The results of the prediction displayed in user-freindly text formats.Each of result display format firstly provides a compehensive account of length of input sequence,prediction approach,nonamers generated and threshold as shown below.
This format display all overlapping predicted MHC binders in separate lines.This is very useful in detecting the overlapping MHC binders.The display provides a clear indication about the exact position of predicted binder.An example is shown below.
A sample of HTML I result display format.
This format dispalys all predicted binder for specific MHC allele in the single line just by coloring the predicted binders.The starting residue of each predicted binder is shown is red and while rest of the residues in blue color.The option is very useful in detecting the promiscious MHC binder in the sequence.The example of HTML II display format is shown below.
HTML II result display for
This one is the most common display format used by most prediction methods.The peptides are displayed in table in desending order of their score.The predicted binders of each MHC allele are shown in seprate tablesThe server also provides the facility to customise the number of the top scorer peptides to be displayed in each table.
A sample of tabular display format.