VIRsiRNAdb

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Total number of Results for Human Rhinovirus are 22
Results from 0 - 25

siRNA sequence "gccuagugacauguaugug" alignment with "Human Rhinovirus" virus reference Genome sequences
siRNA sequence matching with "gccuagugacauguaugug" Human Rhinovirus" Virus reference Genome sequences
Browse all the records for "Human Rhinovirus" virus
Browse "virsi2035 " record
Length: 19
GC Content:47 %
GenBank Acc: L24917
Transfection Reagent: Oligofectamine
Incubation Time (Hours):72

Offtargets for "gccuagugacauguaugug" siRNA in Human Genome sequences
See L24917 at Genbank
Pubmed:14670593
Article:Small interfering RNA molecules as potential anti-human rhinovirus agents: in vitro potency, specificity, and mechanism.
Authors:Phipps KM, Martinez A, Lu J, Heinz BA, Zhao G.
Journal:Antiviral Res. 2004 Jan;61(1):49-55.
Entrez:14670593

siRNA sequence "cucuucagauccgcaaaca" alignment with "Human Rhinovirus" virus reference Genome sequences
siRNA sequence matching with "cucuucagauccgcaaaca" Human Rhinovirus" Virus reference Genome sequences
Browse all the records for "Human Rhinovirus" virus
Browse "virsi2036 " record
Length: 19
GC Content:47 %
GenBank Acc: L24917
Transfection Reagent: Oligofectamine
Incubation Time (Hours):72

Offtargets for "cucuucagauccgcaaaca" siRNA in Human Genome sequences
See L24917 at Genbank
Pubmed:14670593
Article:Small interfering RNA molecules as potential anti-human rhinovirus agents: in vitro potency, specificity, and mechanism.
Authors:Phipps KM, Martinez A, Lu J, Heinz BA, Zhao G.
Journal:Antiviral Res. 2004 Jan;61(1):49-55.
Entrez:14670593

siRNA sequence "cagagcagcugauacuaac" alignment with "Human Rhinovirus" virus reference Genome sequences
siRNA sequence matching with "cagagcagcugauacuaac" Human Rhinovirus" Virus reference Genome sequences
Browse all the records for "Human Rhinovirus" virus
Browse "virsi2037 " record
Length: 19
GC Content:47 %
GenBank Acc: L24917
Transfection Reagent: Oligofectamine
Incubation Time (Hours):72

Offtargets for "cagagcagcugauacuaac" siRNA in Human Genome sequences
See L24917 at Genbank
Pubmed:14670593
Article:Small interfering RNA molecules as potential anti-human rhinovirus agents: in vitro potency, specificity, and mechanism.
Authors:Phipps KM, Martinez A, Lu J, Heinz BA, Zhao G.
Journal:Antiviral Res. 2004 Jan;61(1):49-55.
Entrez:14670593

siRNA sequence "aucacucacucuuggcacc" alignment with "Human Rhinovirus" virus reference Genome sequences
siRNA sequence matching with "aucacucacucuuggcacc" Human Rhinovirus" Virus reference Genome sequences
Browse all the records for "Human Rhinovirus" virus
Browse "virsi2038 " record
Length: 19
GC Content:53 %
GenBank Acc: L24917
Transfection Reagent: Oligofectamine
Incubation Time (Hours):72

Offtargets for "aucacucacucuuggcacc" siRNA in Human Genome sequences
See L24917 at Genbank
Pubmed:14670593
Article:Small interfering RNA molecules as potential anti-human rhinovirus agents: in vitro potency, specificity, and mechanism.
Authors:Phipps KM, Martinez A, Lu J, Heinz BA, Zhao G.
Journal:Antiviral Res. 2004 Jan;61(1):49-55.
Entrez:14670593

siRNA sequence "cgcucaguaaggacaccag" alignment with "Human Rhinovirus" virus reference Genome sequences
siRNA sequence matching with "cgcucaguaaggacaccag" Human Rhinovirus" Virus reference Genome sequences
Browse all the records for "Human Rhinovirus" virus
Browse "virsi2039 " record
Length: 19
GC Content:58 %
GenBank Acc: L24917
Transfection Reagent: Oligofectamine
Incubation Time (Hours):72

