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Bajaj, Manish and Muddassir, Mohd and Choi, Bumjoon and Singh, Priyanka and Park, Jong Bum and Singh, Surjeet and Yadav, Manisha and Kumar, Rajesh and Eom, Kilho and Sharma, Deepak (2023) Single-molecule analysis of osmolyte-mediated nanomechanical unfolding behavior of a protein domain. International journal of biological macromolecules, 253. ISSN 1879-0003
Pande, Akshara and Patiyal, Sumeet and Lathwal, Anjali and Arora, Chakit and Kaur, Dilraj and Dhall, Anjali and Mishra, Gaurav and Kaur, Harpreet and Sharma, Neelam and Jain, Shipra and Usmani, Salman Sadullah and Agrawal, Piyush and Kumar, Rajesh and Kumar, Vinod and Prasad, G S (2023) Pfeature: A Tool for Computing Wide Range of Protein Features and Building Prediction Models. Journal of Computational Biology , 30 (2). pp. 204-222.
Kalra, Rashi and Tiwari, Drishti and Dkhar, H Kitdorlang and Bhagyaraj, Ella and Kumar, Rajesh and Bhardwaj, Anshu and Gupta, Pawan (2023) Host factors subverted by Mycobacterium tuberculosis: Potential targets for host directed therapy. International reviews of immunology, 42 (1). pp. 43-70.
Garg, Mansi and Sharma, Deepak and Kumar, Rajesh (2022) Analysis of the effect of 1-Allyl-3-Methylimidazolium chloride on thermodynamic stability, folding kinetics, and motional dynamics of horse cytochrome c. BIOPHYSICAL CHEMISTRY, 290.
Pande, Akshara and Patiyal, Sumeet and Lathwal, Anjali and Arora, Chakit and Kaur, Dilraj and Dhall, Anjali and Mishra, Gaurav and Kaur, Harpreet and Sharma, Neelam and Jain, Shipra and Usmani, Salman Sadullah and Agrawal, Piyush and Kumar, Rajesh and Kumar, Vinod and Raghava, Gajendra P. S. (2022) Pfeature: A Tool for Computing Wide Range of Protein Features and Building Prediction Models. JOURNAL OF COMPUTATIONAL BIOLOGY.
Kumar, Rajesh and Sharma, Deepak and Kumar, Navinder and Kumari, Beeta and Shabnam, . and Kumar, Sanjeev and Kumar, Rajesh (2022) Substitution of carbonate by non-physiological synergistic anion modulates the stability and iron release kinetics of serum transferrin. Biochimica et biophysica acta, 1871 (1). ISSN 0006-3002
Kumar, Vinod and Patiyal, Sumeet and Kumar, Rajesh and Sahai, Sukriti and Kaur, Dilraj and Lathwal, Anjali and Raghava, Gajendra P. S. (2021) B3Pdb: an archive of blood-brain barrier-penetrating peptides. BRAIN STRUCTURE & FUNCTION, 226 (8). pp. 2489-2495.
Puri, Anuradhika and Singh, Priyanka and Kumar, Navinder and Kumar, Rajesh and Sharma, Deepak (2021) Tah1, A Key Component of R2TP Complex that Regulates Assembly of snoRNP, is Involved in De Novo Generation and Maintenance of Yeast Prion [URE3]. Journal of molecular biology, 433. ISSN 0022-2836
Kumar, Rajesh and Deshpande, Suprit and Sewall, Leigh M and Ozorowski, Gabriel and Cottrell, Christopher and Lee, Wwn-Hsin and Holden, Lauren G and Richey , Sara T and Chandrawacar, Antra Singh and Dhiman, Kanika and Ashish, Fnu and Kumar, Vivek and Ahmed, S and Hingankar, Nitin and Kumar, Naresh and Murugavel, Kailapuri G. and Srikrishnan, AK and Sok, Devin and Ward, Andrew B and Bhattacharya, Jayanta (2021) Elicitation of potent serum neutralizing antibody responses in rabbits by immunization with an HIV-1 clade C trimeric Env derived from an Indian elite neutralizer. PLoS Pathogens, 17. ISSN 1553-7374
Lathwal, Anjali and Kumar, Rajesh and Raghava, G.P.S. (2021) In-silico identification of subunit vaccine candidates against lung cancer-associated oncogenic viruses. Computers in Biology and Medicine, 130.
Lathwal, Anjali and Kumar, Rajesh and Raghava, G.P.S. (2020) OvirusTdb: A database of oncolytic viruses for the advancement of therapeutics in cancer. Virology, 548. pp. 109-116.
Kumar, Rajesh and Lathwal, Anjali and Kumar, Vinod and Patiyal, Sumeet and Raghav, Pawan Kumar and Raghava, Gajendra P. S. (2020) CancerEnD: A database of cancer associated enhancers. GENOMICS, 112 (5). pp. 3696-3702.
