Strain Card

The is the strain card and all its information available in our database. Thhe information includes the result of experiemtnal epitope mapping and prediction from various algorithms. Experimental epitopes were mapped from IEDB repository were B cell, T cell and MHC binders. The prediction tools including B cell epitope (LBtope), MHC class I binding alleles (Propred1), MHC class II binding alleles (Propred), CTL epitope (CTLpred), HLA alleles (nHLApred), interferon-gamma inducing potential (IFNepitope), Interleukin-4 inducing capacity (IL4pred).
DescriptionMycobacterium massiliense is a rapidly growing bacteria associated with opportunistic infections. A representative isolate (strain GO 06) recovered from wound samples of patients submitted to arthroscopic and laparoscopic surgeries had its genome sequenced.
CategoryNon tuberculoid Mycobacteria
Genome visualizationUsing Jbrowse, CGview, Argo applet
Number of proteins2626
B cell epitopes (IEDB)9
T cell epitopes (IEDB)30
MHC binder (IEDB)72
Vaccine TargetNo