Offtargets for "cgcucaguaaggacaccag" siRNA in Human Genome sequences
See L24917 at Genbank
Pubmed:14670593
Article:Small interfering RNA molecules as potential anti-human rhinovirus agents: in vitro potency, specificity, and mechanism.
Authors:Phipps KM, Martinez A, Lu J, Heinz BA, Zhao G.
Journal:Antiviral Res. 2004 Jan;61(1):49-55.
Entrez:14670593

siRNA sequence "gguggcaaugguagagaug" alignment with "Human Rhinovirus" virus reference Genome sequences
siRNA sequence matching with "gguggcaaugguagagaug" Human Rhinovirus" Virus reference Genome sequences
Browse all the records for "Human Rhinovirus" virus
Browse "virsi2041 " record
Length: 19
GC Content:53 %
GenBank Acc: L24917
Transfection Reagent: Oligofectamine
Incubation Time (Hours):72

Offtargets for "gguggcaaugguagagaug" siRNA in Human Genome sequences
See L24917 at Genbank
Pubmed:14670593
Article:Small interfering RNA molecules as potential anti-human rhinovirus agents: in vitro potency, specificity, and mechanism.
Authors:Phipps KM, Martinez A, Lu J, Heinz BA, Zhao G.
Journal:Antiviral Res. 2004 Jan;61(1):49-55.
Entrez:14670593

siRNA sequence "uaccaacacaugcugaccc" alignment with "Human Rhinovirus" virus reference Genome sequences
siRNA sequence matching with "uaccaacacaugcugaccc" Human Rhinovirus" Virus reference Genome sequences
Browse all the records for "Human Rhinovirus" virus
Browse "virsi2040 " record
Length: 19
GC Content:53 %
GenBank Acc: L24917
Transfection Reagent: Oligofectamine
Incubation Time (Hours):72

Offtargets for "uaccaacacaugcugaccc" siRNA in Human Genome sequences
See L24917 at Genbank
Pubmed:14670593
Article:Small interfering RNA molecules as potential anti-human rhinovirus agents: in vitro potency, specificity, and mechanism.
Authors:Phipps KM, Martinez A, Lu J, Heinz BA, Zhao G.
Journal:Antiviral Res. 2004 Jan;61(1):49-55.
Entrez:14670593

siRNA sequence "ccuugauguuagauggaga" alignment with "Human Rhinovirus" virus reference Genome sequences
siRNA sequence matching with "ccuugauguuagauggaga" Human Rhinovirus" Virus reference Genome sequences
Browse all the records for "Human Rhinovirus" virus
Browse "virsi2043 " record
Length: 19
GC Content:42 %
GenBank Acc: L24917
Transfection Reagent: Oligofectamine
Incubation Time (Hours):72

Offtargets for "ccuugauguuagauggaga" siRNA in Human Genome sequences
See L24917 at Genbank
Pubmed:14670593
Article:Small interfering RNA molecules as potential anti-human rhinovirus agents: in vitro potency, specificity, and mechanism.
Authors:Phipps KM, Martinez A, Lu J, Heinz BA, Zhao G.
Journal:Antiviral Res. 2004 Jan;61(1):49-55.
Entrez:14670593

siRNA sequence "cuccuaagacaugaauggu" alignment with "Human Rhinovirus" virus reference Genome sequences
siRNA sequence matching with "cuccuaagacaugaauggu" Human Rhinovirus" Virus reference Genome sequences
Browse all the records for "Human Rhinovirus" virus
Browse "virsi2045 " record
Length: 19
GC Content:42 %
GenBank Acc: L24917
Transfection Reagent: Oligofectamine
Incubation Time (Hours):72

