Advances in long-read single-cell transcriptomics

Kumari, Pallawi and Kaur, Manmeet and Dindhoria, Kiran and Ashford, Bruce and Amarasinghe, Shanika L. and Thind, Amarinder Singh (2024) Advances in long-read single-cell transcriptomics. HUMAN GENETICS.

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Official URL: https://link.springer.com/article/10.1007/s00439-0...

Abstract

Long-read single-cell transcriptomics (scRNA-Seq) is revolutionizing the way we profile heterogeneity in disease. Traditional short-read scRNA-Seq methods are limited in their ability to provide complete transcript coverage, resolve isoforms, and identify novel transcripts. The scRNA-Seq protocols developed for long-read sequencing platforms overcome these limitations by enabling the characterization of full-length transcripts. Long-read scRNA-Seq techniques initially suffered from comparatively poor accuracy compared to short read scRNA-Seq. However, with improvements in accuracy, accessibility, and cost efficiency, long-reads are gaining popularity in the field of scRNA-Seq. This review details the advances in long-read scRNA-Seq, with an emphasis on library preparation protocols and downstream bioinformatics analysis tools.

Item Type: Article
Additional Information: The copyright of this article belongs to SPRINGER
Subjects: Q Science > QR Microbiology
Depositing User: Dr. K.P.S.Sengar
Date Deposited: 25 Jun 2024 03:53
Last Modified: 25 Jun 2024 03:53
URI: http://crdd.osdd.net/open/id/eprint/3136

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