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Details of CancerPDF entry with Sequence NPGSSGTGGTATWKPGSSGP
Primary information
sequence IDSeq_5719
Peptide sequenceNPGSSGTGGTATWKPGSSGP
CancerPDF_ID CancerPDF_ID417, CancerPDF_ID2352,
PMID19795908,21136997
Protein NameFibrinogen alpha chain,Fibrinogen alpha
UniprotKB Entry NameFIBA_HUMAN,FIBA_HUMAN
FluidPlasma,Plasma
M/Z901.92,1801.8231
Charge2,1
Mass (in Da)NA,NA
fdrNA,NA
Profiling TechniqueLC-MS,LC-MS
Peptide Identification techniqueMALDI-TOF/TOF,LC-MS-MS/MS
Quantification TechniqueLC-MRM (multiple reaction monitoring),LC-ESI-MS
Labelled/Label FreeLabelled,Label Free
FDRless than 7%,NA
CancerPDF_ID CancerPDF_ID417, CancerPDF_ID2352,
p-ValueNA,NA
SoftwareFlexAnalysis 3.0 and Biotools 3.0 software,MASCOT(v. 2.2.01)
Length20,20
Cancer TypeDuctal adenocarcinoma of the pancreas (DAP),Normal
DatabaseNCBI refseq Protein Database,SwissProt Database
ModificationNA,NA
Number of Patients"42 normal, 28patients",27 healthy individuals
RegulationNA,NA
ValidationNA,Leave One out Cross validation
SensitivityNA,NA
SpecificityNA,NA
AccuracyNA,NA
Peptide AtlasPeptideAtlas
IEDB