BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ohv2-miR-17-16
(7 letters)
Database: /home/users/abid/BLAST/MIRBASE
35,828 sequences; 286,624 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
prd-miR-7897-5p MIMAT0030586 Panagrellus redivivus miR-7897-5p 14 20
bta-miR-2285aa MIMAT0030435 Bos taurus miR-2285aa 14 20
mdo-miR-7262b-3p MIMAT0028545 Monodelphis domestica miR-7262b-3p 14 20
mml-miR-1243-3p MIMAT0024338 Macaca mulatta miR-1243-3p 14 20
ola-miR-145 MIMAT0022669 Oryzias latipes miR-145 14 20
sko-miR-4823-3p MIMAT0020028 Saccoglossus kowalevskii miR-4823-3p 14 20
hsa-miR-4328 MIMAT0016926 Homo sapiens miR-4328 14 20
bmo-miR-3396 MIMAT0015600 Bombyx mori miR-3396 14 20
dme-miR-2498-3p MIMAT0012211 Drosophila melanogaster miR-2498-3p 14 20
gga-miR-1631 MIMAT0007502 Gallus gallus miR-1631 14 20
oha-miR-193-3p MIMAT0036780 Ophiophagus hannah miR-193-3p 12 80
oha-miR-145-5p MIMAT0036727 Ophiophagus hannah miR-145-5p 12 80
tch-miR-193a-3p MIMAT0036584 Tupaia chinensis miR-193a-3p 12 80
tch-miR-193b-3p MIMAT0036532 Tupaia chinensis miR-193b-3p 12 80
chi-miR-193b-3p MIMAT0036028 Capra hircus miR-193b-3p 12 80
chi-miR-193a MIMAT0036026 Capra hircus miR-193a 12 80
chi-miR-145-5p MIMAT0035967 Capra hircus miR-145-5p 12 80
rno-miR-193b-3p MIMAT0035734 Rattus norvegicus miR-193b-3p 12 80
bdi-miR2275b MIMAT0035534 Brachypodium distachyon miR2275b 12 80
efu-miR-193a MIMAT0035142 Eptesicus fuscus miR-193a 12 80
efu-miR-145 MIMAT0035122 Eptesicus fuscus miR-145 12 80
efu-miR-9230b MIMAT0034834 Eptesicus fuscus miR-9230b 12 80
gra-miR8747 MIMAT0034171 Gossypium raimondii miR8747 12 80
sma-miR-8446-3p MIMAT0033603 Schistosoma mansoni miR-8446-3p 12 80
str-miR-255-3p MIMAT0033457 Strongyloides ratti miR-255-3p 12 80
ppc-miR-8224-3p MIMAT0032891 Pristionchus pacificus miR-8224-3p 12 80
ppc-miR-8216-5p MIMAT0032862 Pristionchus pacificus miR-8216-5p 12 80
ssa-miR-193-3p MIMAT0032446 Salmo salar miR-193-3p 12 80
ssa-miR-145-5p MIMAT0032369 Salmo salar miR-145-5p 12 80
prd-miR-255-3p MIMAT0030761 Panagrellus redivivus miR-255-3p 12 80
bta-miR-7859 MIMAT0030434 Bos taurus miR-7859 12 80
bdi-miR7766-5p MIMAT0030280 Brachypodium distachyon miR7766-5p 12 80
crm-miR-255 MIMAT0029922 Caenorhabditis remanei miR-255 12 80
mmu-miR-7664-5p MIMAT0029834 Mus musculus miR-7664-5p 12 80
cbn-miR-255 MIMAT0029768 Caenorhabditis brenneri miR-255 12 80
ipu-miR-145 MIMAT0029422 Ictalurus punctatus miR-145 12 80
mdo-miR-193b-3p MIMAT0028653 Monodelphis domestica miR-193b-3p 12 80
dev-miR-D8-3p MIMAT0028179 Duck enteritis miR-D8-3p 12 80
ccr-miR-193a MIMAT0026251 Cyprinus carpio miR-193a 12 80
gga-miR-6710-3p MIMAT0025820 Gallus gallus miR-6710-3p 12 80
hsa-miR-548az-3p MIMAT0025457 Homo sapiens miR-548az-3p 12 80
mmu-miR-6372 MIMAT0025116 Mus musculus miR-6372 12 80
mmu-miR-145b MIMAT0025105 Mus musculus miR-145b 12 80
hme-miR-6301-3p MIMAT0025005 Heliconius melpomene miR-6301-3p 12 80
ggo-miR-4738 MIMAT0024284 Gorilla gorilla miR-4738 12 80
ggo-miR-548e MIMAT0024276 Gorilla gorilla miR-548e 12 80
ggo-miR-193a MIMAT0024174 Gorilla gorilla miR-193a 12 80
ptr-miR-548e MIMAT0024057 Pan troglodytes miR-548e 12 80
cgr-miR-193b-3p MIMAT0023826 Cricetulus griseus miR-193b-3p 12 80
ame-miR-6006-5p MIMAT0023553 Apis mellifera miR-6006-5p 12 80
