VIRsiRNAdb

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Total number of Results for Epstein-Barr Virus [EBV] are 43
Results from 0 - 25

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siRNA sequence "ggcuagauuuccuacaacu" alignment with "Epstein-Barr Virus [EBV]" virus reference Genome sequences
siRNA sequence matching with "ggcuagauuuccuacaacu" Epstein-Barr Virus [EBV]" Virus reference Genome sequences
Browse all the records for "Epstein-Barr Virus [EBV]" virus
Browse "virsi1887 " record
Length: 19
GC Content:42 %
Starting position: 110453
Strain of Virus: B95-8
GenBank Acc: V01555
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48

Offtargets for "ggcuagauuuccuacaacu" siRNA in Human Genome sequences
See V01555 at Genbank
Pubmed:17108049
Article:Characterization of the uracil-DNA glycosylase activity of Epstein-Barr virus BKRF3 and its role in lytic viral DNA replication.
Authors:Lu CC, Huang HT, Wang JT, Slupphaug G, Li TK, Wu MC, Chen YC, Lee CP, Chen MR.
Journal:J Virol. 2007 Feb;81(3):1195-208. Epub 2006 Nov 15.
Entrez:17108049

siRNA sequence "ggaagaggaaacaggagau" alignment with "Epstein-Barr Virus [EBV]" virus reference Genome sequences
siRNA sequence matching with "ggaagaggaaacaggagau" Epstein-Barr Virus [EBV]" Virus reference Genome sequences
Browse all the records for "Epstein-Barr Virus [EBV]" virus
Browse "virsi1886 " record
Length: 19
GC Content:47 %
Starting position: 110396
Strain of Virus: B95-8
GenBank Acc: V01555
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48

Offtargets for "ggaagaggaaacaggagau" siRNA in Human Genome sequences
See V01555 at Genbank
Pubmed:17108049
Article:Characterization of the uracil-DNA glycosylase activity of Epstein-Barr virus BKRF3 and its role in lytic viral DNA replication.
Authors:Lu CC, Huang HT, Wang JT, Slupphaug G, Li TK, Wu MC, Chen YC, Lee CP, Chen MR.
Journal:J Virol. 2007 Feb;81(3):1195-208. Epub 2006 Nov 15.
Entrez:17108049

siRNA sequence "aacugguggacucuauugg" alignment with "Epstein-Barr Virus [EBV]" virus reference Genome sequences
siRNA sequence matching with "aacugguggacucuauugg" Epstein-Barr Virus [EBV]" Virus reference Genome sequences
Browse all the records for "Epstein-Barr Virus [EBV]" virus
Browse "virsi1857 " record
Length: 19
GC Content:47 %
Starting position: 1044
GenBank Acc: EU910136
Transfection Reagent: Oligofectamine

Offtargets for "aacugguggacucuauugg" siRNA in Human Genome sequences
See EU910136 at Genbank
Pubmed:15013447
Article:Suppression of Epstein-Barr virus-encoded latent membrane protein-1 by RNA interference inhibits the metastatic potential of nasopharyngeal carcinoma cells.
Authors:Li XP, Li G, Peng Y, Kung HF, Lin MC.
Journal:Biochem Biophys Res Commun. 2004 Feb 27;315(1):212-8.
Entrez:15013447

siRNA sequence "guggacagagaaggucucu" alignment with "Epstein-Barr Virus [EBV]" virus reference Genome sequences
siRNA sequence matching with "guggacagagaaggucucu" Epstein-Barr Virus [EBV]" Virus reference Genome sequences
Browse all the records for "Epstein-Barr Virus [EBV]" virus
Browse "virsi1850 " record
Length: 19
GC Content:53 %
Starting position: 622
GenBank Acc: EU910136
Transfection Reagent: Oligofectamine
Incubation Time (Hours):36

Offtargets for "guggacagagaaggucucu" siRNA in Human Genome sequences
See EU910136 at Genbank
Pubmed:15041532
Article:Effect of inhibition of EBV-encoded latent membrane protein-1 by small interfering RNA on EBV-positive nasopharyngeal carcinoma cell growth.
Authors:Li G, Li XP, Peng Y, Liu X, Li XH.
Journal:Di Yi Jun Yi Da Xue Xue Bao. 2004 Mar;24(3):241-6.
Entrez:15041532

siRNA sequence "guaagaccucccuuuacaaccuaag" alignment with "Epstein-Barr Virus [EBV]" virus reference Genome sequences
siRNA sequence matching with "guaagaccucccuuuacaaccuaag" Epstein-Barr Virus [EBV]" Virus reference Genome sequences
Browse all the records for "Epstein-Barr Virus [EBV]" virus
Browse "virsi1873 " record
Length: 25
GC Content:44 %
Starting position: 109487
Strain of Virus: B95-8
GenBank Acc: V01555
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):72

