Strain Card

The is the strain card and all its information available in our database. Thhe information includes the result of experiemtnal epitope mapping and prediction from various algorithms. Experimental epitopes were mapped from IEDB repository were B cell, T cell and MHC binders. The prediction tools including B cell epitope (LBtope), MHC class I binding alleles (Propred1), MHC class II binding alleles (Propred), CTL epitope (CTLpred), HLA alleles (nHLApred), interferon-gamma inducing potential (IFNepitope), Interleukin-4 inducing capacity (IL4pred).
DescriptionThis organism causes Buruli ulcer and is the third most common mycobacterial pathogen after Mycobacterium tuberculosis and Mycobacterium leprae. The disease has increased dramatically through central and West Africa since the late 1980s.
CategoryNon tuberculoid Mycobacteria
Genome visualizationUsing Jbrowse, CGview, Argo applet
Number of proteins4241
B cell epitopes (IEDB)28
T cell epitopes (IEDB)54
MHC binder (IEDB)126
No. of Vaccine Target3
B cell prediction (LBtope)62
Prediction of MHC class II binders (Propred)122
MHC class I prediction (Propred1)583
CTL epitope prediction (CTLpred)143
Prediction of Interferon-gamma inducing peptides (IFNepitope)324
Prediction of IL4 inducing peptides (IL4pred)586