaacagg" siRNA in Human Genome sequences
See V01555 at Genbank
Pubmed:19471888
Article:Maintenance of the viral episome is essential for the cell survival of an Epstein-Barr virus positive gastric carcinoma cell line.
Authors:Oh ST, Kim M, Lee SK.
Journal:Arch Pharm Res. 2009 May;32(5):729-36. Epub 2009 May 27.
Entrez:19471888

siRNA sequence "caacagcuagcagacauug" alignment with "Epstein-Barr Virus [EBV]" virus reference Genome sequences
siRNA sequence matching with "caacagcuagcagacauug" Epstein-Barr Virus [EBV]" Virus reference Genome sequences
Browse all the records for "Epstein-Barr Virus [EBV]" virus
Browse "virsi1859 " record
Length: 19
GC Content:47 %
Starting position: 415
GenBank Acc: EU340368
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48

Offtargets for "caacagcuagcagacauug" siRNA in Human Genome sequences
See EU340368 at Genbank
Pubmed:15166418
Article:Inhibition of the Epstein-Barr virus lytic cycle by Zta-targeted RNA interference.
Authors:Chang Y, Chang SS, Lee HH, Doong SL, Takada K, Tsai CH.
Journal:J Gen Virol. 2004 Jun;85(Pt 6):1371-9.
Entrez:15166418

siRNA sequence "ggcuagauuuccuacaacu" alignment with "Epstein-Barr Virus [EBV]" virus reference Genome sequences
siRNA sequence matching with "ggcuagauuuccuacaacu" Epstein-Barr Virus [EBV]" Virus reference Genome sequences
Browse all the records for "Epstein-Barr Virus [EBV]" virus
Browse "virsi1887 " record
Length: 19
GC Content:42 %
Starting position: 110453
Strain of Virus: B95-8
GenBank Acc: V01555
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48

Offtargets for "ggcuagauuuccuacaacu" siRNA in Human Genome sequences
See V01555 at Genbank
Pubmed:17108049
Article:Characterization of the uracil-DNA glycosylase activity of Epstein-Barr virus BKRF3 and its role in lytic viral DNA replication.
Authors:Lu CC, Huang HT, Wang JT, Slupphaug G, Li TK, Wu MC, Chen YC, Lee CP, Chen MR.
Journal:J Virol. 2007 Feb;81(3):1195-208. Epub 2006 Nov 15.
Entrez:17108049

siRNA sequence "ggaagaggaaacaggagau" alignment with "Epstein-Barr Virus [EBV]" virus reference Genome sequences
siRNA sequence matching with "ggaagaggaaacaggagau" Epstein-Barr Virus [EBV]" Virus reference Genome sequences
Browse all the records for "Epstein-Barr Virus [EBV]" virus
Browse "virsi1886 " record
Length: 19
GC Content:47 %
Starting position: 110396
Strain of Virus: B95-8
GenBank Acc: V01555
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48

Offtargets for "ggaagaggaaacaggagau" siRNA in Human Genome sequences
See V01555 at Genbank
Pubmed:17108049
Article:Characterization of the uracil-DNA glycosylase activity of Epstein-Barr virus BKRF3 and its role in lytic viral DNA replication.
Authors:Lu CC, Huang HT, Wang JT, Slupphaug G, Li TK, Wu MC, Chen YC, Lee CP, Chen MR.
Journal:J Virol. 2007 Feb;81(3):1195-208. Epub 2006 Nov 15.
Entrez:17108049

siRNA sequence "aagagaccuucucuguccacu" alignment with "Epstein-Barr Virus [EBV]" virus reference Genome sequences
siRNA sequence matching with "aagagaccuucucuguccacu" Epstein-Barr Virus [EBV]" Virus reference Genome sequences
Browse all the records for "Epstein-Barr Virus [EBV]" virus
Browse "virsi1883 " record
Length: 21
GC Content:48 %
Starting position: 291
Strain of Virus: EBV
GenBank Acc: NC_007605
Transfection Reagent: Oligofectamine
Incubation Time (Hours):48