Offtargets for "guaagaccucccuuuacaaccuaag" siRNA in Human Genome sequences
See V01555 at Genbank
Pubmed:19471888
Article:Maintenance of the viral episome is essential for the cell survival of an Epstein-Barr virus positive gastric carcinoma cell line.
Authors:Oh ST, Kim M, Lee SK.
Journal:Arch Pharm Res. 2009 May;32(5):729-36. Epub 2009 May 27.
Entrez:19471888

siRNA sequence "gcaucguggucaaggagguuccaac" alignment with "Epstein-Barr Virus [EBV]" virus reference Genome sequences
siRNA sequence matching with "gcaucguggucaaggagguuccaac" Epstein-Barr Virus [EBV]" Virus reference Genome sequences
Browse all the records for "Epstein-Barr Virus [EBV]" virus
Browse "virsi1871 " record
Length: 25
GC Content:56 %
Starting position: 109350
Strain of Virus: B95-8
GenBank Acc: V01555
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):72

Offtargets for "gcaucguggucaaggagguuccaac" siRNA in Human Genome sequences
See V01555 at Genbank
Pubmed:19471888
Article:Maintenance of the viral episome is essential for the cell survival of an Epstein-Barr virus positive gastric carcinoma cell line.
Authors:Oh ST, Kim M, Lee SK.
Journal:Arch Pharm Res. 2009 May;32(5):729-36. Epub 2009 May 27.
Entrez:19471888

siRNA sequence "ccaauagaguccaccaguu" alignment with "Epstein-Barr Virus [EBV]" virus reference Genome sequences
siRNA sequence matching with "ccaauagaguccaccaguu" Epstein-Barr Virus [EBV]" Virus reference Genome sequences
Browse all the records for "Epstein-Barr Virus [EBV]" virus
Browse "virsi1849 " record
Length: 19
GC Content:47 %
Starting position: 1044
GenBank Acc: EU910136
Transfection Reagent: Oligofectamine
Incubation Time (Hours):72

Offtargets for "ccaauagaguccaccaguu" siRNA in Human Genome sequences
See EU910136 at Genbank
Pubmed:15041532
Article:Effect of inhibition of EBV-encoded latent membrane protein-1 by small interfering RNA on EBV-positive nasopharyngeal carcinoma cell growth.
Authors:Li G, Li XP, Peng Y, Liu X, Li XH.
Journal:Di Yi Jun Yi Da Xue Xue Bao. 2004 Mar;24(3):241-6.
Entrez:15041532

siRNA sequence "aagcacuuuagugaccuggaa" alignment with "Epstein-Barr Virus [EBV]" virus reference Genome sequences
siRNA sequence matching with "aagcacuuuagugaccuggaa" Epstein-Barr Virus [EBV]" Virus reference Genome sequences
Browse all the records for "Epstein-Barr Virus [EBV]" virus
Browse "virsi1846 " record
Length: 21
GC Content:43 %
Starting position: 136954
Strain of Virus: B95-8
GenBank Acc: NC_009334
Transfection Reagent: Jetsi-ENDO
Incubation Time (Hours):72

Offtargets for "aagcacuuuagugaccuggaa" siRNA in Human Genome sequences
See NC_009334 at Genbank
Pubmed:19704168
Article:Inhibition of Epstein-Barr virus replication by small interfering RNA targeting the Epstein-Barr virus protease gene.
Authors:Larrat S, Morand P, Bas A, Vigne S, Crance JM, Boyer V, Nicod S, Grossi L, Buisson M, Burmeister WP, Seigneurin JM, Germi R.
Journal:Antivir Ther. 2009;14(5):655-62.
Entrez:19704168

siRNA sequence "cugcaaagggacccacgguggaacagg" alignment with "Epstein-Barr Virus [EBV]" virus reference Genome sequences
siRNA sequence matching with "cugcaaagggacccacgguggaacagg" Epstein-Barr Virus [EBV]" Virus reference Genome sequences
Browse all the records for "Epstein-Barr Virus [EBV]" virus
Browse "virsi1867 " record
Length: 27
GC Content:63 %
Starting position: 108192
Strain of Virus: B95-8
GenBank Acc: V01555
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):72

