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Page - 1 of 7
HIVsir ID
HIV Strain
NCBI Accession
Target Gene
Position of siRNA target
Sense Sequence of siRNA
Efficacy (%)
Target Conservation *
Cell line
PubMed
1561
HIV-1 (LAI)
K02013
Pol
N/A
AUGGCAGGAAGAAGCGGAG
87.00
1100(73.53%)
293 T
18180777
1118
HIV-1 (LAI)
K02013
Gag
326
AAGGAGAGAGAUGGGUGCG
52.00
893(59.69%)
293 T
16959541
1119
HIV-1 (LAI)
K02013
Gag
327
AGGAGAGAGAUGGGUGCGA
93.00
920(61.50%)
293 T
16959541
1120
HIV-1 (LAI)
K02013
Gag
328
GGAGAGAGAUGGGUGCGAG
93.00
926(61.90%)
293 T
16959541
1121
HIV-1 (LAI)
K02013
Gag
329
GAGAGAGAUGGGUGCGAGA
98.00
920(61.50%)
293 T
16959541
1122
HIV-1 (LAI)
K02013
Gag
330
AGAGAGAUGGGUGCGAGAG
94.00
920(61.50%)
293 T
16959541
1123
HIV-1 (LAI)
K02013
Gag
331
GAGAGAUGGGUGCGAGAGC
67.00
929(62.10%)
293 T
16959541
1124
HIV-1 (LAI)
K02013
Gag
332
AGAGAUGGGUGCGAGAGCG
83.00
930(62.17%)
293 T
16959541
1125
HIV-1 (LAI)
K02013
Gag
333
GAGAUGGGUGCGAGAGCGU
78.00
928(62.03%)
293 T
16959541
1126
HIV-1 (LAI)
K02013
Gag
334
AGAUGGGUGCGAGAGCGUC
90.00
936(62.57%)
293 T
16959541
1127
HIV-1 (LAI)
K02013
Gag
1146
AAUAAAAUAGUAAGAAUGU
26.00
1022(68.32%)
293 T
16959541
1128
HIV-1 (LAI)
K02013
Gag
1147
AUAAAAUAGUAAGAAUGUA
30.00
1026(68.58%)
293 T
16959541
1129
HIV-1 (LAI)
K02013
Gag
1363
UAGAAGAAAUGAUGACAGC
45.00
1213(81.08%)
293 T
16959541
1130
HIV-1 (LAI)
K02013
Gag
1364
AGAAGAAAUGAUGACAGCA
64.00
1178(78.74%)
293 T
16959541
1131
HIV-1 (LAI)
K02013
Gag
1365
GAAGAAAUGAUGACAGCAU
85.00
1197(80.01%)
293 T
16959541
1132
HIV-1 (LAI)
K02013
Gag
1366
AAGAAAUGAUGACAGCAUG
74.00
1197(80.01%)
293 T
16959541
1133
HIV-1 (LAI)
K02013
Gag
1623
CAGGCUAAUUUUUUAGGGA
20.00
1311(87.63%)
293 T
16959541
1134
HIV-1 (LAI)
K02013
Gag
1624
AGGCUAAUUUUUUAGGGAA
75.00
1192(79.68%)
293 T
16959541
1135
HIV-1 (LAI)
K02013
Pol
1910
ACAGGAGCAGAUGAUACAG
96.00
1276(85.29%)
293 T
16959541
1136
HIV-1 (LAI)
K02013
Pol
1911
CAGGAGCAGAUGAUACAGU
86.00
1276(85.29%)
293 T
16959541
1137
HIV-1 (LAI)
K02013
Pol
1957
AUGGAAACCAAAAAUGAUA
63.00
1168(78.07%)
293 T
16959541
1138
HIV-1 (LAI)
K02013
Pol
1958
UGGAAACCAAAAAUGAUAG
54.00
1204(80.48%)
293 T
16959541
1139
HIV-1 (LAI)
K02013
Pol
1959
GGAAACCAAAAAUGAUAGG
0.00
1204(80.48%)
293 T
16959541
1140
HIV-1 (LAI)
K02013
Pol
3755
AUUGGAGGAAAUGAACAAG
95.00
1126(75.27%)
293 T
16959541
1141
HIV-1 (LAI)
K02013
Pol
3756
UUGGAGGAAAUGAACAAGU
54.00
1125(75.20%)
293 T
16959541
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