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ZikaVCR

Computaional Resource
    • Dr. G. P. S. Raghava

      Group Leader
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siRNA forward strand::reverse complementary# of matches of forward strand in human genome# of matches of reverse complementary strand in human genomeDesiRm predicted efficacyimRNA SVMscore forward strandimRNA SVMscore reverse strand
CTGGTCATGAAAAACCCCA::TGGGGTTTTTCATGACCAG000.667301070.11760877-0.36530196
TGGTCATGAAAAACCCCAA::TTGGGGTTTTTCATGACCA000.61610137-0.004992191-0.3941394
GGTCATGAAAAACCCCAAA::TTTGGGGTTTTTCATGACC000.340682420.085744955-0.41025975
GTCATGAAAAACCCCAAAG::CTTTGGGGTTTTTCATGAC000.627420940.036783786-0.38007829
TCATGAAAAACCCCAAAGA::TCTTTGGGGTTTTTCATGA000.586996850.12382269-0.16107811
CATGAAAAACCCCAAAGAA::TTCTTTGGGGTTTTTCATG000.342891070.16282641-0.045986424
ATGAAAAACCCCAAAGAAG::CTTCTTTGGGGTTTTTCAT100.659067250.140520030.1927415
TGAAAAACCCCAAAGAAGA::TCTTCTTTGGGGTTTTTCA000.61966720.204193740.21020396
GAAAAACCCCAAAGAAGAA::TTCTTCTTTGGGGTTTTTC000.336666950.151718460.46007071
AAAAACCCCAAAGAAGAAA::TTTCTTCTTTGGGGTTTTT000.447006710.108714060.36190574
AAAACCCCAAAGAAGAAAT::ATTTCTTCTTTGGGGTTTT000.52296869-0.313852860.19645857
AAACCCCAAAGAAGAAATC::GATTTCTTCTTTGGGGTTT000.63184249-0.141729410.18967795
AACCCCAAAGAAGAAATCC::GGATTTCTTCTTTGGGGTT000.70047449-0.211268230.12391504
ACCCCAAAGAAGAAATCCG::CGGATTTCTTCTTTGGGGT000.63843862-0.235976270.28722413
CCCCAAAGAAGAAATCCGG::CCGGATTTCTTCTTTGGGG000.53495757-0.0699953340.54479926
CCCAAAGAAGAAATCCGGA::TCCGGATTTCTTCTTTGGG000.449110810.204761760.78825491
CCAAAGAAGAAATCCGGAG::CTCCGGATTTCTTCTTTGG000.656657320.288620260.99215217
CAAAGAAGAAATCCGGAGG::CCTCCGGATTTCTTCTTTG000.722769640.126737921.0216571
AAAGAAGAAATCCGGAGGA::TCCTCCGGATTTCTTCTTT000.70901125-0.0525398050.898548
AAGAAGAAATCCGGAGGAT::ATCCTCCGGATTTCTTCTT000.6112438-0.098496490.68481308
AGAAGAAATCCGGAGGATC::GATCCTCCGGATTTCTTCT000.74873504-0.140277410.57896925
GAAGAAATCCGGAGGATCC::GGATCCTCCGGATTTCTTC000.72783591-0.0837682690.38996933
AAGAAATCCGGAGGATCCG::CGGATCCTCCGGATTTCTT000.86652017-0.148823780.33415446
AGAAATCCGGAGGATCCGG::CCGGATCCTCCGGATTTCT000.756004550.0173514130.4088443
GAAATCCGGAGGATCCGGA::TCCGGATCCTCCGGATTTC000.650335920.21703380.46044341
AAATCCGGAGGATCCGGAT::ATCCGGATCCTCCGGATTT000.730116850.264500930.36608158
AATCCGGAGGATCCGGATT::AATCCGGATCCTCCGGATT000.69446750.215701970.26253856
ATCCGGAGGATCCGGATTG::CAATCCGGATCCTCCGGAT000.750798830.19091580.26627067
TCCGGAGGATCCGGATTGT::ACAATCCGGATCCTCCGGA000.565798650.0620545110.20020565
CCGGAGGATCCGGATTGTC::GACAATCCGGATCCTCCGG000.59586881-0.022398729-0.051451719