Offtargets for "cugcaaagggacccacgguggaacagg" siRNA in Human Genome sequences
See V01555 at Genbank
Pubmed:19471888
Article:Maintenance of the viral episome is essential for the cell survival of an Epstein-Barr virus positive gastric carcinoma cell line.
Authors:Oh ST, Kim M, Lee SK.
Journal:Arch Pharm Res. 2009 May;32(5):729-36. Epub 2009 May 27.
Entrez:19471888

siRNA sequence "cgauuaaggaccuuguuaugacaaa" alignment with "Epstein-Barr Virus [EBV]" virus reference Genome sequences
siRNA sequence matching with "cgauuaaggaccuuguuaugacaaa" Epstein-Barr Virus [EBV]" Virus reference Genome sequences
Browse all the records for "Epstein-Barr Virus [EBV]" virus
Browse "virsi1877 " record
Length: 25
GC Content:36 %
Starting position: 109682
Strain of Virus: B95-8
GenBank Acc: V01555
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):72

Offtargets for "cgauuaaggaccuuguuaugacaaa" siRNA in Human Genome sequences
See V01555 at Genbank
Pubmed:19471888
Article:Maintenance of the viral episome is essential for the cell survival of an Epstein-Barr virus positive gastric carcinoma cell line.
Authors:Oh ST, Kim M, Lee SK.
Journal:Arch Pharm Res. 2009 May;32(5):729-36. Epub 2009 May 27.
Entrez:19471888

siRNA sequence "aaggccaucgaugcuggauuu" alignment with "Epstein-Barr Virus [EBV]" virus reference Genome sequences
siRNA sequence matching with "aaggccaucgaugcuggauuu" Epstein-Barr Virus [EBV]" Virus reference Genome sequences
Browse all the records for "Epstein-Barr Virus [EBV]" virus
Browse "virsi1848 " record
Length: 21
GC Content:48 %
Starting position: 137074
Strain of Virus: B95-8
GenBank Acc: NC_009334
Transfection Reagent: Jetsi-ENDO
Incubation Time (Hours):72

Offtargets for "aaggccaucgaugcuggauuu" siRNA in Human Genome sequences
See NC_009334 at Genbank
Pubmed:19704168
Article:Inhibition of Epstein-Barr virus replication by small interfering RNA targeting the Epstein-Barr virus protease gene.
Authors:Larrat S, Morand P, Bas A, Vigne S, Crance JM, Boyer V, Nicod S, Grossi L, Buisson M, Burmeister WP, Seigneurin JM, Germi R.
Journal:Antivir Ther. 2009;14(5):655-62.
Entrez:19704168

siRNA sequence "aggcaagcuguccuucuuuga" alignment with "Epstein-Barr Virus [EBV]" virus reference Genome sequences
siRNA sequence matching with "aggcaagcuguccuucuuuga" Epstein-Barr Virus [EBV]" Virus reference Genome sequences
Browse all the records for "Epstein-Barr Virus [EBV]" virus
Browse "virsi1845 " record
Length: 21
GC Content:48 %
Starting position: 136857
Strain of Virus: B95-8
GenBank Acc: NC_009334
Transfection Reagent: Jetsi-ENDO
Incubation Time (Hours):72

Offtargets for "aggcaagcuguccuucuuuga" siRNA in Human Genome sequences
See NC_009334 at Genbank
Pubmed:19704168
Article:Inhibition of Epstein-Barr virus replication by small interfering RNA targeting the Epstein-Barr virus protease gene.
Authors:Larrat S, Morand P, Bas A, Vigne S, Crance JM, Boyer V, Nicod S, Grossi L, Buisson M, Burmeister WP, Seigneurin JM, Germi R.
Journal:Antivir Ther. 2009;14(5):655-62.
Entrez:19704168

siRNA sequence "ccgggagcgauagagcagggccccg" alignment with "Epstein-Barr Virus [EBV]" virus reference Genome sequences
siRNA sequence matching with "ccgggagcgauagagcagggccccg" Epstein-Barr Virus [EBV]" Virus reference Genome sequences
Browse all the records for "Epstein-Barr Virus [EBV]" virus
Browse "virsi1869 " record
Length: 25
GC Content:76 %
Starting position: 109240
Strain of Virus: B95-8
GenBank Acc: V01555
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):72

