Zika Virus Computational Resources

siRNA forward strand::reverse complementary	# of matches of forward strand in human genome	# of matches of reverse complementary strand in human genome	DesiRm predicted efficacy	imRNA SVMscore forward strand	imRNA SVMscore reverse strand
AGACCAGCTGAAGGAGGAA::TTCCTCCTTCAGCTGGTCT	0	0	0.58119181	-0.15024793	0.031567013
GACCAGCTGAAGGAGGAAA::TTTCCTCCTTCAGCTGGTC	0	0	0.50321098	-0.21560137	0.099492157
ACCAGCTGAAGGAGGAAAA::TTTTCCTCCTTCAGCTGGT	0	0	0.55248156	-0.13077988	0.20670375
CCAGCTGAAGGAGGAAAAA::TTTTTCCTCCTTCAGCTGG	0	0	0.42572033	0.37597698	0.37043358
CAGCTGAAGGAGGAAAAAC::GTTTTTCCTCCTTCAGCTG	0	0	0.68371483	0.31038127	0.4143704
AGCTGAAGGAGGAAAAACA::TGTTTTTCCTCCTTCAGCT	0	0	0.69137582	0.24301367	0.78569162
GCTGAAGGAGGAAAAACAG::CTGTTTTTCCTCCTTCAGC	0	0	0.62948184	0.21621033	1.0568155
CTGAAGGAGGAAAAACAGT::ACTGTTTTTCCTCCTTCAG	0	1	0.72052672	-0.12926365	0.88790563
TGAAGGAGGAAAAACAGTT::AACTGTTTTTCCTCCTTCA	0	1	0.86795325	-0.31754166	0.79344644
GAAGGAGGAAAAACAGTTA::TAACTGTTTTTCCTCCTTC	0	1	0.64822214	-0.41832096	0.63493869
AAGGAGGAAAAACAGTTAT::ATAACTGTTTTTCCTCCTT	0	0	0.71504241	-0.43837923	0.61288797
AGGAGGAAAAACAGTTATG::CATAACTGTTTTTCCTCCT	0	0	0.78627442	-0.57810943	0.3872727
GGAGGAAAAACAGTTATGG::CCATAACTGTTTTTCCTCC	0	0	0.7201444	-0.55363631	0.4366294
GAGGAAAAACAGTTATGGA::TCCATAACTGTTTTTCCTC	0	0	0.6068839	-0.50124585	0.65869987
AGGAAAAACAGTTATGGAC::GTCCATAACTGTTTTTCCT	0	0	0.8086802	-0.41705466	0.71350323
GGAAAAACAGTTATGGACA::TGTCCATAACTGTTTTTCC	0	0	0.63383079	-0.2138109	0.94926154
GAAAAACAGTTATGGACAT::ATGTCCATAACTGTTTTTC	0	0	0.56740746	0.053330469	0.93403296
AAAAACAGTTATGGACATC::GATGTCCATAACTGTTTTT	0	0	0.83413572	-0.0084436898	0.71342897
AAAACAGTTATGGACATCA::TGATGTCCATAACTGTTTT	0	0	0.87554082	-0.36857715	0.44214036
AAACAGTTATGGACATCAT::ATGATGTCCATAACTGTTT	0	0	0.76312878	-0.22610431	0.44238567
AACAGTTATGGACATCATT::AATGATGTCCATAACTGTT	0	0	0.81948422	-0.068766252	0.26518382
ACAGTTATGGACATCATTT::AAATGATGTCCATAACTGT	0	0	0.7916777	0.082175677	0.0037140639
CAGTTATGGACATCATTTC::GAAATGATGTCCATAACTG	0	0	0.74627498	0.30936821	0.025458491
AGTTATGGACATCATTTCA::TGAAATGATGTCCATAACT	0	0	0.65742157	0.32400994	0.16563647
GTTATGGACATCATTTCAA::TTGAAATGATGTCCATAAC	0	0	0.58547116	0.38392803	0.32532066
TTATGGACATCATTTCAAG::CTTGAAATGATGTCCATAA	0	0	0.83960697	0.34862246	0.31003854
TATGGACATCATTTCAAGA::TCTTGAAATGATGTCCATA	0	0	0.73535859	0.28434533	0.4198334
ATGGACATCATTTCAAGAC::GTCTTGAAATGATGTCCAT	0	0	0.8342725	0.37398613	0.39684494
TGGACATCATTTCAAGACA::TGTCTTGAAATGATGTCCA	0	0	0.681547	0.52528432	0.18028486
GGACATCATTTCAAGACAA::TTGTCTTGAAATGATGTCC	0	0	0.41029375	0.49374065	0.25222854
GACATCATTTCAAGACAAG::CTTGTCTTGAAATGATGTC	0	0	0.52582586	0.44316477	0.17839931
ACATCATTTCAAGACAAGA::TCTTGTCTTGAAATGATGT	0	0	0.56346685	0.27325527	0.15184366