Lathwal, Anjali and Kumar, Rajesh and Arora, Chakit and Raghava, G.P.S. (2020) Identification of prognostic biomarkers for major subtypes of non-small-cell lung cancer using genomic and clinical data. JOURNAL OF CANCER RESEARCH AND CLINICAL ONCOLOGY. (In Press)
Lathwal, Anjali and Kumar, Rajesh and Raghava, G.P.S. (2020) Computer-aided designing of oncolytic viruses for overcoming translational challenges of cancer immunotherapy. Drug discovery today. ISSN 1878-5832 (In Press)
Kaur, Harpreet and Dhall, Anjali and Kumar, Rajesh and Raghava, G.P.S. (2020) Identification of Platform-Independent Diagnostic Biomarker Panel for Hepatocellular Carcinoma Using Large-Scale Transcriptomics Data. Frontiers in genetics, 10. p. 1306. ISSN 1664-8021
Patiyal, Sumeet and Agrawal, Piyush and Kumar, Vinod and Dhall, Anjali and Kumar, Rajesh and Mishra, Gaurav and Raghava, G.P.S. (2020) NAGbinder: An approach for identifying N-acetylglucosamine interacting residues of a protein from its primary sequence. Protein science : a publication of the Protein Society, 29 (1). pp. 201-210. ISSN 1469-896X
Kumar, Vinod and Kumar, Rajesh and Agrawal, Piyush and Patiyal, Sumeet and Raghava, G.P.S. (2020) A Method for Predicting Hemolytic Potency of Chemically Modified Peptides From Its Structure. Frontiers in pharmacology, 11. ISSN 1663-9812
Raghav, Pawan Kumar and Kumar, Rajesh and Kumar, Vinod and Raghava, Gajendra P S (2019) Docking-based approach for identification of mutations that disrupt binding between Bcl-2 and Bax proteins: Inducing apoptosis in cancer cells. Molecular genetics & genomic medicine, 7 (11). e910. ISSN 2324-9269
Singh, Pargat and Bharti, . and Kumar, Rajesh and Bhalla, Vijayender (2019) Gold nanoparticle triggered siloxane formation for polymerization based amplification in enzyme free visual immunoassay. Analytica chimica acta, 1078. pp. 151-160. ISSN 1873-4324
Patiyal, Sumeet and Agrawal, Piyush and Kumar, Vinod and Dhall, Anjali and Kumar, Rajesh and Mishra, Gaurav and Raghava, Gajendra P S (2019) NAGbinder: An approach for identifying N-acetylglucosamine interacting residues of a protein from its primary sequence. Protein science : a publication of the Protein Society. ISSN 1469-896X
Kumar, Rajesh and Patiyal, Sumeet and Kumar, Vinod and Nagpal, Gandharva and Raghava, G.P.S. (2019) In Silico Analysis of Gene Expression Change Associated with Copy Number of Enhancers in Pancreatic Adenocarcinoma. International journal of molecular sciences, 20 (14). ISSN 1422-0067
Singh, Pargat and Kakkar, Saloni and Bharti, . and Kumar, Rajesh and Bhalla, Vijayender (2019) Rapid and sensitive colorimetric detection of pathogens based on silver-urease interactions. Chemical communications (Cambridge, England), 55 (33). pp. 4765-4768. ISSN 1364-548X
Kumar, Rajesh and Nagpal, Gandharva and Kumar, Vinod and Usmani, Salman Sadullah and Agrawal, Piyush and Raghava, G.P.S. (2019) HumCFS: a database of fragile sites in human chromosomes. BMC genomics, 19 (Supp 9). pp. 1-8. ISSN 1471-2164
Jain, Rishu and Sharma, Deepak and Kumar, Rakesh and Kumar, Rajesh (2019) Structural, kinetic and thermodynamic characterizations of SDS-induced molten globule state of a highly negatively charged cytochrome c. Journal of biochemistry, 165 (2). pp. 125-137. ISSN 1756-2651
Kumar, Rajesh and Kumar, Rajesh and Sharma, Deepak and Garg, Mansi and Kumar, Vinay and Agarwal, Mukesh Chand (2018) Macromolecular crowding-induced molten globule states of the alkali pH-denatured proteins. Biochimica et biophysica acta. Proteins and proteomics, 1866 (11). pp. 1102-1114. ISSN 1878-1454
Kumar, Rajesh and Sharma, Deepak and Kumar, Vinay and Kumar, Rajesh (2018) Factors defining the effects of macromolecular crowding on dynamics and thermodynamic stability of heme proteins in-vitro. Archives of biochemistry and biophysics, 654. pp. 146-162. ISSN 1096-0384
Muddassir, Mohd and Manna, Bharat and Singh, Priyanka and Singh, Surjeet and Kumar, Rajesh and Ghosh, Amit and Sharma, Deepak (2018) Single-molecule force-unfolding of titin I27 reveals a correlation between the size of the surrounding anions and its mechanical stability. Chemical communications (Cambridge, England), 54 (69). pp. 9635-9638. ISSN 1364-548X
Jain, Rishu and Agarwal, Mukesh Chand and Kumar, Rakesh and Sharma, Deepak and Kumar, Rajesh (2018) Effects of lyotropic anions on thermodynamic stability and dynamics of horse cytochrome c. Biophysical chemistry, 240. pp. 88-97. ISSN 1873-4200
Singh, Pargat and Gupta, Ritika and Choudhury, Megha and Pinnaka, Anil Kumar and Kumar, Rajesh and Bhalla, Vijayender (2018) Drug and nanoparticle-mediated rapid naked eye water test for pathogens detection. Sensors and Actuators B: Chemical, 262 (1). pp. 603-610.