Offtargets for "ccgggagcgauagagcagggccccg" siRNA in Human Genome sequences
See V01555 at Genbank
Pubmed:19471888
Article:Maintenance of the viral episome is essential for the cell survival of an Epstein-Barr virus positive gastric carcinoma cell line.
Authors:Oh ST, Kim M, Lee SK.
Journal:Arch Pharm Res. 2009 May;32(5):729-36. Epub 2009 May 27.
Entrez:19471888

siRNA sequence "gcccgcuccuaccugcaauaucaagg" alignment with "Epstein-Barr Virus [EBV]" virus reference Genome sequences
siRNA sequence matching with "gcccgcuccuaccugcaauaucaagg" Epstein-Barr Virus [EBV]" Virus reference Genome sequences
Browse all the records for "Epstein-Barr Virus [EBV]" virus
Browse "virsi1878 " record
Length: 26
GC Content:58 %
Starting position: 97337
Strain of Virus: gD1
GenBank Acc: AY961628
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):72

Offtargets for "gcccgcuccuaccugcaauaucaagg" siRNA in Human Genome sequences
See AY961628 at Genbank
Pubmed:19471888
Article:Maintenance of the viral episome is essential for the cell survival of an Epstein-Barr virus positive gastric carcinoma cell line.
Authors:Oh ST, Kim M, Lee SK.
Journal:Arch Pharm Res. 2009 May;32(5):729-36. Epub 2009 May 27.
Entrez:19471888

siRNA sequence "guaagaccucccuuuacaaccuaag" alignment with "Epstein-Barr Virus [EBV]" virus reference Genome sequences
siRNA sequence matching with "guaagaccucccuuuacaaccuaag" Epstein-Barr Virus [EBV]" Virus reference Genome sequences
Browse all the records for "Epstein-Barr Virus [EBV]" virus
Browse "virsi1874 " record
Length: 25
GC Content:44 %
Starting position: 109487
Strain of Virus: B95-8
GenBank Acc: V01555
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):72

Offtargets for "guaagaccucccuuuacaaccuaag" siRNA in Human Genome sequences
See V01555 at Genbank
Pubmed:19471888
Article:Maintenance of the viral episome is essential for the cell survival of an Epstein-Barr virus positive gastric carcinoma cell line.
Authors:Oh ST, Kim M, Lee SK.
Journal:Arch Pharm Res. 2009 May;32(5):729-36. Epub 2009 May 27.
Entrez:19471888

siRNA sequence "gcaucguggucaaggagguuccaac" alignment with "Epstein-Barr Virus [EBV]" virus reference Genome sequences
siRNA sequence matching with "gcaucguggucaaggagguuccaac" Epstein-Barr Virus [EBV]" Virus reference Genome sequences
Browse all the records for "Epstein-Barr Virus [EBV]" virus
Browse "virsi1872 " record
Length: 25
GC Content:56 %
Starting position: 109350
Strain of Virus: B95-8
GenBank Acc: V01555
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):72

Offtargets for "gcaucguggucaaggagguuccaac" siRNA in Human Genome sequences
See V01555 at Genbank
Pubmed:19471888
Article:Maintenance of the viral episome is essential for the cell survival of an Epstein-Barr virus positive gastric carcinoma cell line.
Authors:Oh ST, Kim M, Lee SK.
Journal:Arch Pharm Res. 2009 May;32(5):729-36. Epub 2009 May 27.
Entrez:19471888

siRNA sequence "gugauaaccauggacgaggacggggaa" alignment with "Epstein-Barr Virus [EBV]" virus reference Genome sequences
siRNA sequence matching with "gugauaaccauggacgaggacggggaa" Epstein-Barr Virus [EBV]" Virus reference Genome sequences
Browse all the records for "Epstein-Barr Virus [EBV]" virus
Browse "virsi1864 " record
Length: 27
GC Content:56 %
Starting position: 108056
Strain of Virus: B95-8
GenBank Acc: V01555
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):72

