Strain Card

The is the strain card and all its information available in our database. Thhe information includes the result of experiemtnal epitope mapping and prediction from various algorithms. Experimental epitopes were mapped from IEDB repository were B cell, T cell and MHC binders. The prediction tools including B cell epitope (LBtope), MHC class I binding alleles (Propred1), MHC class II binding alleles (Propred), CTL epitope (CTLpred), HLA alleles (nHLApred), interferon-gamma inducing potential (IFNepitope), Interleukin-4 inducing capacity (IL4pred).
Descriptionit is also known as Mycobacterium ulcerans subsp. liflandii, was first isolated from a colony of African clawed frogs. This organism causes a fatal systemic disease in frogs often characterized by skin lesions. Mycobacterium liflandii produces a polyketide toxin mycolactone E and two highly antigenic proteins ESAT-6 and CFP-10 which account, in part, for its pathogenicity.
CategoryNon tuberculoid Mycobacteria
Genome visualizationUsing Jbrowse, CGview, Argo applet
Number of proteins5064
B cell epitopes (IEDB)36
T cell epitopes (IEDB)75
MHC binder (IEDB)136
No. of Vaccine Target3
B cell prediction (LBtope)54
Prediction of MHC class II binders (Propred)104
MHC class I prediction (Propred1)533
CTL epitope prediction (CTLpred)127
Prediction of Interferon-gamma inducing peptides (IFNepitope)274
Prediction of IL4 inducing peptides (IL4pred)533