Kumar, Vinod and Agrawal, Piyush and Kumar, Rajesh and Bhalla, Sherry and Usmani, Salman Sadullah and Varshney, Grish C and Raghava, Gajendra P S (2018) Prediction of Cell-Penetrating Potential of Modified Peptides Containing Natural and Chemically Modified Residues. Frontiers in microbiology, 9. p. 725. ISSN 1664-302X
Agrawal, Piyush and Bhalla, Sherry and Chaudhary, Kumardeep and Kumar, Rajesh and Sharma, Meenu and Raghava, G.P.S. (2018) In silco Approach for Prediction of Antifungal Peptides. Frontiers in microbiology, 9. p. 323. ISSN 1664-302X
Usmani, Salman Sadullah and Kumar, Rajesh and Kumar, Vinod and Singh, Sandeep and Raghava, G.P.S. (2018) AntiTbPdb: a knowledgebase of anti-tubercular peptides. Database : the journal of biological databases and curation, 2018. ISSN 1758-0463
Usmani, Salman Sadullah and Kumar, Rajesh and Bhalla, Sherry and Kumar, Vinod and Raghava, G.P.S. (2018) In Silico Tools and Databases for Designing Peptide-Based Vaccine and Drugs. Advances in protein chemistry and structural biology, 112. pp. 221-263. ISSN 1876-1631
Bhalla, Sherry and Verma, Ruchi and Kaur, Harpreet and Kumar, Rajesh and Usmani, Salman Sadullah and Sharma, Suresh and Raghava, G.P.S. (2017) CancerPDF: A repository of cancer-associated peptidome found in human biofluids. Scientific Reports, 7 (1). ISSN 2045-2322
Kumar, Shailesh and Sharma, Deepak and Kumar, Rajesh (2017) Role of Macromolecular Crowding on Stability and Iron Release Kinetics of Serum Transferrin. The Journal of Physical Chemistry B, 121 (37). pp. 8669-8683. ISSN 1520-6106
Mathur, Deepika and Prakash, Satya and Anand, Priya and Kaur, Harpreet and Agrawal, Piyush and Mehta, Ayesha and Kumar, Rajesh and Singh, Sandeep and Raghava, G.P.S. (2016) PEPlife: A Repository of the Half-life of Peptides. Scientific Reports, 6 (1). ISSN 2045-2322
Jain, Rishu and Sharma, Deepak and Kumar, Sandeep and Kumar, Rajesh (2014) Factor defining the effects of glycine betaine on the thermodynamic stability and internal dynamics of horse cytochrome C. Biochemistry, 53 (32). pp. 5221-35. ISSN 1520-4995
Kumar, Sandeep and Sharma, Deepak and Kumar, Rajesh and Kumar, Rajesh (2014) Electrostatic effects control the stability and iron release kinetics of ovotransferrin. Journal of biological inorganic chemistry, 19 (6). pp. 1009-24. ISSN 1432-1327
Kumar, Sandeep and Sharma, Deepak and Kumar, Rajesh (2014) Effect of urea and alkylureas on the stability and structural fluctuation of the M80-containing Ω-loop of horse cytochrome c. Biochimica et biophysica acta, 1844 (3). pp. 641-55. ISSN 0006-3002
Jain, Rishu and Sharma, Deepak and Kumar, Rajesh (2013) Effects of alcohols on the stability and low-frequency local motions that control the slow changes in structural dynamics of ferrocytochrome c. Journal of biochemistry, 154 (4). pp. 341-54. ISSN 1756-2651
Kumar, Rajesh (2008) Development of immunobiosensor for prsticide detection. PhD thesis, CSIR-IMTECH, Chandigarh/ Jawaharlal Nehru University, New Delhi: India..