Offtargets for "cuccuaagacaugaauggu" siRNA in Human Genome sequences
See L24917 at Genbank
Pubmed:14670593
Article:Small interfering RNA molecules as potential anti-human rhinovirus agents: in vitro potency, specificity, and mechanism.
Authors:Phipps KM, Martinez A, Lu J, Heinz BA, Zhao G.
Journal:Antiviral Res. 2004 Jan;61(1):49-55.
Entrez:14670593

siRNA sequence "gaagccauagccaaggaag" alignment with "Human Rhinovirus" virus reference Genome sequences
siRNA sequence matching with "gaagccauagccaaggaag" Human Rhinovirus" Virus reference Genome sequences
Browse all the records for "Human Rhinovirus" virus
Browse "virsi2044 " record
Length: 19
GC Content:53 %
GenBank Acc: L24917
Transfection Reagent: Oligofectamine
Incubation Time (Hours):72

Offtargets for "gaagccauagccaaggaag" siRNA in Human Genome sequences
See L24917 at Genbank
Pubmed:14670593
Article:Small interfering RNA molecules as potential anti-human rhinovirus agents: in vitro potency, specificity, and mechanism.
Authors:Phipps KM, Martinez A, Lu J, Heinz BA, Zhao G.
Journal:Antiviral Res. 2004 Jan;61(1):49-55.
Entrez:14670593

siRNA sequence "gauggcuuggaagcuuugg" alignment with "Human Rhinovirus" virus reference Genome sequences
siRNA sequence matching with "gauggcuuggaagcuuugg" Human Rhinovirus" Virus reference Genome sequences
Browse all the records for "Human Rhinovirus" virus
Browse "virsi2042 " record
Length: 19
GC Content:53 %
GenBank Acc: L24917
Transfection Reagent: Oligofectamine
Incubation Time (Hours):72

Offtargets for "gauggcuuggaagcuuugg" siRNA in Human Genome sequences
See L24917 at Genbank
Pubmed:14670593
Article:Small interfering RNA molecules as potential anti-human rhinovirus agents: in vitro potency, specificity, and mechanism.
Authors:Phipps KM, Martinez A, Lu J, Heinz BA, Zhao G.
Journal:Antiviral Res. 2004 Jan;61(1):49-55.
Entrez:14670593

siRNA sequence "ccaacaguagaccugguag" alignment with "Human Rhinovirus" virus reference Genome sequences
siRNA sequence matching with "ccaacaguagaccugguag" Human Rhinovirus" Virus reference Genome sequences
Browse all the records for "Human Rhinovirus" virus
Browse "virsi2025 " record
Length: 19
GC Content:53 %
GenBank Acc: L24917
Transfection Reagent: Oligofectamine
Incubation Time (Hours):72

Offtargets for "ccaacaguagaccugguag" siRNA in Human Genome sequences
See L24917 at Genbank
Pubmed:14670593
Article:Small interfering RNA molecules as potential anti-human rhinovirus agents: in vitro potency, specificity, and mechanism.
Authors:Phipps KM, Martinez A, Lu J, Heinz BA, Zhao G.
Journal:Antiviral Res. 2004 Jan;61(1):49-55.
Entrez:14670593

siRNA sequence "cgguaaucuuguacgccag" alignment with "Human Rhinovirus" virus reference Genome sequences
siRNA sequence matching with "cgguaaucuuguacgccag" Human Rhinovirus" Virus reference Genome sequences
Browse all the records for "Human Rhinovirus" virus
Browse "virsi2024 " record
Length: 19
GC Content:53 %
GenBank Acc: L24917
Transfection Reagent: Oligofectamine
Incubation Time (Hours):72