hco-miR-255 MIMAT0023411 Haemonchus contortus miR-255 12 80
hco-miR-5898-3p MIMAT0023343 Haemonchus contortus miR-5898-3p 12 80
sha-miR-193 MIMAT0022792 Sarcophilus harrisii miR-193 12 80
ola-miR-193a MIMAT0022528 Oryzias latipes miR-193a 12 80
hsa-miR-548ar-3p MIMAT0022266 Homo sapiens miR-548ar-3p 12 80
aca-miR-193-3p MIMAT0021827 Anolis carolinensis miR-193-3p 12 80
aca-miR-145-5p MIMAT0021773 Anolis carolinensis miR-145-5p 12 80
mtr-miR5286b MIMAT0021352 Medicago truncatula miR5286b 12 80
hsa-miR-5195-3p MIMAT0021127 Homo sapiens miR-5195-3p 12 80
hsa-miR-4738-3p MIMAT0019867 Homo sapiens miR-4738-3p 12 80
pma-miR-145-5p MIMAT0019476 Petromyzon marinus miR-145-5p 12 80
ppy-miR-193b MIMAT0015789 Pongo pygmaeus miR-193b 12 80
ppy-miR-193a-3p MIMAT0015788 Pongo pygmaeus miR-193a-3p 12 80
ghr-miR3476-5p MIMAT0015653 Gossypium hirsutum miR3476-5p 12 80
mmu-miR-3112-3p MIMAT0014956 Mus musculus miR-3112-3p 12 80
tgu-miR-193a-3p MIMAT0014585 Taeniopygia guttata miR-193a-3p 12 80
ssc-miR-935 MIMAT0013947 Sus scrofa miR-935 12 80
ssc-miR-193a-3p MIMAT0013895 Sus scrofa miR-193a-3p 12 80
eca-miR-145 MIMAT0013064 Equus caballus miR-145 12 80
eca-miR-193b MIMAT0013056 Equus caballus miR-193b 12 80
eca-miR-193a-3p MIMAT0013026 Equus caballus miR-193a-3p 12 80
rno-miR-935 MIMAT0012845 Rattus norvegicus miR-935 12 80
bta-miR-2352 MIMAT0011888 Bos taurus miR-2352 12 80
bta-miR-2313-3p MIMAT0011830 Bos taurus miR-2313-3p 12 80
bta-miR-2285a MIMAT0011797 Bos taurus miR-2285a 12 80
zma-miR2275c-3p MIMAT0011772 Zea mays miR2275c-3p 12 80
zma-miR2275b-3p MIMAT0011770 Zea mays miR2275b-3p 12 80
sme-miR-2157-3p MIMAT0012148 Schmidtea mediterranea miR-2157-3p 12 80
mtr-miR2086-5p MIMAT0010026 Medicago truncatula miR2086-5p 12 80
cfa-miR-145 MIMAT0009863 Canis familiaris miR-145 12 80
sko-miR-193a-3p MIMAT0009635 Saccoglossus kowalevskii miR-193a-3p 12 80
cte-miR-193 MIMAT0009533 Capitella teleta miR-193 12 80
bta-miR-935 MIMAT0009385 Bos taurus miR-935 12 80
bta-miR-193b MIMAT0009253 Bos taurus miR-193b 12 80
ptr-miR-935 MIMAT0008342 Pan troglodytes miR-935 12 80
ptr-miR-548f MIMAT0008221 Pan troglodytes miR-548f 12 80
ptr-miR-548a MIMAT0008218 Pan troglodytes miR-548a 12 80
ptr-miR-193b MIMAT0008059 Pan troglodytes miR-193b 12 80
ptr-miR-193a MIMAT0008058 Pan troglodytes miR-193a 12 80
osa-miR1847.1 MIMAT0007766 Oryza sativa miR1847.1 12 80
mml-miR-193b-3p MIMAT0006227 Macaca mulatta miR-193b-3p 12 80
mml-miR-193a-3p MIMAT0006226 Macaca mulatta miR-193a-3p 12 80
gga-miR-193a-3p MIMAT0007740 Gallus gallus miR-193a-3p 12 80
oan-miR-1422q-3p MIMAT0007317 Ornithorhynchus anatinus miR-1422q-3p 12 80
oan-miR-145-5p MIMAT0007141 Ornithorhynchus anatinus miR-145-5p 12 80
oan-miR-1342 MIMAT0006873 Ornithorhynchus anatinus miR-1342 12 80
oan-miR-193-3p MIMAT0006821 Ornithorhynchus anatinus miR-193-3p 12 80
hsa-miR-548f-3p MIMAT0005895 Homo sapiens miR-548f-3p 12 80
hsa-miR-1243 MIMAT0005894 Homo sapiens miR-1243 12 80
hsa-miR-548e-3p MIMAT0005874 Homo sapiens miR-548e-3p 12 80
ddi-miR-1177 MIMAT0005532 Dictyostelium discoideum miR-1177 12 80
hsa-miR-935 MIMAT0004978 Homo sapiens miR-935 12 80
mmu-miR-193b-3p MIMAT0004859 Mus musculus miR-193b-3p 12 80
cbr-miR-255 MIMAT0004297 Caenorhabditis briggsae miR-255 12 80