Offtargets for "gugauaaccauggacgaggacggggaa" siRNA in Human Genome sequences
See V01555 at Genbank
Pubmed:19471888
Article:Maintenance of the viral episome is essential for the cell survival of an Epstein-Barr virus positive gastric carcinoma cell line.
Authors:Oh ST, Kim M, Lee SK.
Journal:Arch Pharm Res. 2009 May;32(5):729-36. Epub 2009 May 27.
Entrez:19471888

siRNA sequence "ccuugcuguuccacaaugucguauu" alignment with "Epstein-Barr Virus [EBV]" virus reference Genome sequences
siRNA sequence matching with "ccuugcuguuccacaaugucguauu" Epstein-Barr Virus [EBV]" Virus reference Genome sequences
Browse all the records for "Epstein-Barr Virus [EBV]" virus
Browse "virsi1875 " record
Length: 25
GC Content:44 %
Starting position: 97154
Strain of Virus: gD1
GenBank Acc: AY961628
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):72

Offtargets for "ccuugcuguuccacaaugucguauu" siRNA in Human Genome sequences
See AY961628 at Genbank
Pubmed:19471888
Article:Maintenance of the viral episome is essential for the cell survival of an Epstein-Barr virus positive gastric carcinoma cell line.
Authors:Oh ST, Kim M, Lee SK.
Journal:Arch Pharm Res. 2009 May;32(5):729-36. Epub 2009 May 27.
Entrez:19471888

siRNA sequence "gauggaguagauuugccucccuggu" alignment with "Epstein-Barr Virus [EBV]" virus reference Genome sequences
siRNA sequence matching with "gauggaguagauuugccucccuggu" Epstein-Barr Virus [EBV]" Virus reference Genome sequences
Browse all the records for "Epstein-Barr Virus [EBV]" virus
Browse "virsi1880 " record
Length: 25
GC Content:52 %
Starting position: 97383
Strain of Virus: gD1
GenBank Acc: AY961628
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):72

Offtargets for "gauggaguagauuugccucccuggu" siRNA in Human Genome sequences
See AY961628 at Genbank
Pubmed:19471888
Article:Maintenance of the viral episome is essential for the cell survival of an Epstein-Barr virus positive gastric carcinoma cell line.
Authors:Oh ST, Kim M, Lee SK.
Journal:Arch Pharm Res. 2009 May;32(5):729-36. Epub 2009 May 27.
Entrez:19471888

siRNA sequence "ccgggagcgauagagcagggccccg" alignment with "Epstein-Barr Virus [EBV]" virus reference Genome sequences
siRNA sequence matching with "ccgggagcgauagagcagggccccg" Epstein-Barr Virus [EBV]" Virus reference Genome sequences
Browse all the records for "Epstein-Barr Virus [EBV]" virus
Browse "virsi1870 " record
Length: 25
GC Content:76 %
Starting position: 109240
Strain of Virus: B95-8
GenBank Acc: V01555
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):72

Offtargets for "ccgggagcgauagagcagggccccg" siRNA in Human Genome sequences
See V01555 at Genbank
Pubmed:19471888
Article:Maintenance of the viral episome is essential for the cell survival of an Epstein-Barr virus positive gastric carcinoma cell line.
Authors:Oh ST, Kim M, Lee SK.
Journal:Arch Pharm Res. 2009 May;32(5):729-36. Epub 2009 May 27.
Entrez:19471888

siRNA sequence "gcccgcuccuaccugcaauaucaagg" alignment with "Epstein-Barr Virus [EBV]" virus reference Genome sequences
siRNA sequence matching with "gcccgcuccuaccugcaauaucaagg" Epstein-Barr Virus [EBV]" Virus reference Genome sequences
Browse all the records for "Epstein-Barr Virus [EBV]" virus
Browse "virsi1879 " record
Length: 26
GC Content:58 %
Starting position: 97337
Strain of Virus: gD1
GenBank Acc: AY961628
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):72

Offtargets for "gcccgcuccuaccugcaauaucaagg" siRNA in Human Genome sequences
See AY961628 at Genbank
Pubmed:19471888
Article:Maintenance of the viral episome is essential for the cell survival of an Epstein-Barr virus positive gastric carcinoma cell line.
Authors:Oh ST, Kim M, Lee SK.
Journal:Arch Pharm Res. 2009 May;32(5):729-36. Epub 2009 May 27.
Entrez:19471888

siRNA sequence "gauggaguagauuugccucccuggu" alignment with "Epstein-Barr Virus [EBV]" virus reference Genome sequences
siRNA sequence matching with "gauggaguagauuugccucccuggu" Epstein-Barr Virus [EBV]" Virus reference Genome sequences
Browse all the records for "Epstein-Barr Virus [EBV]" virus
Browse "virsi1881 " record
Length: 25
GC Content:52 %
Starting position: 97383
Strain of Virus: gD1
GenBank Acc: AY961628
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):72