Offtargets for "aagagaccuucucuguccacu" siRNA in Human Genome sequences
See NC_007605 at Genbank
Pubmed:18230756
Article:EBV LMP2A affects LMP1-mediated NF-kappaB signaling and survival of lymphoma cells by regulating TRAF2 expression.
Authors:Guasparri I, Bubman D, Cesarman E.
Journal:Blood. 2008 Apr 1;111(7):3813-20. Epub 2008 Jan 29. Erratum in: Blood. 2008 Jul 15;112(2):452.
Entrez:18230756

siRNA sequence "aacucccaauauccaucugcu" alignment with "Epstein-Barr Virus [EBV]" virus reference Genome sequences
siRNA sequence matching with "aacucccaauauccaucugcu" Epstein-Barr Virus [EBV]" Virus reference Genome sequences
Browse all the records for "Epstein-Barr Virus [EBV]" virus
Browse "virsi1884 " record
Length: 21
GC Content:43 %
Starting position: 82
Strain of Virus: EBV
GenBank Acc: X81780
Transfection Reagent: Oligofectamine

Offtargets for "aacucccaauauccaucugcu" siRNA in Human Genome sequences
See X81780 at Genbank
Pubmed:18230756
Article:EBV LMP2A affects LMP1-mediated NF-kappaB signaling and survival of lymphoma cells by regulating TRAF2 expression.
Authors:Guasparri I, Bubman D, Cesarman E.
Journal:Blood. 2008 Apr 1;111(7):3813-20. Epub 2008 Jan 29. Erratum in: Blood. 2008 Jul 15;112(2):452.
Entrez:18230756

siRNA sequence "acguccaaguugcauuggc" alignment with "Epstein-Barr Virus [EBV]" virus reference Genome sequences
siRNA sequence matching with "acguccaaguugcauuggc" Epstein-Barr Virus [EBV]" Virus reference Genome sequences
Browse all the records for "Epstein-Barr Virus [EBV]" virus
Browse "virsi1853 " record
Length: 19
GC Content:53 %
Starting position: 108174
Strain of Virus: B95-8
GenBank Acc: V01555
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48

Offtargets for "acguccaaguugcauuggc" siRNA in Human Genome sequences
See V01555 at Genbank
Pubmed:16343579
Article:siRNAs against the Epstein Barr virus latency replication factor, EBNA1, inhibit its function and growth of EBV-dependent tumor cells.
Authors:Yin Q, Flemington EK.
Journal:Virology. 2006 Mar 15;346(2):385-93. Epub 2005 Dec 15.
Entrez:16343579

siRNA sequence "ggagguuccaacccgaaau" alignment with "Epstein-Barr Virus [EBV]" virus reference Genome sequences
siRNA sequence matching with "ggagguuccaacccgaaau" Epstein-Barr Virus [EBV]" Virus reference Genome sequences
Browse all the records for "Epstein-Barr Virus [EBV]" virus
Browse "virsi1854 " record
Length: 19
GC Content:53 %
Starting position: 109363
Strain of Virus: B95-8
GenBank Acc: V01555
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48

Offtargets for "ggagguuccaacccgaaau" siRNA in Human Genome sequences
See V01555 at Genbank
Pubmed:16343579
Article:siRNAs against the Epstein Barr virus latency replication factor, EBNA1, inhibit its function and growth of EBV-dependent tumor cells.
Authors:Yin Q, Flemington EK.
Journal:Virology. 2006 Mar 15;346(2):385-93. Epub 2005 Dec 15.
Entrez:16343579

siRNA sequence "ggacuaccgacgaaggaac" alignment with "Epstein-Barr Virus [EBV]" virus reference Genome sequences
siRNA sequence matching with "ggacuaccgacgaaggaac" Epstein-Barr Virus [EBV]" Virus reference Genome sequences
Browse all the records for "Epstein-Barr Virus [EBV]" virus
Browse "virsi1855 " record
Length: 19
GC Content:58 %
Starting position: 109436
Strain of Virus: B95-8
GenBank Acc: V01555
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48

