Welcome to Sequence Card of Peptide


Details of CancerPDF entry with Sequence FDTASTGKTFPGF
Primary information
sequence IDSeq_2092
Peptide sequenceFDTASTGKTFPGF
CancerPDF_ID CancerPDF_ID433, CancerPDF_ID4809, CancerPDF_ID10104,
PMID19795908,24982608,21805675
Protein NameFibrinogen alpha chain,Isoform 1 of Fibrinogen alpha chain,Fibrinogen alpha chain
UniprotKB Entry NameFIBA_HUMAN,FIBA_HUMAN,FIBA_HUMAN
FluidPlasma,Urine,Urine
M/Z688.33,NA,1375.6326
Charge2,NA,NA
Mass (in Da)NA,NA,NA
fdrNA,NA,NA
Profiling TechniqueLC-MS,Nano-LC-MS,MALDI-TOF
Peptide Identification techniqueMALDI-TOF/TOF,MS/MS,MALDI-TOF-MS
Quantification TechniqueLC-MRM (multiple reaction monitoring),NA,NA
Labelled/Label FreeLabelled,Label Free,Label Free
FDRless than 7%,0.01,1
CancerPDF_ID CancerPDF_ID433, CancerPDF_ID4809, CancerPDF_ID10104,
p-ValueNA,NA,NA
SoftwareFlexAnalysis 3.0 and Biotools 3.0 software,"GPM search engine, MASCOT",NA
Length13,13,13
Cancer TypeDuctal adenocarcinoma of the pancreas (DAP),Ovarian cancer,Muscle-invasive bladder cancer
DatabaseNCBI refseq Protein Database,IPI 3.71 Human Database ,SwissProt Database
ModificationNA,NA,NA
Number of Patients"42 normal, 28patients",6 Ovarian cancer patients and 6 normal individuals,751 bladder cancer and 127 control
RegulationNA,Uniquely present in case of urine of ovarian cancer patients,Differentially expressed between cancer vs normal samples
ValidationNA,NA,Mann-Whitney tests and areas under receiver-operator characteristic
SensitivityNA,NA,NA
SpecificityNA,NA,NA
AccuracyNA,NA,NA
Peptide AtlasNA
IEDB