CGGAGGATCCGGATTGTCA::TGACAATCCGGATCCTCCG000.5841251-0.26228439-0.26916655
GGAGGATCCGGATTGTCAA::TTGACAATCCGGATCCTCC000.53820023-0.3359289-0.44091373
GAGGATCCGGATTGTCAAT::ATTGACAATCCGGATCCTC000.51147346-0.14345777-0.36853787
AGGATCCGGATTGTCAATA::TATTGACAATCCGGATCCT000.68405996-0.051438041-0.47883569
GGATCCGGATTGTCAATAT::ATATTGACAATCCGGATCC000.50716822-0.00027542833-0.36654129
GATCCGGATTGTCAATATG::CATATTGACAATCCGGATC000.64433116-0.061023479-0.31993753
ATCCGGATTGTCAATATGC::GCATATTGACAATCCGGAT000.92339202-0.18425231-0.36063984
TCCGGATTGTCAATATGCT::AGCATATTGACAATCCGGA000.78716355-0.16428221-0.35637268
CCGGATTGTCAATATGCTA::TAGCATATTGACAATCCGG000.59249167-0.33270544-0.66059452
CGGATTGTCAATATGCTAA::TTAGCATATTGACAATCCG000.56486621-0.53940656-0.72557088
GGATTGTCAATATGCTAAA::TTTAGCATATTGACAATCC000.46620517-0.38098667-0.73464665
GATTGTCAATATGCTAAAA::TTTTAGCATATTGACAATC010.44258439-0.29249126-0.60130066
ATTGTCAATATGCTAAAAC::GTTTTAGCATATTGACAAT000.87889502-0.27734146-0.59150536
TTGTCAATATGCTAAAACG::CGTTTTAGCATATTGACAA000.92344432-0.022110845-0.47385528
TGTCAATATGCTAAAACGC::GCGTTTTAGCATATTGACA000.87799891-0.050638894-0.37057865
GTCAATATGCTAAAACGCG::CGCGTTTTAGCATATTGAC000.77586618-0.027634944-0.19003653
TCAATATGCTAAAACGCGG::CCGCGTTTTAGCATATTGA000.8840852-0.077579369-0.10093551
CAATATGCTAAAACGCGGA::TCCGCGTTTTAGCATATTG000.71168664-0.27914533-0.12023154
AATATGCTAAAACGCGGAG::CTCCGCGTTTTAGCATATT000.80141748-0.233560090.13258353
ATATGCTAAAACGCGGAGT::ACTCCGCGTTTTAGCATAT000.82522874-0.25652039-0.057183898
TATGCTAAAACGCGGAGTA::TACTCCGCGTTTTAGCATA000.77527044-0.12394669-0.19252011
ATGCTAAAACGCGGAGTAG::CTACTCCGCGTTTTAGCAT000.73634291-0.19017261-0.21837364
TGCTAAAACGCGGAGTAGC::GCTACTCCGCGTTTTAGCA000.85382053-0.11579485-0.19993572
GCTAAAACGCGGAGTAGCC::GGCTACTCCGCGTTTTAGC000.682663920.056642768-0.034283035
CTAAAACGCGGAGTAGCCC::GGGCTACTCCGCGTTTTAG000.787843460.069185151-0.16693888
TAAAACGCGGAGTAGCCCG::CGGGCTACTCCGCGTTTTA000.99484318-0.096987955-0.21014991
AAAACGCGGAGTAGCCCGT::ACGGGCTACTCCGCGTTTT000.77759838-0.22529882-0.32534901
AAACGCGGAGTAGCCCGTG::CACGGGCTACTCCGCGTTT000.81100466-0.21580524-0.39105575
AACGCGGAGTAGCCCGTGT::ACACGGGCTACTCCGCGTT000.69092413-0.45824471-0.49002972
ACGCGGAGTAGCCCGTGTA::TACACGGGCTACTCCGCGT000.62656997-0.34457387-0.56663334
CGCGGAGTAGCCCGTGTAA::TTACACGGGCTACTCCGCG000.380938-0.47040061-0.69941767
GCGGAGTAGCCCGTGTAAA::TTTACACGGGCTACTCCGC000.44136879-0.40549327-0.79578449
CGGAGTAGCCCGTGTAAAC::GTTTACACGGGCTACTCCG000.65541729-0.37830968-0.88297068
GGAGTAGCCCGTGTAAACC::GGTTTACACGGGCTACTCC000.73201204-0.49806235-0.90632507
GAGTAGCCCGTGTAAACCC::GGGTTTACACGGGCTACTC000.7915641-0.49110233-1.020772