CATCATTTCAAGACAAGAC::GTCTTGTCTTGAAATGATG	0	0	0.66101939	0.33871263	0.19950821
ATCATTTCAAGACAAGACC::GGTCTTGTCTTGAAATGAT	0	0	0.84210264	0.28332621	0.29027385
TCATTTCAAGACAAGACCA::TGGTCTTGTCTTGAAATGA	0	0	0.68287307	0.26737303	0.34956349
CATTTCAAGACAAGACCAG::CTGGTCTTGTCTTGAAATG	0	0	0.58044261	0.040331622	0.33079918
ATTTCAAGACAAGACCAGA::TCTGGTCTTGTCTTGAAAT	1	0	0.61631235	0.10922416	0.42279393
TTTCAAGACAAGACCAGAG::CTCTGGTCTTGTCTTGAAA	0	0	0.83900994	-0.059940445	0.6375226
TTCAAGACAAGACCAGAGA::TCTCTGGTCTTGTCTTGAA	0	0	0.74021483	0.1445426	0.6432675
TCAAGACAAGACCAGAGAG::CTCTCTGGTCTTGTCTTGA	0	0	0.71509374	0.12214099	0.35912007
CAAGACAAGACCAGAGAGG::CCTCTCTGGTCTTGTCTTG	0	0	0.71417505	-0.011678776	0.40594884
AAGACAAGACCAGAGAGGG::CCCTCTCTGGTCTTGTCTT	0	1	0.82793883	-0.12652519	0.27454508
AGACAAGACCAGAGAGGGA::TCCCTCTCTGGTCTTGTCT	0	0	0.62865944	-0.35948812	0.11532794
GACAAGACCAGAGAGGGAG::CTCCCTCTCTGGTCTTGTC	0	0	0.75366595	-0.65575928	0.11857655
ACAAGACCAGAGAGGGAGT::ACTCCCTCTCTGGTCTTGT	0	0	0.65774094	-0.63523053	-0.0048576636
CAAGACCAGAGAGGGAGTG::CACTCCCTCTCTGGTCTTG	0	0	0.66251784	-0.77358307	-0.025929728
AAGACCAGAGAGGGAGTGG::CCACTCCCTCTCTGGTCTT	0	0	0.77099084	-0.83833046	-0.14011166
AGACCAGAGAGGGAGTGGA::TCCACTCCCTCTCTGGTCT	0	0	0.63920683	-0.90195195	-0.2015699
GACCAGAGAGGGAGTGGAC::GTCCACTCCCTCTCTGGTC	0	0	0.63116551	-0.86088086	-0.27415053
ACCAGAGAGGGAGTGGACA::TGTCCACTCCCTCTCTGGT	0	0	0.66891431	-0.71855289	-0.26818398
CCAGAGAGGGAGTGGACAA::TTGTCCACTCCCTCTCTGG	0	0	0.55572108	-0.63198702	-0.30454493
CAGAGAGGGAGTGGACAAG::CTTGTCCACTCCCTCTCTG	0	0	0.69692769	-0.69339673	-0.4542673
AGAGAGGGAGTGGACAAGT::ACTTGTCCACTCCCTCTCT	0	0	0.76195695	-0.45065867	-0.80323545
GAGAGGGAGTGGACAAGTT::AACTTGTCCACTCCCTCTC	0	0	0.62470503	-0.38540633	-0.77406829
AGAGGGAGTGGACAAGTTG::CAACTTGTCCACTCCCTCT	0	0	0.77677964	-0.38291495	-0.54018413
GAGGGAGTGGACAAGTTGT::ACAACTTGTCCACTCCCTC	0	0	0.72608294	-0.1631139	-0.57032481
AGGGAGTGGACAAGTTGTC::GACAACTTGTCCACTCCCT	0	0	0.8134101	-0.0018982055	-0.56421725
GGGAGTGGACAAGTTGTCA::TGACAACTTGTCCACTCCC	0	0	0.63488766	0.12461924	-0.50578021
GGAGTGGACAAGTTGTCAC::GTGACAACTTGTCCACTCC	0	0	0.74756506	0.19798147	-0.42505314
GAGTGGACAAGTTGTCACT::AGTGACAACTTGTCCACTC	0	0	0.74051827	0.21575503	-0.33268765
AGTGGACAAGTTGTCACTT::AAGTGACAACTTGTCCACT	0	0	0.75310842	0.20705646	-0.32530056
GTGGACAAGTTGTCACTTA::TAAGTGACAACTTGTCCAC	0	0	0.69310721	0.31675097	-0.38550682
TGGACAAGTTGTCACTTAT::ATAAGTGACAACTTGTCCA	0	0	0.81745729	0.40681425	-0.38156733
GGACAAGTTGTCACTTATG::CATAAGTGACAACTTGTCC	0	0	0.73929058	0.43358794	-0.42312769
GACAAGTTGTCACTTATGC::GCATAAGTGACAACTTGTC	0	0	0.83363492	0.24586246	-0.5662892
ACAAGTTGTCACTTATGCT::AGCATAAGTGACAACTTGT	0	0	0.90546346	0.26788522	-0.62179733