Offtargets for "cgguaaucuuguacgccag" siRNA in Human Genome sequences
See L24917 at Genbank
Pubmed:14670593
Article:Small interfering RNA molecules as potential anti-human rhinovirus agents: in vitro potency, specificity, and mechanism.
Authors:Phipps KM, Martinez A, Lu J, Heinz BA, Zhao G.
Journal:Antiviral Res. 2004 Jan;61(1):49-55.
Entrez:14670593

siRNA sequence "gugcacacaauccagugug" alignment with "Human Rhinovirus" virus reference Genome sequences
siRNA sequence matching with "gugcacacaauccagugug" Human Rhinovirus" Virus reference Genome sequences
Browse all the records for "Human Rhinovirus" virus
Browse "virsi2026 " record
Length: 19
GC Content:53 %
GenBank Acc: L24917
Transfection Reagent: Oligofectamine
Incubation Time (Hours):72

Offtargets for "gugcacacaauccagugug" siRNA in Human Genome sequences
See L24917 at Genbank
Pubmed:14670593
Article:Small interfering RNA molecules as potential anti-human rhinovirus agents: in vitro potency, specificity, and mechanism.
Authors:Phipps KM, Martinez A, Lu J, Heinz BA, Zhao G.
Journal:Antiviral Res. 2004 Jan;61(1):49-55.
Entrez:14670593

siRNA sequence "caggagcaccuauaccaac" alignment with "Human Rhinovirus" virus reference Genome sequences
siRNA sequence matching with "caggagcaccuauaccaac" Human Rhinovirus" Virus reference Genome sequences
Browse all the records for "Human Rhinovirus" virus
Browse "virsi2034 " record
Length: 19
GC Content:53 %
GenBank Acc: L24917
Transfection Reagent: Oligofectamine
Incubation Time (Hours):72

Offtargets for "caggagcaccuauaccaac" siRNA in Human Genome sequences
See L24917 at Genbank
Pubmed:14670593
Article:Small interfering RNA molecules as potential anti-human rhinovirus agents: in vitro potency, specificity, and mechanism.
Authors:Phipps KM, Martinez A, Lu J, Heinz BA, Zhao G.
Journal:Antiviral Res. 2004 Jan;61(1):49-55.
Entrez:14670593

siRNA sequence "uaccacaucaaaugcagcc" alignment with "Human Rhinovirus" virus reference Genome sequences
siRNA sequence matching with "uaccacaucaaaugcagcc" Human Rhinovirus" Virus reference Genome sequences
Browse all the records for "Human Rhinovirus" virus
Browse "virsi2033 " record
Length: 19
GC Content:47 %
GenBank Acc: L24917
Transfection Reagent: Oligofectamine
Incubation Time (Hours):72

Offtargets for "uaccacaucaaaugcagcc" siRNA in Human Genome sequences
See L24917 at Genbank
Pubmed:14670593
Article:Small interfering RNA molecules as potential anti-human rhinovirus agents: in vitro potency, specificity, and mechanism.
Authors:Phipps KM, Martinez A, Lu J, Heinz BA, Zhao G.
Journal:Antiviral Res. 2004 Jan;61(1):49-55.
Entrez:14670593

siRNA sequence "gagaaacaaccuagugaug" alignment with "Human Rhinovirus" virus reference Genome sequences
siRNA sequence matching with "gagaaacaaccuagugaug" Human Rhinovirus" Virus reference Genome sequences
Browse all the records for "Human Rhinovirus" virus
Browse "virsi2029 " record
Length: 19
GC Content:42 %
GenBank Acc: L24917
Transfection Reagent: Oligofectamine
Incubation Time (Hours):72

Offtargets for "gagaaacaaccuagugaug" siRNA in Human Genome sequences
See L24917 at Genbank
Pubmed:14670593
Article:Small interfering RNA molecules as potential anti-human rhinovirus agents: in vitro potency, specificity, and mechanism.
Authors:Phipps KM, Martinez A, Lu J, Heinz BA, Zhao G.
Journal:Antiviral Res. 2004 Jan;61(1):49-55.
Entrez:14670593

siRNA sequence "aggaugcaacggcuauaga" alignment with "Human Rhinovirus" virus reference Genome sequences
siRNA sequence matching with "aggaugcaacggcuauaga" Human Rhinovirus" Virus reference Genome sequences
Browse all the records for "Human Rhinovirus" virus
Browse "virsi2028 " record
Length: 19
GC Content:47 %
GenBank Acc: L24917
Transfection Reagent: Oligofectamine
Incubation Time (Hours):72

