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Details of CancerPDF entry with Sequence TSYNRGDSTFESKSY
Primary information
sequence IDSeq_8609
Peptide sequenceTSYNRGDSTFESKSY
CancerPDF_ID CancerPDF_ID548, CancerPDF_ID12500,
PMID19795908,26992070
Protein NameFibrinogen alpha chain,Fibrinogen alpha chain
UniprotKB Entry NameFIBA_HUMAN,FIBA_HUMAN
FluidPlasma,Serum
M/Z"871.38, 581.26",1740.7591
Charge"2, 3",NA
Mass (in Da)NA,1741.766025
fdrNA,NA
Profiling TechniqueLC-MS,LC-MS
Peptide Identification techniqueMALDI-TOF/TOF,LC-MS/MS
Quantification TechniqueLC-MRM (multiple reaction monitoring),NA
Labelled/Label FreeLabelled,Label Free
FDRless than 7%,FDR 1 %
CancerPDF_ID CancerPDF_ID548, CancerPDF_ID12500,
p-ValueNA,NA
SoftwareFlexAnalysis 3.0 and Biotools 3.0 software,SEQUEST and Maxquant
Length15,15
Cancer TypeDuctal adenocarcinoma of the pancreas (DAP),Melanoma
DatabaseNCBI refseq Protein Database,SwissProt Database
ModificationNA,NA
Number of Patients"42 normal, 28patients",8 cancer samples and 4 healthy samples
RegulationNA,"Present in 1 cancer samples out of 8 cancer samples. ,Present in 1 healthy samples out of 4 healthy samples."
ValidationNA,na
SensitivityNA,NA
SpecificityNA,NA
AccuracyNA,NA
Peptide AtlasNA
IEDB177534