Offtargets for "gauggaguagauuugccucccuggu" siRNA in Human Genome sequences
See AY961628 at Genbank
Pubmed:19471888
Article:Maintenance of the viral episome is essential for the cell survival of an Epstein-Barr virus positive gastric carcinoma cell line.
Authors:Oh ST, Kim M, Lee SK.
Journal:Arch Pharm Res. 2009 May;32(5):729-36. Epub 2009 May 27.
Entrez:19471888

siRNA sequence "aaggcacuucagagcccacca" alignment with "Epstein-Barr Virus [EBV]" virus reference Genome sequences
siRNA sequence matching with "aaggcacuucagagcccacca" Epstein-Barr Virus [EBV]" Virus reference Genome sequences
Browse all the records for "Epstein-Barr Virus [EBV]" virus
Browse "virsi1847 " record
Length: 21
GC Content:57 %
Starting position: 137200
Strain of Virus: B95-8
GenBank Acc: NC_009334
Transfection Reagent: Jetsi-ENDO
Incubation Time (Hours):72

Offtargets for "aaggcacuucagagcccacca" siRNA in Human Genome sequences
See NC_009334 at Genbank
Pubmed:19704168
Article:Inhibition of Epstein-Barr virus replication by small interfering RNA targeting the Epstein-Barr virus protease gene.
Authors:Larrat S, Morand P, Bas A, Vigne S, Crance JM, Boyer V, Nicod S, Grossi L, Buisson M, Burmeister WP, Seigneurin JM, Germi R.
Journal:Antivir Ther. 2009;14(5):655-62.
Entrez:19704168

siRNA sequence "ccuugcuguuccacaaugucguauu" alignment with "Epstein-Barr Virus [EBV]" virus reference Genome sequences
siRNA sequence matching with "ccuugcuguuccacaaugucguauu" Epstein-Barr Virus [EBV]" Virus reference Genome sequences
Browse all the records for "Epstein-Barr Virus [EBV]" virus
Browse "virsi1876 " record
Length: 25
GC Content:44 %
Starting position: 97154
Strain of Virus: gD1
GenBank Acc: AY961628
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):72

Offtargets for "ccuugcuguuccacaaugucguauu" siRNA in Human Genome sequences
See AY961628 at Genbank
Pubmed:19471888
Article:Maintenance of the viral episome is essential for the cell survival of an Epstein-Barr virus positive gastric carcinoma cell line.
Authors:Oh ST, Kim M, Lee SK.
Journal:Arch Pharm Res. 2009 May;32(5):729-36. Epub 2009 May 27.
Entrez:19471888

siRNA sequence "cuggaccagaaggcuccggcgg" alignment with "Epstein-Barr Virus [EBV]" virus reference Genome sequences
siRNA sequence matching with "cuggaccagaaggcuccggcgg" Epstein-Barr Virus [EBV]" Virus reference Genome sequences
Browse all the records for "Epstein-Barr Virus [EBV]" virus
Browse "virsi1861 " record
Length: 22
GC Content:73 %
Starting position: 108011
Strain of Virus: B95-8
GenBank Acc: V01555
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):72

Offtargets for "cuggaccagaaggcuccggcgg" siRNA in Human Genome sequences
See V01555 at Genbank
Pubmed:19471888
Article:Maintenance of the viral episome is essential for the cell survival of an Epstein-Barr virus positive gastric carcinoma cell line.
Authors:Oh ST, Kim M, Lee SK.
Journal:Arch Pharm Res. 2009 May;32(5):729-36. Epub 2009 May 27.
Entrez:19471888