Offtargets for "aggaugcaacggcuauaga" siRNA in Human Genome sequences
See L24917 at Genbank
Pubmed:14670593
Article:Small interfering RNA molecules as potential anti-human rhinovirus agents: in vitro potency, specificity, and mechanism.
Authors:Phipps KM, Martinez A, Lu J, Heinz BA, Zhao G.
Journal:Antiviral Res. 2004 Jan;61(1):49-55.
Entrez:14670593

siRNA sequence "ggacugcaaacacuaccuu" alignment with "Human Rhinovirus" virus reference Genome sequences
siRNA sequence matching with "ggacugcaaacacuaccuu" Human Rhinovirus" Virus reference Genome sequences
Browse all the records for "Human Rhinovirus" virus
Browse "virsi2031 " record
Length: 19
GC Content:47 %
GenBank Acc: L24917
Transfection Reagent: Oligofectamine
Incubation Time (Hours):72

Offtargets for "ggacugcaaacacuaccuu" siRNA in Human Genome sequences
See L24917 at Genbank
Pubmed:14670593
Article:Small interfering RNA molecules as potential anti-human rhinovirus agents: in vitro potency, specificity, and mechanism.
Authors:Phipps KM, Martinez A, Lu J, Heinz BA, Zhao G.
Journal:Antiviral Res. 2004 Jan;61(1):49-55.
Entrez:14670593

siRNA sequence "ccagacacauacuccucag" alignment with "Human Rhinovirus" virus reference Genome sequences
siRNA sequence matching with "ccagacacauacuccucag" Human Rhinovirus" Virus reference Genome sequences
Browse all the records for "Human Rhinovirus" virus
Browse "virsi2032 " record
Length: 19
GC Content:53 %
GenBank Acc: L24917
Transfection Reagent: Oligofectamine
Incubation Time (Hours):72

Offtargets for "ccagacacauacuccucag" siRNA in Human Genome sequences
See L24917 at Genbank
Pubmed:14670593
Article:Small interfering RNA molecules as potential anti-human rhinovirus agents: in vitro potency, specificity, and mechanism.
Authors:Phipps KM, Martinez A, Lu J, Heinz BA, Zhao G.
Journal:Antiviral Res. 2004 Jan;61(1):49-55.
Entrez:14670593

siRNA sequence "uccaugugcacugccuugg" alignment with "Human Rhinovirus" virus reference Genome sequences
siRNA sequence matching with "uccaugugcacugccuugg" Human Rhinovirus" Virus reference Genome sequences
Browse all the records for "Human Rhinovirus" virus
Browse "virsi2030 " record
Length: 19
GC Content:58 %
GenBank Acc: L24917
Transfection Reagent: Oligofectamine
Incubation Time (Hours):72

Offtargets for "uccaugugcacugccuugg" siRNA in Human Genome sequences
See L24917 at Genbank
Pubmed:14670593
Article:Small interfering RNA molecules as potential anti-human rhinovirus agents: in vitro potency, specificity, and mechanism.
Authors:Phipps KM, Martinez A, Lu J, Heinz BA, Zhao G.
Journal:Antiviral Res. 2004 Jan;61(1):49-55.
Entrez:14670593

siRNA sequence "gaugcagcuuccaguggug" alignment with "Human Rhinovirus" virus reference Genome sequences
siRNA sequence matching with "gaugcagcuuccaguggug" Human Rhinovirus" Virus reference Genome sequences
Browse all the records for "Human Rhinovirus" virus
Browse "virsi2027 " record
Length: 19
GC Content:58 %
GenBank Acc: L24917
Transfection Reagent: Oligofectamine
Incubation Time (Hours):72