AGTAGCCCGTGTAAACCCC::GGGGTTTACACGGGCTACT000.73713886-0.6201342-1.0695671
GTAGCCCGTGTAAACCCCT::AGGGGTTTACACGGGCTAC000.68792381-0.44155565-1.1382733
TAGCCCGTGTAAACCCCTT::AAGGGGTTTACACGGGCTA000.7647004-0.54950728-1.2471314
AGCCCGTGTAAACCCCTTG::CAAGGGGTTTACACGGGCT000.77654699-0.63218733-1.3256812
GCCCGTGTAAACCCCTTGG::CCAAGGGGTTTACACGGGC000.59329116-0.66753312-1.108509
CCCGTGTAAACCCCTTGGG::CCCAAGGGGTTTACACGGG000.60853189-0.80373524-1.0428311
CCGTGTAAACCCCTTGGGA::TCCCAAGGGGTTTACACGG000.52358229-0.85745679-1.0137063
CGTGTAAACCCCTTGGGAG::CTCCCAAGGGGTTTACACG000.57290915-0.81766864-0.96732637
GTGTAAACCCCTTGGGAGG::CCTCCCAAGGGGTTTACAC000.61538632-0.73611975-0.97542317
TGTAAACCCCTTGGGAGGT::ACCTCCCAAGGGGTTTACA000.63946722-0.93832682-0.96972696
GTAAACCCCTTGGGAGGTT::AACCTCCCAAGGGGTTTAC000.45967592-0.82476119-0.93613505
TAAACCCCTTGGGAGGTTT::AAACCTCCCAAGGGGTTTA000.6746018-0.79179032-0.88107598
AAACCCCTTGGGAGGTTTG::CAAACCTCCCAAGGGGTTT000.65187883-0.75076586-0.74122287
AACCCCTTGGGAGGTTTGA::TCAAACCTCCCAAGGGGTT000.59945297-0.75288612-0.71929933
ACCCCTTGGGAGGTTTGAA::TTCAAACCTCCCAAGGGGT000.49983933-0.60449966-0.48174852
CCCCTTGGGAGGTTTGAAG::CTTCAAACCTCCCAAGGGG000.53662379-0.40351025-0.24976786
CCCTTGGGAGGTTTGAAGA::TCTTCAAACCTCCCAAGGG000.47828754-0.36680892-0.0084400491
CCTTGGGAGGTTTGAAGAG::CTCTTCAAACCTCCCAAGG000.52729499-0.316025730.26956027
CTTGGGAGGTTTGAAGAGG::CCTCTTCAAACCTCCCAAG000.71191909-0.476778350.27421121
TTGGGAGGTTTGAAGAGGT::ACCTCTTCAAACCTCCCAA000.80473478-0.405809290.21222404
TGGGAGGTTTGAAGAGGTT::AACCTCTTCAAACCTCCCA000.62244888-0.216713970.26504773
GGGAGGTTTGAAGAGGTTG::CAACCTCTTCAAACCTCCC000.62339486-0.178576290.31226889
GGAGGTTTGAAGAGGTTGC::GCAACCTCTTCAAACCTCC000.62816782-0.160240450.3402729
GAGGTTTGAAGAGGTTGCC::GGCAACCTCTTCAAACCTC000.66687919-0.191683310.36776451
AGGTTTGAAGAGGTTGCCA::TGGCAACCTCTTCAAACCT000.63390964-0.296632610.28744605
GGTTTGAAGAGGTTGCCAG::CTGGCAACCTCTTCAAACC000.58589989-0.423513230.25749515
GTTTGAAGAGGTTGCCAGC::GCTGGCAACCTCTTCAAAC000.66808963-0.553282390.28589508
TTTGAAGAGGTTGCCAGCC::GGCTGGCAACCTCTTCAAA000.88259537-0.554204920.26004628
TTGAAGAGGTTGCCAGCCG::CGGCTGGCAACCTCTTCAA000.90398389-0.532680790.14579655
TGAAGAGGTTGCCAGCCGG::CCGGCTGGCAACCTCTTCA000.81019089-0.590644860.10286719
GAAGAGGTTGCCAGCCGGA::TCCGGCTGGCAACCTCTTC000.59046727-0.525347740.05752269
AAGAGGTTGCCAGCCGGAC::GTCCGGCTGGCAACCTCTT000.78445634-0.54363878-0.052518919
AGAGGTTGCCAGCCGGACT::AGTCCGGCTGGCAACCTCT000.69848847-0.5295305-0.25383604
GAGGTTGCCAGCCGGACTT::AAGTCCGGCTGGCAACCTC000.59586906-0.47176573-0.17115356
AGGTTGCCAGCCGGACTTC::GAAGTCCGGCTGGCAACCT000.58176819-0.30964321-0.064507946
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