Offtargets for "ggacuaccgacgaaggaac" siRNA in Human Genome sequences
See V01555 at Genbank
Pubmed:16343579
Article:siRNAs against the Epstein Barr virus latency replication factor, EBNA1, inhibit its function and growth of EBV-dependent tumor cells.
Authors:Yin Q, Flemington EK.
Journal:Virology. 2006 Mar 15;346(2):385-93. Epub 2005 Dec 15.
Entrez:16343579

siRNA sequence "guaagaccucccuuuacaaccuaag" alignment with "Epstein-Barr Virus [EBV]" virus reference Genome sequences
siRNA sequence matching with "guaagaccucccuuuacaaccuaag" Epstein-Barr Virus [EBV]" Virus reference Genome sequences
Browse all the records for "Epstein-Barr Virus [EBV]" virus
Browse "virsi1873 " record
Length: 25
GC Content:44 %
Starting position: 109487
Strain of Virus: B95-8
GenBank Acc: V01555
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):72

Offtargets for "guaagaccucccuuuacaaccuaag" siRNA in Human Genome sequences
See V01555 at Genbank
Pubmed:19471888
Article:Maintenance of the viral episome is essential for the cell survival of an Epstein-Barr virus positive gastric carcinoma cell line.
Authors:Oh ST, Kim M, Lee SK.
Journal:Arch Pharm Res. 2009 May;32(5):729-36. Epub 2009 May 27.
Entrez:19471888

siRNA sequence "gcaucguggucaaggagguuccaac" alignment with "Epstein-Barr Virus [EBV]" virus reference Genome sequences
siRNA sequence matching with "gcaucguggucaaggagguuccaac" Epstein-Barr Virus [EBV]" Virus reference Genome sequences
Browse all the records for "Epstein-Barr Virus [EBV]" virus
Browse "virsi1871 " record
Length: 25
GC Content:56 %
Starting position: 109350
Strain of Virus: B95-8
GenBank Acc: V01555
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):72

Offtargets for "gcaucguggucaaggagguuccaac" siRNA in Human Genome sequences
See V01555 at Genbank
Pubmed:19471888
Article:Maintenance of the viral episome is essential for the cell survival of an Epstein-Barr virus positive gastric carcinoma cell line.
Authors:Oh ST, Kim M, Lee SK.
Journal:Arch Pharm Res. 2009 May;32(5):729-36. Epub 2009 May 27.
Entrez:19471888

siRNA sequence "cugcaaagggacccacgguggaacagg" alignment with "Epstein-Barr Virus [EBV]" virus reference Genome sequences
siRNA sequence matching with "cugcaaagggacccacgguggaacagg" Epstein-Barr Virus [EBV]" Virus reference Genome sequences
Browse all the records for "Epstein-Barr Virus [EBV]" virus
Browse "virsi1867 " record
Length: 27
GC Content:63 %
Starting position: 108192
Strain of Virus: B95-8
GenBank Acc: V01555
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):72

Offtargets for "cugcaaagggacccacgguggaacagg" siRNA in Human Genome sequences
See V01555 at Genbank
Pubmed:19471888
Article:Maintenance of the viral episome is essential for the cell survival of an Epstein-Barr virus positive gastric carcinoma cell line.
Authors:Oh ST, Kim M, Lee SK.
Journal:Arch Pharm Res. 2009 May;32(5):729-36. Epub 2009 May 27.
Entrez:19471888

siRNA sequence "cgauuaaggaccuuguuaugacaaa" alignment with "Epstein-Barr Virus [EBV]" virus reference Genome sequences
siRNA sequence matching with "cgauuaaggaccuuguuaugacaaa" Epstein-Barr Virus [EBV]" Virus reference Genome sequences
Browse all the records for "Epstein-Barr Virus [EBV]" virus
Browse "virsi1877 " record
Length: 25
GC Content:36 %
Starting position: 109682
Strain of Virus: B95-8
GenBank Acc: V01555
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):72

