Strain Card


The is the strain card and all its information available in our database. Thhe information includes the result of experiemtnal epitope mapping and prediction from various algorithms. Experimental epitopes were mapped from IEDB repository were B cell, T cell and MHC binders. The prediction tools including B cell epitope (LBtope), MHC class I binding alleles (Propred1), MHC class II binding alleles (Propred), CTL epitope (CTLpred), HLA alleles (nHLApred), interferon-gamma inducing potential (IFNepitope), Interleukin-4 inducing capacity (IL4pred).
StrainMycobacterium_sp_MOTT36Y
Description
Category
Genome visualizationUsing Jbrowse, CGview, Argo applet
Number of proteins5128
B cell epitopes (IEDB)32
T cell epitopes (IEDB)71
MHC binder (IEDB)124
No. of Vaccine Target3
B cell prediction (LBtope)53
Prediction of MHC class II binders (Propred)123
MHC class I prediction (Propred1)588
CTL epitope prediction (CTLpred)139
Prediction of Interferon-gamma inducing peptides (IFNepitope)329
Prediction of IL4 inducing peptides (IL4pred)576