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ZikaVCR

Computaional Resource
    • Dr. G. P. S. Raghava

      Group Leader
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siRNA forward strand::reverse complementary# of matches of forward strand in human genome# of matches of reverse complementary strand in human genomeDesiRm predicted efficacyimRNA SVMscore forward strandimRNA SVMscore reverse strand
AGTTGTTGATCTGTGTGAG::CTCACACAGATCAACAACT000.80564535-0.079127488-0.38405831
GTTGTTGATCTGTGTGAGT::ACTCACACAGATCAACAAC000.73793356-0.20922631-0.46295912
TTGTTGATCTGTGTGAGTC::GACTCACACAGATCAACAA001.003922-0.36759026-0.36776708
TGTTGATCTGTGTGAGTCA::TGACTCACACAGATCAACA000.85185693-0.60409198-0.39660404
GTTGATCTGTGTGAGTCAG::CTGACTCACACAGATCAAC000.75225768-0.45497683-0.22939504
TTGATCTGTGTGAGTCAGA::TCTGACTCACACAGATCAA000.90723654-0.50874078-0.3309177
TGATCTGTGTGAGTCAGAC::GTCTGACTCACACAGATCA000.91448668-0.60622022-0.50553211
GATCTGTGTGAGTCAGACT::AGTCTGACTCACACAGATC000.78653074-0.86034499-0.58064538
ATCTGTGTGAGTCAGACTG::CAGTCTGACTCACACAGAT000.94313376-0.89093229-0.59490253
TCTGTGTGAGTCAGACTGC::GCAGTCTGACTCACACAGA000.89845996-1.0432172-0.68962308
CTGTGTGAGTCAGACTGCG::CGCAGTCTGACTCACACAG000.76318012-1.2243156-0.63077367
TGTGTGAGTCAGACTGCGA::TCGCAGTCTGACTCACACA000.79080346-0.97183068-0.57034811
GTGTGAGTCAGACTGCGAC::GTCGCAGTCTGACTCACAC000.72629634-0.90455066-0.5035239
TGTGAGTCAGACTGCGACA::TGTCGCAGTCTGACTCACA000.7790178-0.84684738-0.54754133
GTGAGTCAGACTGCGACAG::CTGTCGCAGTCTGACTCAC000.6912033-0.7180732-0.47293059
TGAGTCAGACTGCGACAGT::ACTGTCGCAGTCTGACTCA000.7646932-0.75131969-0.55637603
GAGTCAGACTGCGACAGTT::AACTGTCGCAGTCTGACTC000.60370984-0.77581182-0.61337114
AGTCAGACTGCGACAGTTC::GAACTGTCGCAGTCTGACT100.78322885-0.63740055-0.58347928
GTCAGACTGCGACAGTTCG::CGAACTGTCGCAGTCTGAC000.67622418-0.56696694-0.5321262
TCAGACTGCGACAGTTCGA::TCGAACTGTCGCAGTCTGA000.74048076-0.64206967-0.62964599
CAGACTGCGACAGTTCGAG::CTCGAACTGTCGCAGTCTG000.73524891-0.51390769-0.53176366
AGACTGCGACAGTTCGAGT::ACTCGAACTGTCGCAGTCT000.72433379-0.5039743-0.49086911
GACTGCGACAGTTCGAGTC::GACTCGAACTGTCGCAGTC000.77451732-0.40770745-0.42053673
ACTGCGACAGTTCGAGTCT::AGACTCGAACTGTCGCAGT000.75320072-0.49825007-0.58429727
CTGCGACAGTTCGAGTCTG::CAGACTCGAACTGTCGCAG000.67937015-0.40264479-0.52859785
TGCGACAGTTCGAGTCTGA::TCAGACTCGAACTGTCGCA000.72140747-0.44826078-0.65592772
GCGACAGTTCGAGTCTGAA::TTCAGACTCGAACTGTCGC000.52923339-0.42511774-0.59092057
CGACAGTTCGAGTCTGAAG::CTTCAGACTCGAACTGTCG000.73763852-0.43932082-0.5794768
GACAGTTCGAGTCTGAAGC::GCTTCAGACTCGAACTGTC000.89773964-0.56795272-0.45844112
ACAGTTCGAGTCTGAAGCG::CGCTTCAGACTCGAACTGT000.82174723-0.63291982-0.41463138
