CancerDR: Cancer Drug Resistance Database

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Clustering of Cell lines



This page allows user to cluster cell lines based on their sensitivity towards a drug. We group cell lines for each drug based on their relative sensitivity to reference (highest sensitivity) or inhibition IC50 value in a given range. User can either choose tissue type or all cell lines or can select the cell lines with mutated drug targets. The second column gives the number of cell lines screened against the drug as it is equal to or greater than reference IC50 (lowest of all). Subsequent columns, up to eight, give grouping based on IC50 value equal to or greater than 3, 5, 25, 100 and 250 times of reference IC50. The columns from nine to sixteen shows the group of cell lines having absolute value of IC50 lying in different ranges (R1, R2, R3, R4, R5, R6, R7 and R8). The cell line in groups with lower value are those which are very sensitive to that drug while groups with high IC50 values comprise cell lines having high resistance and are important for study of resistance-mechanism. For more information, please click HERE


** Ref: Lowest of all IC50s, xRef: times of reference value (column two to seven) , Range of IC50 value (column eight to fifteen)- R1: 0-0.001 µM, R2: 0.001-0.005µM, R3: 0.005-0.025µM, R4: 0.025-0.125µM, R5: 0.125-0.625µM, R6: 0.625-15µM, R7: 15-390µM, R8: greater than 390 µM.



Select Tissue type against which you want to see Cell Line clusters

AUTONOMIC GANGLIA BILIARY TRACT BLADDER BLOOD BONE BREAST CENTRAL NERVOUS SYSTEM
ENDOMETRIUM GI TRACT HAEMATOPOIETIC AND LYMPHOID TISSUE KIDNEY LARGE INTESTINE LIVER LUNG
OESOPHAGUS OTHER OVARY PANCREASE PLEURA PROSTATE SALIVARY GLAND
SKIN SOFT TISSUE STOMACH THYROID UPPER AERODIGESTIVE TRACT URINARY TRACT UTERUS
ALL MUTANTS

Cell Line clusters for AUTONOMIC GANGLIA tissue type

Drug IC50 ≥ Ref IC50 ≥ 3xRef IC50 ≥ 5xRef IC50 ≥ 25xRef IC50 ≥ 50xRef IC50 ≥ 100xRef IC50 ≥ 250xRef R1 R2 R3 R4 R5 R6 R7 R8