Peptide Related Links at CPPsite 2.0

Here we provide links to all the web servers/tools, which are developed for peptides with special emphasis on therapeutic peptides. This will help researchers to find a tool that will be relevant to their area of peptide research.

Peptide Prediction Servers S. No. Name Description AntiCP A web server for designing and discovering novel anticancer peptides. ToxinPred In silico approach for predicting toxicity of peptides and proteins. AntiBP2 Server for antibacterial peptide prediction. TumorHPD Server for designing of tumor homing peptides. HLP A web server for predicting half-life of peptides in intestine like environment. CellPPD Server for designing of cell penetrating peptides. HemoPI A server for prediction of hemolytic potency of peptides. AntiAngioPred A Server for prediction and designing of antiangiogenic peptides. PEPstr A Server for prediction of tertiary structure of peptides. PEPstrMOD Structure prediction of peptides containing natural, non-natural and modified residues. PEP-FOLD A de novo approach for predicting peptide structures from amino acid sequences. PEP2D A web server for predicting secondary structure of peptides. ProPred MHC Class-II binding peptide prediction server. MHC2Pred SVM-based method for prediction of promiscuous MHC Class II binders IL4pred In silico platform for designing and disovery of interleukin-4 inducing peptides. IFNepitope A server for predicting and designing interferon-gamma inducing peptides. Peptide Databases S.No. Name Description BIOPEP BIOPEP database and other programs for processing bioactive peptide sequences Brainpeps Blood-brain barrier properties of peptides CAMP Collection of sequences and structures of antimicrobial peptides CPPsite A curated database of cell penetrating peptides EROP-Moscow The EROP-Moscow oligopeptide database MilkAMP A comprehensive database of antimicrobial peptides of dairy origin RAPD Recombinantly-produced Antimicrobial Peptides Database TumorHoPe A database of Tumor Homing Peptides Hemolytik Database of hemolytic peptides SPdb A signal peptide resource Quorumpeps Chemical space, microbial origin and functionality of quorum sensing peptides YADAMP Anti-microbial Database PeptideDB Bioactive peptide database in Metazoa IEDB Immune Epitope Database SYFPEITHI Database for MHC ligands and peptide motifs MHCBN 4.0 MHC binding and non-binding peptides AntiJen Quantitative binding data for peptides binding to MHC Ligand, TCR-MHC Complexes, T Cell Epitope, TAP, B Cell Epitope molecules and immunological Protein-Protein interactions Bcipep Database of B-cell epitopes ACEpepDB Food derived antihypertensive peptides Human Urine Peptide Database A database of naturally occurring human urinary peptides and proteins for use in clinical applications PepBank Peptides based on sequence text mining and public peptide data sources. PhytAMP database dedicated to antimicrobial plant peptides EPIMHC A curated database of MHC-binding peptides for customized computational vaccinology. ParaPep A repository of experimentally validated anti-parasitic peptides CancerPPD Database of Anticancer peptides and proteins PEPlife A database of half life of peptides DADP Database of Anuran Defense Peptides DAMPD Dragon Antimicrobial Peptide Database APD2 The Antimicrobial Peptide Database AMPer A Database and an Automated Discovery Tool for Gene-Coded Antimicrobial Peptides DEFENSINS Knowledgebase Manually curated database and information source devoted to the defensin family of antimicrobial peptides NeuroPep A comprehensive resource of Neuropeptides NeuroPedia Neuropeptide database and spectral library. MPID-T2 MHC-Peptide Interaction Database-TR version 2 Signal Peptide website An Information Platform for Signal Sequences and Signal Peptides SwePep Database designed for endogenous peptides and mass spectrometry AVPdb Database of experimentally validated antiviral peptides Peptaibol Peptaibols generally exhibit antimicrobial activity and are referred to as antibiotic peptides PEPTIDOME DB A comprehensive fact-database for endogenous peptides NORINE A database of nonribosomal peptides ConoServer A database for conopeptides which are peptides expressed by carnivorous marine cone snails BaAMPs Biofilm-active AMPs database: antimicrobial peptides (AMPs) specifically tested against microbial biofilms. BACTIBASE A data repository of bacteriocin natural antimicrobial peptides LAMP A database linking antimicrobial peptide. DBAASP Database of Antimicrobial Activity and Structure of Peptides HIPdb A Database of Experimentally Validated HIV Inhibiting Peptides HMRBase A database of hormones and their receptors BactPepDB a database of predicted peptides from a exhaustive survey of complete prokaryote genomes