Offtargets for "gaugcagcuuccaguggug" siRNA in Human Genome sequences
See L24917 at Genbank
Pubmed:14670593
Article:Small interfering RNA molecules as potential anti-human rhinovirus agents: in vitro potency, specificity, and mechanism.
Authors:Phipps KM, Martinez A, Lu J, Heinz BA, Zhao G.
Journal:Antiviral Res. 2004 Jan;61(1):49-55.
Entrez:14670593


VIRsiRNAid	siRNA Sequence	Virus_Name	Target Region	Cell Line	Test Object	Efficacy	PMID	Offtarget	Align With	ALIGN0 Result
virsi2035	gccuagugacauguaugug	Human Rhinovirus	2A	HeLa	Plaque Count	4	14670593	Blast SL	refseqs
virsi2036	cucuucagauccgcaaaca	Human Rhinovirus	2C	HeLa	Plaque Count	90	14670593	Blast SL	refseqs
virsi2037	cagagcagcugauacuaac	Human Rhinovirus	2C	HeLa	Plaque Count	80	14670593	Blast SL	refseqs
virsi2038	aucacucacucuuggcacc	Human Rhinovirus	2C	HeLa	Plaque Count	49	14670593	Blast SL	refseqs
virsi2039	cgcucaguaaggacaccag	Human Rhinovirus	3A	HeLa	Plaque Count	80	14670593	Blast SL	refseqs
virsi2041	gguggcaaugguagagaug	Human Rhinovirus	3C	HeLa	Plaque Count	61	14670593	Blast SL	refseqs
virsi2040	uaccaacacaugcugaccc	Human Rhinovirus	3C	HeLa	Plaque Count	9	14670593	Blast SL	refseqs
virsi2043	ccuugauguuagauggaga	Human Rhinovirus	3D	HeLa	Plaque Count	94	14670593	Blast SL	refseqs
virsi2045	cuccuaagacaugaauggu	Human Rhinovirus	3D	HeLa	Plaque Count	71	14670593	Blast SL	refseqs
virsi2044	gaagccauagccaaggaag	Human Rhinovirus	3D	HeLa	Plaque Count	66	14670593	Blast SL	refseqs
virsi2042	gauggcuuggaagcuuugg	Human Rhinovirus	3D	HeLa	Plaque Count	35	14670593	Blast SL	refseqs
virsi2025	ccaacaguagaccugguag	Human Rhinovirus	5'UTR	HeLa	Plaque Count	7	14670593	Blast SL	refseqs
virsi2024	cgguaaucuuguacgccag	Human Rhinovirus	5'UTR	HeLa	Plaque Count	6	14670593	Blast SL	refseqs
virsi2026	gugcacacaauccagugug	Human Rhinovirus	5'UTR	HeLa	Plaque Count	5	14670593	Blast SL	refseqs
virsi2034	caggagcaccuauaccaac	Human Rhinovirus	VP1	HeLa	Plaque Count	77	14670593	Blast SL	refseqs
virsi2033	uaccacaucaaaugcagcc	Human Rhinovirus	VP1	HeLa	Plaque Count	7	14670593	Blast SL	refseqs
virsi2029	gagaaacaaccuagugaug	Human Rhinovirus	VP2	HeLa	Plaque Count	50	14670593	Blast SL	refseqs
virsi2028	aggaugcaacggcuauaga	Human Rhinovirus	VP2	HeLa	Plaque Count	26	14670593	Blast SL	refseqs
virsi2031	ggacugcaaacacuaccuu	Human Rhinovirus	VP3	HeLa	Plaque Count	93	14670593	Blast SL	refseqs
virsi2032	ccagacacauacuccucag	Human Rhinovirus	VP3	HeLa	Plaque Count	71	14670593	Blast SL	refseqs
virsi2030	uccaugugcacugccuugg	Human Rhinovirus	VP3	HeLa	Plaque Count	0	14670593	Blast SL	refseqs
virsi2027	gaugcagcuuccaguggug	Human Rhinovirus	VP4	HeLa	Plaque Count	92	14670593	Blast SL	refseqs



: siRNA specific for both strands
: siRNA specific for only one strands
: siRNA Not specific
SL: siRNA seedlocator algorithm