Welcome to Tertiary structure Page of CPPsite 2.0

This module allow users to perform structure based similarity against CPPsite 2.0. User may submit tertiary structure of their peptide to search cell penetrating peptides having similar structure. The page can accept the input in major file formats (PDB, Smiles). In addition user may select desired search options (searching is performed using JCsearch). The PDB format is set as default format.

PDB search Page

This module had been designed with the aim to provide virtual screening facility to scientific community. Using this tool, users can screen their peptide library and identify similar or exact peptides from various databases. The input for this module could be provided by 1) pasting the peptide structure in defined text area OR 2) Upload the structure file in standard PDB format. For more information click HELP

Paste your structure(s) *


Upload File :
Example file

Select type of search: Substructure Search | Exact Search
                                 Exact Fragment search | Superstructure Search


* This is an example of TP10 Cell Penetrating Peptide