ath-miR837-5p MIMAT0004258 Arabidopsis thaliana miR837-5p 12 80
mdo-miR-193a-3p MIMAT0004123 Monodelphis domestica miR-193a-3p 12 80
mdo-miR-145-5p MIMAT0004116 Monodelphis domestica miR-145-5p 12 80
sme-miR-61a-5p MIMAT0012105 Schmidtea mediterranea miR-61a-5p 12 80
bta-miR-193a-3p MIMAT0003795 Bos taurus miR-193a-3p 12 80
xtr-miR-145 MIMAT0003688 Xenopus tropicalis miR-145 12 80
xtr-miR-193 MIMAT0003616 Xenopus tropicalis miR-193 12 80
dre-miR-723-5p MIMAT0003750 Danio rerio miR-723-5p 12 80
bta-miR-145 MIMAT0003542 Bos taurus miR-145 12 80
gga-miR-193b-3p MIMAT0003353 Gallus gallus miR-193b-3p 12 80
hsa-miR-548a-3p MIMAT0003251 Homo sapiens miR-548a-3p 12 80
tni-miR-193 MIMAT0002970 Tetraodon nigroviridis miR-193 12 80
fru-miR-193 MIMAT0002969 Fugu rubripes miR-193 12 80
hsa-miR-193b-3p MIMAT0002819 Homo sapiens miR-193b-3p 12 80
mne-miR-145 MIMAT0002270 Macaca nemestrina miR-145 12 80
ppy-miR-145 MIMAT0002269 Pongo pygmaeus miR-145 12 80
ggo-miR-145 MIMAT0002268 Gorilla gorilla miR-145 12 80
ptr-miR-145 MIMAT0002267 Pan troglodytes miR-145 12 80
mml-miR-145-5p MIMAT0002266 Macaca mulatta miR-145-5p 12 80
ssc-miR-145-5p MIMAT0002123 Sus scrofa miR-145-5p 12 80
dre-miR-193b-3p MIMAT0001857 Danio rerio miR-193b-3p 12 80
dre-miR-193a-3p MIMAT0001856 Danio rerio miR-193a-3p 12 80
dre-miR-145-5p MIMAT0001842 Danio rerio miR-145-5p 12 80
mghv-miR-M1-6-3p MIMAT0001569 Mouse gammaherpesvirus miR-M1-6-3p 12 80
ath-miR401 MIMAT0001002 Arabidopsis thaliana miR401 12 80
rno-miR-193a-3p MIMAT0000868 Rattus norvegicus miR-193a-3p 12 80
rno-miR-145-5p MIMAT0000851 Rattus norvegicus miR-145-5p 12 80
hsa-miR-193a-3p MIMAT0000459 Homo sapiens miR-193a-3p 12 80
hsa-miR-145-5p MIMAT0000437 Homo sapiens miR-145-5p 12 80
cel-miR-255-3p MIMAT0004216 Caenorhabditis elegans miR-255-3p 12 80
mmu-miR-193a-3p MIMAT0000223 Mus musculus miR-193a-3p 12 80
mmu-miR-145a-5p MIMAT0000157 Mus musculus miR-145a-5p 12 80
cel-miR-60-5p MIMAT0015102 Caenorhabditis elegans miR-60-5p 12 80
cel-miR-49-5p MIMAT0020309 Caenorhabditis elegans miR-49-5p 12 80
>prd-miR-7897-5p MIMAT0030586 Panagrellus redivivus miR-7897-5p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 aaactgg 7
|||||||
Sbjct: 8 aaactgg 2
>bta-miR-2285aa MIMAT0030435 Bos taurus miR-2285aa
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 aaactgg 7
|||||||
Sbjct: 2 aaactgg 8
>mdo-miR-7262b-3p MIMAT0028545 Monodelphis domestica
miR-7262b-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 aaactgg 7
|||||||
Sbjct: 1 aaactgg 7
>mml-miR-1243-3p MIMAT0024338 Macaca mulatta miR-1243-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 aaactgg 7
|||||||
Sbjct: 1 aaactgg 7
>ola-miR-145 MIMAT0022669 Oryzias latipes miR-145
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 aaactgg 7
|||||||
Sbjct: 8 aaactgg 2
>sko-miR-4823-3p MIMAT0020028 Saccoglossus kowalevskii
miR-4823-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 aaactgg 7
|||||||
Sbjct: 8 aaactgg 2
>hsa-miR-4328 MIMAT0016926 Homo sapiens miR-4328
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 aaactgg 7
|||||||
Sbjct: 7 aaactgg 1
>bmo-miR-3396 MIMAT0015600 Bombyx mori miR-3396
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 aaactgg 7
|||||||
Sbjct: 8 aaactgg 2
>dme-miR-2498-3p MIMAT0012211 Drosophila melanogaster
