Antigen Alignment Page

Similarity search is the most widely used method of finding homologies and functional annotation. If a protein sequence of new strain shows similarity with a experimentally annotated protein, then unknown protein can be predicted to have same function. Keeping this in view, BLAST search was provided to identifit similar protein in different strain of Mycobacterium tuberculosis. User can do BLAST search of their protein against any or all of Mycobacterium tuberculosis proteome. The server provide option to modify different parameters like scoring matrices, gap penalty, word size etc.

 Type/paste query sequence in FASTA format
 (Please submit one sequence at a time.
The program will ignore all non-standard characters)

or Upload your sequence