Strain Card

The is the strain card and all its information available in our database. Thhe information includes the result of experiemtnal epitope mapping and prediction from various algorithms. Experimental epitopes were mapped from IEDB repository were B cell, T cell and MHC binders. The prediction tools including B cell epitope (LBtope), MHC class I binding alleles (Propred1), MHC class II binding alleles (Propred), CTL epitope (CTLpred), HLA alleles (nHLApred), interferon-gamma inducing potential (IFNepitope), Interleukin-4 inducing capacity (IL4pred).
DescriptionThis M.tuberculosis isolate was cultivated in Molecular-genetic research lab of Central Tuberculosis Research Institute. This strain is sensitive to all common drugs used in tuberculosis treatment.
CategoryTuberculoid Mycobacteria
Genome visualizationUsing Jbrowse, CGview, Argo applet
Number of proteins3944
B cell epitopes (IEDB)97
T cell epitopes (IEDB)232
MHC binder (IEDB)364
No. of Vaccine Target160
B cell prediction (LBtope)5030
Prediction of MHC class II binders (Propred)9224
MHC class I prediction (Propred1)43032
CTL epitope prediction (CTLpred)10118
Prediction of Interferon-gamma inducing peptides (IFNepitope)25944
Prediction of IL4 inducing peptides (IL4pred)40527