Strain Card


The is the strain card and all its information available in our database. Thhe information includes the result of experiemtnal epitope mapping and prediction from various algorithms. Experimental epitopes were mapped from IEDB repository were B cell, T cell and MHC binders. The prediction tools including B cell epitope (LBtope), MHC class I binding alleles (Propred1), MHC class II binding alleles (Propred), CTL epitope (CTLpred), HLA alleles (nHLApred), interferon-gamma inducing potential (IFNepitope), Interleukin-4 inducing capacity (IL4pred).
StrainMycobacterium_sp_JLS
DescriptionThis organism was isolated from creosote-contaminated soil from the Champion International Superfund site in Libby, Montana. This microbe, along with some others collected at this site, are able to rapidly mineralize 14C-labeled pyrene.
CategoryNon tuberculoid Mycobacteria
Genome visualizationUsing Jbrowse, CGview, Argo applet
Number of proteins5739
B cell epitopes (IEDB)22
T cell epitopes (IEDB)41
MHC binder (IEDB)96
Vaccine TargetNo