VIRsiRNAid	siRNA Sequence	Virus_Name	Target Region	Cell Line	Test Object	Efficacy	PMID	Offtarget	Align With	ALIGN0 Result
virsi1887	ggcuagauuuccuacaacu	Epstein-Barr Virus [EBV]	BKRF3	NA (NPC-TW01)	DNA	20	17108049	Blast SL	refseqs
virsi1886	ggaagaggaaacaggagau	Epstein-Barr Virus [EBV]	BKRF3	NA (NPC-TW01)	DNA	10	17108049	Blast SL	refseqs
virsi1857	aacugguggacucuauugg	Epstein-Barr Virus [EBV]	LMP1	C666	mRNA	High	15013447	Blast SL	refseqs
virsi1850	guggacagagaaggucucu	Epstein-Barr Virus [EBV]	LMP1	C666-1	mRNA	High	15041532	Blast SL	refseqs
virsi1873	guaagaccucccuuuacaaccuaag	Epstein-Barr Virus [EBV]	EBNA1	HeLa	mRNA	94	19471888	Blast SL	refseqs
virsi1871	gcaucguggucaaggagguuccaac	Epstein-Barr Virus [EBV]	EBNA1	HeLa	mRNA	90	19471888	Blast SL	refseqs
virsi1849	ccaauagaguccaccaguu	Epstein-Barr Virus [EBV]	LMP1	C666-1	mRNA	76	15041532	Blast SL	refseqs
virsi1846	aagcacuuuagugaccuggaa	Epstein-Barr Virus [EBV]	PR	293/EBV-GFP	mRNA	64	19704168	Blast SL	refseqs
virsi1867	cugcaaagggacccacgguggaacagg	Epstein-Barr Virus [EBV]	EBNA1	HeLa	mRNA	62	19471888	Blast SL	refseqs
virsi1877	cgauuaaggaccuuguuaugacaaa	Epstein-Barr Virus [EBV]	EBNA1	HeLa	mRNA	61	19471888	Blast SL	refseqs
virsi1848	aaggccaucgaugcuggauuu	Epstein-Barr Virus [EBV]	PR	293/EBV-GFP	mRNA	54	19704168	Blast SL	refseqs
virsi1845	aggcaagcuguccuucuuuga	Epstein-Barr Virus [EBV]	PR	293/EBV-GFP	mRNA	48	19704168	Blast SL	refseqs
virsi1869	ccgggagcgauagagcagggccccg	Epstein-Barr Virus [EBV]	EBNA1	HeLa	mRNA	48	19471888	Blast SL	refseqs
virsi1878	gcccgcuccuaccugcaauaucaagg	Epstein-Barr Virus [EBV]	EBNA1	HeLa	mRNA	43	19471888	Blast SL	refseqs
virsi1874	guaagaccucccuuuacaaccuaag	Epstein-Barr Virus [EBV]	EBNA1	SNU-719	mRNA	41	19471888	Blast SL	refseqs
virsi1872	gcaucguggucaaggagguuccaac	Epstein-Barr Virus [EBV]	EBNA1	SNU-719	mRNA	29	19471888	Blast SL	refseqs
virsi1864	gugauaaccauggacgaggacggggaa	Epstein-Barr Virus [EBV]	EBNA1	SNU-719	mRNA	28	19471888	Blast SL	refseqs
virsi1875	ccuugcuguuccacaaugucguauu	Epstein-Barr Virus [EBV]	EBNA1	HeLa	mRNA	25	19471888	Blast SL	refseqs
virsi1880	gauggaguagauuugccucccuggu	Epstein-Barr Virus [EBV]	EBNA1	HeLa	mRNA	22	19471888	Blast SL	refseqs
virsi1870	ccgggagcgauagagcagggccccg	Epstein-Barr Virus [EBV]	EBNA1	SNU-719	mRNA	13	19471888	Blast SL	refseqs
virsi1879	gcccgcuccuaccugcaauaucaagg	Epstein-Barr Virus [EBV]	EBNA1	SNU-719	mRNA	13	19471888	Blast SL	refseqs
virsi1881	gauggaguagauuugccucccuggu	Epstein-Barr Virus [EBV]	EBNA1	SNU-719	mRNA	12	19471888	Blast SL	refseqs
virsi1847	aaggcacuucagagcccacca	Epstein-Barr Virus [EBV]	PR	293/EBV-GFP	mRNA	7	19704168	Blast SL	refseqs
virsi1876	ccuugcuguuccacaaugucguauu	Epstein-Barr Virus [EBV]	EBNA1	SNU-719	mRNA	6	19471888	Blast SL	refseqs
virsi1861	cuggaccagaaggcuccggcgg	Epstein-Barr Virus [EBV]	EBNA1	HeLa	mRNA	0	19471888	Blast SL	refseqs



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: siRNA specific for both strands
: siRNA specific for only one strands
: siRNA Not specific
SL: siRNA seedlocator algorithm