CAAGTTGTCACTTATGCTC::GAGCATAAGTGACAACTTG	0	0	0.90563651	0.15134298	-0.61588838
AAGTTGTCACTTATGCTCT::AGAGCATAAGTGACAACTT	0	0	0.90167494	0.019038574	-0.51319244
AGTTGTCACTTATGCTCTC::GAGAGCATAAGTGACAACT	0	0	0.7993598	-0.34705991	-0.56562488
GTTGTCACTTATGCTCTCA::TGAGAGCATAAGTGACAAC	0	0	0.72145607	-0.38736824	-0.61080919
TTGTCACTTATGCTCTCAA::TTGAGAGCATAAGTGACAA	0	0	0.79853062	-0.46247464	-0.63227169
TGTCACTTATGCTCTCAAC::GTTGAGAGCATAAGTGACA	0	0	0.85282431	-0.5419553	-0.67735347
GTCACTTATGCTCTCAACA::TGTTGAGAGCATAAGTGAC	0	0	0.78040773	-0.61264865	-0.69341202
TCACTTATGCTCTCAACAC::GTGTTGAGAGCATAAGTGA	0	0	0.94084273	-0.56017855	-0.90112516
CACTTATGCTCTCAACACA::TGTGTTGAGAGCATAAGTG	0	0	0.72243022	-0.51608209	-0.86743058
ACTTATGCTCTCAACACAT::ATGTGTTGAGAGCATAAGT	0	0	0.79723583	-0.50195622	-0.88749008
CTTATGCTCTCAACACATT::AATGTGTTGAGAGCATAAG	0	0	0.73526254	-0.54813045	-0.80273345
TTATGCTCTCAACACATTC::GAATGTGTTGAGAGCATAA	0	0	1.075446	-0.51896783	-0.65563011
TATGCTCTCAACACATTCA::TGAATGTGTTGAGAGCATA	0	0	0.88484085	-0.47710512	-0.704916
ATGCTCTCAACACATTCAC::GTGAATGTGTTGAGAGCAT	0	0	0.86519389	-0.46417535	-0.63227727
TGCTCTCAACACATTCACC::GGTGAATGTGTTGAGAGCA	0	0	0.86350024	-0.43020809	-0.64939571
GCTCTCAACACATTCACCA::TGGTGAATGTGTTGAGAGC	0	0	0.63873127	-0.46560526	-0.73662931
CTCTCAACACATTCACCAA::TTGGTGAATGTGTTGAGAG	0	0	0.53019037	-0.40360042	-0.60451791
TCTCAACACATTCACCAAC::GTTGGTGAATGTGTTGAGA	0	0	0.75516117	-0.23213902	-0.68048948
CTCAACACATTCACCAACT::AGTTGGTGAATGTGTTGAG	0	0	0.74371296	-0.17252078	-0.64510989
TCAACACATTCACCAACTT::AAGTTGGTGAATGTGTTGA	0	0	0.70523878	-0.069844354	-0.34386775
CAACACATTCACCAACTTG::CAAGTTGGTGAATGTGTTG	0	0	0.77994131	-0.20897426	-0.12415978
AACACATTCACCAACTTGG::CCAAGTTGGTGAATGTGTT	0	0	0.89030487	-0.20196536	0.074852565
ACACATTCACCAACTTGGT::ACCAAGTTGGTGAATGTGT	0	0	0.75945166	-0.16883142	0.27983745
CACATTCACCAACTTGGTG::CACCAAGTTGGTGAATGTG	0	0	0.750554	-0.29699573	0.12087467
ACATTCACCAACTTGGTGG::CCACCAAGTTGGTGAATGT	0	0	0.88207997	-0.38081847	0.21336565
CATTCACCAACTTGGTGGT::ACCACCAAGTTGGTGAATG	0	0	0.59555512	-0.40350861	0.17313088
ATTCACCAACTTGGTGGTG::CACCACCAAGTTGGTGAAT	0	0	0.72299221	-0.51286631	0.052114947
TTCACCAACTTGGTGGTGC::GCACCACCAAGTTGGTGAA	0	0	0.94438669	-0.53149633	0.054514854
TCACCAACTTGGTGGTGCA::TGCACCACCAAGTTGGTGA	0	0	0.7309344	-0.5994278	-3.7017135e-05
CACCAACTTGGTGGTGCAG::CTGCACCACCAAGTTGGTG	0	0	0.58105971	-0.71145057	0.032268866
ACCAACTTGGTGGTGCAGC::GCTGCACCACCAAGTTGGT	0	0	0.81175957	-0.72975925	-0.031209817
CCAACTTGGTGGTGCAGCT::AGCTGCACCACCAAGTTGG	0	0	0.70236005	-0.74008848	-0.15552709
CAACTTGGTGGTGCAGCTT::AAGCTGCACCACCAAGTTG	0	0	0.69986117	-0.56485281	-0.013436717
AACTTGGTGGTGCAGCTTA::TAAGCTGCACCACCAAGTT	0	0	0.70941905	-0.60371832	-0.0085869276

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ZikaVCR