S. No.

Resource

Year

Description

Working URL

1

E-CRISP

2014

CRIPSR target site prediction tool

http://www.e-crisp.org/E-CRISP/

2

CHOPCHOP

2014

Web tool for designing of CRISPR/Cas9 and TALENs

https://chopchop.rc.fas.harvard.edu/

3

CRISPRstrand

2014

Repeat orientation prediction tool to determine crRNA encoding strand at CRISPR loci

http://rna.informatik.uni-freiburg.de/CRISPRmap/Input.jsp‎

4

sgRNAcas9

2014

A software package for designing CRISPR sgRNA and evaluating potential off-target cleavage sites

http://www.biootools.com/

5

SSFinder

2014

CRISPR-Cas target site prediction tool

https://code.google.com/p/ssfinder/

6

CRISPR-P

2014

A Web Tool for Synthetic Single-Guide RNA Design of CRISPR-System in Plants

http://cbi.hzau.edu.cn/crispr/

7

GT-Scan

2014

Identifying unique genomic targets

http://gt-scan.braembl.org.au/gt-scan/

8

CasOT

2014

A genome-wide Cas9/gRNA off-target searching tool

http://eendb.zfgenetics.org/casot/

9

Cas-OFFinder

2014

A fast and versatile algorithm that searches for potential off target sites of Cas9 Rna guided endonucleases

http://www.rgenome.net/cas-offinder

10

CRISPRTarget

2013

Bioinformatics tool that helps in prediction and analysis of targets of CRISPR RNAs.
It compares the Crispr sequences with the viral genomes

http://bioanalysis.otago.ac.nz/CRISPRTarget/crispr_analysis.html

11

CRISPI

2009

Database that finds CRISPRs in given genomes and calculates its similarity with other sequences

http://crispi.genouest.org/

12

CRISPRdb

2007

Database of finding CRISPRs and repeat element extraction tool

http://crispr.u-psud.fr/crispr/

13

CRISPRdirect

2014

Rational design of CRISPR/Cas target

http://crispr.dbcls.jp