Offtargets for "cgauuaaggaccuuguuaugacaaa" siRNA in Human Genome sequences
See V01555 at Genbank
Pubmed:19471888
Article:Maintenance of the viral episome is essential for the cell survival of an Epstein-Barr virus positive gastric carcinoma cell line.
Authors:Oh ST, Kim M, Lee SK.
Journal:Arch Pharm Res. 2009 May;32(5):729-36. Epub 2009 May 27.
Entrez:19471888

siRNA sequence "ccgggagcgauagagcagggccccg" alignment with "Epstein-Barr Virus [EBV]" virus reference Genome sequences
siRNA sequence matching with "ccgggagcgauagagcagggccccg" Epstein-Barr Virus [EBV]" Virus reference Genome sequences
Browse all the records for "Epstein-Barr Virus [EBV]" virus
Browse "virsi1869 " record
Length: 25
GC Content:76 %
Starting position: 109240
Strain of Virus: B95-8
GenBank Acc: V01555
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):72

Offtargets for "ccgggagcgauagagcagggccccg" siRNA in Human Genome sequences
See V01555 at Genbank
Pubmed:19471888
Article:Maintenance of the viral episome is essential for the cell survival of an Epstein-Barr virus positive gastric carcinoma cell line.
Authors:Oh ST, Kim M, Lee SK.
Journal:Arch Pharm Res. 2009 May;32(5):729-36. Epub 2009 May 27.
Entrez:19471888

siRNA sequence "gcccgcuccuaccugcaauaucaagg" alignment with "Epstein-Barr Virus [EBV]" virus reference Genome sequences
siRNA sequence matching with "gcccgcuccuaccugcaauaucaagg" Epstein-Barr Virus [EBV]" Virus reference Genome sequences
Browse all the records for "Epstein-Barr Virus [EBV]" virus
Browse "virsi1878 " record
Length: 26
GC Content:58 %
Starting position: 97337
Strain of Virus: gD1
GenBank Acc: AY961628
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):72

Offtargets for "gcccgcuccuaccugcaauaucaagg" siRNA in Human Genome sequences
See AY961628 at Genbank
Pubmed:19471888
Article:Maintenance of the viral episome is essential for the cell survival of an Epstein-Barr virus positive gastric carcinoma cell line.
Authors:Oh ST, Kim M, Lee SK.
Journal:Arch Pharm Res. 2009 May;32(5):729-36. Epub 2009 May 27.
Entrez:19471888

siRNA sequence "ccuugcuguuccacaaugucguauu" alignment with "Epstein-Barr Virus [EBV]" virus reference Genome sequences
siRNA sequence matching with "ccuugcuguuccacaaugucguauu" Epstein-Barr Virus [EBV]" Virus reference Genome sequences
Browse all the records for "Epstein-Barr Virus [EBV]" virus
Browse "virsi1875 " record
Length: 25
GC Content:44 %
Starting position: 97154
Strain of Virus: gD1
GenBank Acc: AY961628
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):72

Offtargets for "ccuugcuguuccacaaugucguauu" siRNA in Human Genome sequences
See AY961628 at Genbank
Pubmed:19471888
Article:Maintenance of the viral episome is essential for the cell survival of an Epstein-Barr virus positive gastric carcinoma cell line.
Authors:Oh ST, Kim M, Lee SK.
Journal:Arch Pharm Res. 2009 May;32(5):729-36. Epub 2009 May 27.
Entrez:19471888


