Strain Card

The is the strain card and all its information available in our database. Thhe information includes the result of experiemtnal epitope mapping and prediction from various algorithms. Experimental epitopes were mapped from IEDB repository were B cell, T cell and MHC binders. The prediction tools including B cell epitope (LBtope), MHC class I binding alleles (Propred1), MHC class II binding alleles (Propred), CTL epitope (CTLpred), HLA alleles (nHLApred), interferon-gamma inducing potential (IFNepitope), Interleukin-4 inducing capacity (IL4pred).
DescriptionMycobacterium tuberculosis KZN 4207 is a wild-type (drug-sensitive) strain from the KwaZulu-Natal region in South Africa.
CategoryTuberculoid Mycobacteria
Genome visualizationUsing Jbrowse, CGview, Argo applet
Number of proteins4144
B cell epitopes (IEDB)81
T cell epitopes (IEDB)216
MHC binder (IEDB)341
No. of Vaccine Target141
B cell prediction (LBtope)4470
Prediction of MHC class II binders (Propred)8636
MHC class I prediction (Propred1)39934
CTL epitope prediction (CTLpred)9541
Prediction of Interferon-gamma inducing peptides (IFNepitope)23940
Prediction of IL4 inducing peptides (IL4pred)37380