Peptide Related Links at CPPsite 2.0

Here we provide links to all the web servers/tools, which are developed for peptides with special emphasis on therapeutic peptides. This will help researchers to find a tool that will be relevant to their area of peptide research.

Peptide Prediction Servers

S. No.NameDescription

AntiCP

A web server for designing and discovering novel anticancer peptides.

ToxinPred

In silico approach for predicting toxicity of peptides and proteins.

AntiBP2

Server for antibacterial peptide prediction.

TumorHPD

Server for designing of tumor homing peptides.

HLP

A web server for predicting half-life of peptides in intestine like environment.

CellPPD

Server for designing of cell penetrating peptides.

HemoPI

A server for prediction of hemolytic potency of peptides.

AntiAngioPred

A Server for prediction and designing of antiangiogenic peptides.

PEPstr

A Server for prediction of tertiary structure of peptides.

PEPstrMOD

Structure prediction of peptides containing natural, non-natural and modified residues.

PEP-FOLD

A de novo approach for predicting peptide structures from amino acid sequences.

PEP2D

A web server for predicting secondary structure of peptides.

ProPred

MHC Class-II binding peptide prediction server.

MHC2Pred

SVM-based method for prediction of promiscuous MHC Class II binders

IL4pred

In silico platform for designing and disovery of interleukin-4 inducing peptides.

IFNepitope

A server for predicting and designing interferon-gamma inducing peptides.

Peptide Databases

S.No.NameDescription

BIOPEP

BIOPEP database and other programs for processing bioactive peptide sequences

Brainpeps

Blood-brain barrier properties of peptides

CAMP

Collection of sequences and structures of antimicrobial peptides

CPPsite

A curated database of cell penetrating peptides

EROP-Moscow

The EROP-Moscow oligopeptide database

MilkAMP

A comprehensive database of antimicrobial peptides of dairy origin

RAPD

Recombinantly-produced Antimicrobial Peptides Database

TumorHoPe

A database of Tumor Homing Peptides

Hemolytik

Database of hemolytic peptides

SPdb

A signal peptide resource

Quorumpeps

Chemical space, microbial origin and functionality of quorum sensing peptides

YADAMP

Anti-microbial Database

PeptideDB

Bioactive peptide database in Metazoa

IEDB

Immune Epitope Database

SYFPEITHI

Database for MHC ligands and peptide motifs

MHCBN 4.0

MHC binding and non-binding peptides

AntiJen

Quantitative binding data for peptides binding to MHC Ligand, TCR-MHC Complexes, T Cell Epitope, TAP, B Cell Epitope molecules and immunological Protein-Protein interactions

Bcipep

Database of B-cell epitopes

ACEpepDB

Food derived antihypertensive peptides

Human Urine Peptide Database

A database of naturally occurring human urinary peptides and proteins for use in clinical applications

PepBank

Peptides based on sequence text mining and public peptide data sources.

PhytAMP

database dedicated to antimicrobial plant peptides

EPIMHC

A curated database of MHC-binding peptides for customized computational vaccinology.

ParaPep

A repository of experimentally validated anti-parasitic peptides

CancerPPD

Database of Anticancer peptides and proteins

PEPlife

A database of half life of peptides

DADP

Database of Anuran Defense Peptides

DAMPD

Dragon Antimicrobial Peptide Database

APD2

The Antimicrobial Peptide Database

AMPer

A Database and an Automated Discovery Tool for Gene-Coded Antimicrobial Peptides

DEFENSINS Knowledgebase

Manually curated database and information source devoted to the defensin family of antimicrobial peptides

NeuroPep

A comprehensive resource of Neuropeptides

NeuroPedia

Neuropeptide database and spectral library.

MPID-T2

MHC-Peptide Interaction Database-TR version 2

Signal Peptide website

An Information Platform for Signal Sequences and Signal Peptides

SwePep

Database designed for endogenous peptides and mass spectrometry

AVPdb

Database of experimentally validated antiviral peptides

Peptaibol

Peptaibols generally exhibit antimicrobial activity and are referred to as antibiotic peptides

PEPTIDOME DB

A comprehensive fact-database for endogenous peptides

NORINE

A database of nonribosomal peptides

ConoServer

A database for conopeptides which are peptides expressed by carnivorous marine cone snails

BaAMPs

Biofilm-active AMPs database: antimicrobial peptides (AMPs) specifically tested against microbial biofilms.

BACTIBASE

A data repository of bacteriocin natural antimicrobial peptides

LAMP

A database linking antimicrobial peptide.

DBAASP

Database of Antimicrobial Activity and Structure of Peptides

HIPdb

A Database of Experimentally Validated HIV Inhibiting Peptides

HMRBase

A database of hormones and their receptors

BactPepDB

a database of predicted peptides from a exhaustive survey of complete prokaryote genomes