Welcome to Entry Card of Peptide


Details of CancerPDF_ID CancerPDF_ID3549
Primary information
CancerPDF_IDCancerPDF_ID3549
PMID27026199
Peptide SequenceGTCSGCNCNGHAS
Peptide Sequence in PublicationGTCSGCNCNGHAS
Protein NameBasement membrane-specific heparan sulfate proteoglycan core protein
UniprotKB Entry NamePGBM_HUMAN
BiofluidUrine
M/ZNA
ChargeNA
Mass/H+NA
Mass (in Daltons)1210.37
Profiling Technique"CE-MS, Micro-TOF-MS"
Peptide Identification TechniqueMS-MS
Quantification TechniqueNA
LabelingLabel Free
FDRNA
p-Value3.10E-04
SoftwareProteome Discoverer 1.2
Length of Peptide13
Cancer TypeBladder cancer
Database for Peptide searchUniprot Human non-redundant Database
ModificationNA
Number of Patients 425 for training(109 patients with Recurrent UBC cases and 316 negative for recurrence controls) and 211 for validation (55 UBC recurrent cases and 156 recurrent controls)
Regulation/Differential ExpressionDifferentially expressed between recurrence of UBC vs recurrence control
ValidationIndependent Validation
SensitivityFor testing dataset 88%
SpecificityFor testing dataset 51%
AccuracyNA
Secondary information
Peptide AtlasNA
IEDB