CAGTTCGAGTCTGAAGCGA::TCGCTTCAGACTCGAACTG000.60578654-0.37422076-0.18077735
AGTTCGAGTCTGAAGCGAG::CTCGCTTCAGACTCGAACT000.76259441-0.34899017-0.15618368
GTTCGAGTCTGAAGCGAGA::TCTCGCTTCAGACTCGAAC000.61757403-0.4507828-0.23874242
TTCGAGTCTGAAGCGAGAG::CTCTCGCTTCAGACTCGAA000.89109187-0.41435759-0.43817798
TCGAGTCTGAAGCGAGAGC::GCTCTCGCTTCAGACTCGA000.80940357-0.47054835-0.42980461
CGAGTCTGAAGCGAGAGCT::AGCTCTCGCTTCAGACTCG000.64995568-0.55847244-0.44470005
GAGTCTGAAGCGAGAGCTA::TAGCTCTCGCTTCAGACTC000.5570336-0.53668696-0.43043427
AGTCTGAAGCGAGAGCTAA::TTAGCTCTCGCTTCAGACT000.60187018-0.50595682-0.43726484
GTCTGAAGCGAGAGCTAAC::GTTAGCTCTCGCTTCAGAC000.69726411-0.5138826-0.27783636
TCTGAAGCGAGAGCTAACA::TGTTAGCTCTCGCTTCAGA000.84525677-0.58516801-0.12239685
CTGAAGCGAGAGCTAACAA::TTGTTAGCTCTCGCTTCAG000.66198278-0.437326790.18515636
TGAAGCGAGAGCTAACAAC::GTTGTTAGCTCTCGCTTCA000.94439669-0.597570120.23239077
GAAGCGAGAGCTAACAACA::TGTTGTTAGCTCTCGCTTC000.80853958-0.783973830.013703032
AAGCGAGAGCTAACAACAG::CTGTTGTTAGCTCTCGCTT000.92533202-0.77069260.30461305
AGCGAGAGCTAACAACAGT::ACTGTTGTTAGCTCTCGCT000.8015026-0.919811320.19704952
GCGAGAGCTAACAACAGTA::TACTGTTGTTAGCTCTCGC000.76811878-1.0710455-0.10418119
CGAGAGCTAACAACAGTAT::ATACTGTTGTTAGCTCTCG000.65931661-1.0905805-0.12077621
GAGAGCTAACAACAGTATC::GATACTGTTGTTAGCTCTC000.89783264-1.0607877-0.034313894
AGAGCTAACAACAGTATCA::TGATACTGTTGTTAGCTCT000.85680851-1.09549630.085407619
GAGCTAACAACAGTATCAA::TTGATACTGTTGTTAGCTC000.70808052-0.894001450.13601643
AGCTAACAACAGTATCAAC::GTTGATACTGTTGTTAGCT000.76858712-0.825948060.090786561
GCTAACAACAGTATCAACA::TGTTGATACTGTTGTTAGC000.75247598-0.819754030.037775485
CTAACAACAGTATCAACAG::CTGTTGATACTGTTGTTAG000.89024359-0.793140960.38497875
TAACAACAGTATCAACAGG::CCTGTTGATACTGTTGTTA000.92296693-0.743032420.32186511
AACAACAGTATCAACAGGT::ACCTGTTGATACTGTTGTT000.99394071-0.652612710.2028566
ACAACAGTATCAACAGGTT::AACCTGTTGATACTGTTGT000.72226734-0.669470490.048135722
CAACAGTATCAACAGGTTT::AAACCTGTTGATACTGTTG000.69832583-0.56131568-0.089525797
AACAGTATCAACAGGTTTA::TAAACCTGTTGATACTGTT000.80492887-0.60044205-0.017618892
ACAGTATCAACAGGTTTAA::TTAAACCTGTTGATACTGT000.58356931-0.47179144-0.24248139
CAGTATCAACAGGTTTAAT::ATTAAACCTGTTGATACTG000.52420905-0.27413452-0.15614997
AGTATCAACAGGTTTAATT::AATTAAACCTGTTGATACT000.75136334-0.190552930.051802724
GTATCAACAGGTTTAATTT::AAATTAAACCTGTTGATAC000.5802929-0.176815930.22754987
TATCAACAGGTTTAATTTG::CAAATTAAACCTGTTGATA000.82581285-0.199253130.1825916
ATCAACAGGTTTAATTTGG::CCAAATTAAACCTGTTGAT000.825152-0.244946460.39196832
TCAACAGGTTTAATTTGGA::TCCAAATTAAACCTGTTGA000.71474886-0.494390050.32114822