VIRsiRNAid	siRNA Sequence	Virus_Name	Target Region	Cell Line	Test Object	Efficacy	PMID	Offtarget	Align With	ALIGN0 Result
virsi1874	guaagaccucccuuuacaaccuaag	Epstein-Barr Virus [EBV]	EBNA1	SNU-719	mRNA	41	19471888	Blast SL	refseqs
virsi1872	gcaucguggucaaggagguuccaac	Epstein-Barr Virus [EBV]	EBNA1	SNU-719	mRNA	29	19471888	Blast SL	refseqs
virsi1864	gugauaaccauggacgaggacggggaa	Epstein-Barr Virus [EBV]	EBNA1	SNU-719	mRNA	28	19471888	Blast SL	refseqs
virsi1870	ccgggagcgauagagcagggccccg	Epstein-Barr Virus [EBV]	EBNA1	SNU-719	mRNA	13	19471888	Blast SL	refseqs
virsi1879	gcccgcuccuaccugcaauaucaagg	Epstein-Barr Virus [EBV]	EBNA1	SNU-719	mRNA	13	19471888	Blast SL	refseqs
virsi1881	gauggaguagauuugccucccuggu	Epstein-Barr Virus [EBV]	EBNA1	SNU-719	mRNA	12	19471888	Blast SL	refseqs
virsi1876	ccuugcuguuccacaaugucguauu	Epstein-Barr Virus [EBV]	EBNA1	SNU-719	mRNA	6	19471888	Blast SL	refseqs
virsi1862	cuggaccagaaggcuccggcgg	Epstein-Barr Virus [EBV]	EBNA1	SNU-719	mRNA	0	19471888	Blast SL	refseqs
virsi1866	aagacauagagaugguguccggagac	Epstein-Barr Virus [EBV]	EBNA1	SNU-719	mRNA	0	19471888	Blast SL	refseqs
virsi1868	cugcaaagggacccacgguggaacagg	Epstein-Barr Virus [EBV]	EBNA1	SNU-719	mRNA	0	19471888	Blast SL	refseqs
virsi1859	caacagcuagcagacauug	Epstein-Barr Virus [EBV]	Zta	NPC	Protein	High	15166418	Blast SL	refseqs
virsi1887	ggcuagauuuccuacaacu	Epstein-Barr Virus [EBV]	BKRF3	NA (NPC-TW01)	DNA	20	17108049	Blast SL	refseqs
virsi1886	ggaagaggaaacaggagau	Epstein-Barr Virus [EBV]	BKRF3	NA (NPC-TW01)	DNA	10	17108049	Blast SL	refseqs
virsi1883	aagagaccuucucuguccacu	Epstein-Barr Virus [EBV]	LMP1	IBL-1	Protein	75	18230756	Blast SL	refseqs
virsi1884	aacucccaauauccaucugcu	Epstein-Barr Virus [EBV]	LMP2A	IBL-1	Protein	75	18230756	Blast SL	refseqs
virsi1853	acguccaaguugcauuggc	Epstein-Barr Virus [EBV]	EBNA1	HeLa	Protein	High	16343579	Blast SL	refseqs
virsi1854	ggagguuccaacccgaaau	Epstein-Barr Virus [EBV]	EBNA1	HeLa	Protein	High	16343579	Blast SL	refseqs
virsi1855	ggacuaccgacgaaggaac	Epstein-Barr Virus [EBV]	EBNA1	HeLa	Protein	High	16343579	Blast SL	refseqs
virsi1873	guaagaccucccuuuacaaccuaag	Epstein-Barr Virus [EBV]	EBNA1	HeLa	mRNA	94	19471888	Blast SL	refseqs
virsi1871	gcaucguggucaaggagguuccaac	Epstein-Barr Virus [EBV]	EBNA1	HeLa	mRNA	90	19471888	Blast SL	refseqs
virsi1867	cugcaaagggacccacgguggaacagg	Epstein-Barr Virus [EBV]	EBNA1	HeLa	mRNA	62	19471888	Blast SL	refseqs
virsi1877	cgauuaaggaccuuguuaugacaaa	Epstein-Barr Virus [EBV]	EBNA1	HeLa	mRNA	61	19471888	Blast SL	refseqs
virsi1869	ccgggagcgauagagcagggccccg	Epstein-Barr Virus [EBV]	EBNA1	HeLa	mRNA	48	19471888	Blast SL	refseqs
virsi1878	gcccgcuccuaccugcaauaucaagg	Epstein-Barr Virus [EBV]	EBNA1	HeLa	mRNA	43	19471888	Blast SL	refseqs
virsi1875	ccuugcuguuccacaaugucguauu	Epstein-Barr Virus [EBV]	EBNA1	HeLa	mRNA	25	19471888	Blast SL	refseqs



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: siRNA specific for both strands
: siRNA specific for only one strands
: siRNA Not specific
SL: siRNA seedlocator algorithm