CAACAGGTTTAATTTGGAT::ATCCAAATTAAACCTGTTG000.56361129-0.386486350.45880878
AACAGGTTTAATTTGGATT::AATCCAAATTAAACCTGTT000.70946851-0.329617820.4271427
ACAGGTTTAATTTGGATTT::AAATCCAAATTAAACCTGT000.61636862-0.252583580.1469487
CAGGTTTAATTTGGATTTG::CAAATCCAAATTAAACCTG000.53049321-0.219313340.26119453
AGGTTTAATTTGGATTTGG::CCAAATCCAAATTAAACCT000.65034645-0.193776160.42975703
GGTTTAATTTGGATTTGGA::TCCAAATCCAAATTAAACC000.4271141-0.252537070.43739665
GTTTAATTTGGATTTGGAA::TTCCAAATCCAAATTAAAC000.52336894-0.405377320.58599098
TTTAATTTGGATTTGGAAA::TTTCCAAATCCAAATTAAA000.73147647-0.452181480.68314067
TTAATTTGGATTTGGAAAC::GTTTCCAAATCCAAATTAA000.90767382-0.620052390.42964844
TAATTTGGATTTGGAAACG::CGTTTCCAAATCCAAATTA000.82630497-0.547602760.49242365
AATTTGGATTTGGAAACGA::TCGTTTCCAAATCCAAATT000.68136095-0.542715030.42114604
ATTTGGATTTGGAAACGAG::CTCGTTTCCAAATCCAAAT000.78658846-0.500059480.30510101
TTTGGATTTGGAAACGAGA::TCTCGTTTCCAAATCCAAA000.88654532-0.58309250.23355595
TTGGATTTGGAAACGAGAG::CTCTCGTTTCCAAATCCAA000.95725097-0.56236776-0.11134459
TGGATTTGGAAACGAGAGT::ACTCTCGTTTCCAAATCCA000.79581411-0.55859033-0.10836494
GGATTTGGAAACGAGAGTT::AACTCTCGTTTCCAAATCC000.57847426-0.65637077-0.11595438
GATTTGGAAACGAGAGTTT::AAACTCTCGTTTCCAAATC000.5256261-0.65677157-0.00034316364
ATTTGGAAACGAGAGTTTC::GAAACTCTCGTTTCCAAAT000.81828706-0.78943878-0.10977942
TTTGGAAACGAGAGTTTCT::AGAAACTCTCGTTTCCAAA000.86110379-0.71017179-0.11785438
TTGGAAACGAGAGTTTCTG::CAGAAACTCTCGTTTCCAA000.94158853-0.68389104-0.1966262
TGGAAACGAGAGTTTCTGG::CCAGAAACTCTCGTTTCCA000.78241005-0.41448539-0.038505699
GGAAACGAGAGTTTCTGGT::ACCAGAAACTCTCGTTTCC000.62398695-0.18994621-0.26562769
GAAACGAGAGTTTCTGGTC::GACCAGAAACTCTCGTTTC000.76876679-0.0076962199-0.41503367
AAACGAGAGTTTCTGGTCA::TGACCAGAAACTCTCGTTT000.726226410.23007282-0.2564648
AACGAGAGTTTCTGGTCAT::ATGACCAGAAACTCTCGTT000.652922550.012092187-0.32528836
ACGAGAGTTTCTGGTCATG::CATGACCAGAAACTCTCGT000.63019737-0.093621992-0.28364162
CGAGAGTTTCTGGTCATGA::TCATGACCAGAAACTCTCG000.60671853-0.042582-0.32082661
GAGAGTTTCTGGTCATGAA::TTCATGACCAGAAACTCTC000.577180460.017747643-0.22837292
AGAGTTTCTGGTCATGAAA::TTTCATGACCAGAAACTCT000.656726510.040352739-0.15638621
GAGTTTCTGGTCATGAAAA::TTTTCATGACCAGAAACTC000.525517050.16156287-0.019117226
AGTTTCTGGTCATGAAAAA::TTTTTCATGACCAGAAACT000.504890590.571043590.17853712
GTTTCTGGTCATGAAAAAC::GTTTTTCATGACCAGAAAC000.654917880.451126480.20130176
TTTCTGGTCATGAAAAACC::GGTTTTTCATGACCAGAAA000.98781060.526839110.31101921
TTCTGGTCATGAAAAACCC::GGGTTTTTCATGACCAGAA000.911958560.452867740.121715
TCTGGTCATGAAAAACCCC::GGGGTTTTTCATGACCAGA000.788752850.38503589-0.063852379
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