miR-2498-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 aaactgg 7
|||||||
Sbjct: 1 aaactgg 7
>gga-miR-1631 MIMAT0007502 Gallus gallus miR-1631
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 aaactgg 7
|||||||
Sbjct: 1 aaactgg 7
>oha-miR-193-3p MIMAT0036780 Ophiophagus hannah miR-193-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aactgg 7
||||||
Sbjct: 1 aactgg 6
>oha-miR-145-5p MIMAT0036727 Ophiophagus hannah miR-145-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 aactgg 7
||||||
Sbjct: 8 aactgg 3
>tch-miR-193a-3p MIMAT0036584 Tupaia chinensis miR-193a-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aactgg 7
||||||
Sbjct: 1 aactgg 6
>tch-miR-193b-3p MIMAT0036532 Tupaia chinensis miR-193b-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aactgg 7
||||||
Sbjct: 1 aactgg 6
>chi-miR-193b-3p MIMAT0036028 Capra hircus miR-193b-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aactgg 7
||||||
Sbjct: 1 aactgg 6
>chi-miR-193a MIMAT0036026 Capra hircus miR-193a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aactgg 7
||||||
Sbjct: 1 aactgg 6
>chi-miR-145-5p MIMAT0035967 Capra hircus miR-145-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 aactgg 7
||||||
Sbjct: 8 aactgg 3
>rno-miR-193b-3p MIMAT0035734 Rattus norvegicus miR-193b-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aactgg 7
||||||
Sbjct: 1 aactgg 6
>bdi-miR2275b MIMAT0035534 Brachypodium distachyon miR2275b
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 aaactg 6
||||||
Sbjct: 8 aaactg 3
>efu-miR-193a MIMAT0035142 Eptesicus fuscus miR-193a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aactgg 7
||||||
Sbjct: 1 aactgg 6
>efu-miR-145 MIMAT0035122 Eptesicus fuscus miR-145
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 aactgg 7
||||||
Sbjct: 8 aactgg 3
>efu-miR-9230b MIMAT0034834 Eptesicus fuscus miR-9230b
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 aactgg 7
||||||
Sbjct: 7 aactgg 2
>gra-miR8747 MIMAT0034171 Gossypium raimondii miR8747
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 aactgg 7
||||||
Sbjct: 8 aactgg 3
>sma-miR-8446-3p MIMAT0033603 Schistosoma mansoni miR-8446-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 aactgg 7
||||||
Sbjct: 7 aactgg 2
>str-miR-255-3p MIMAT0033457 Strongyloides ratti miR-255-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 aaactg 6
||||||
Sbjct: 1 aaactg 6
>ppc-miR-8224-3p MIMAT0032891 Pristionchus pacificus miR-8224-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aactgg 7
||||||
Sbjct: 1 aactgg 6
>ppc-miR-8216-5p MIMAT0032862 Pristionchus pacificus miR-8216-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 aactgg 7
||||||
Sbjct: 6 aactgg 1
>ssa-miR-193-3p MIMAT0032446 Salmo salar miR-193-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aactgg 7
||||||
Sbjct: 1 aactgg 6
>ssa-miR-145-5p MIMAT0032369 Salmo salar miR-145-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 aactgg 7
||||||
Sbjct: 8 aactgg 3
>prd-miR-255-3p MIMAT0030761 Panagrellus redivivus miR-255-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 aaactg 6
||||||
Sbjct: 1 aaactg 6
>bta-miR-7859 MIMAT0030434 Bos taurus miR-7859
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 aaactg 6
||||||
Sbjct: 3 aaactg 8
>bdi-miR7766-5p MIMAT0030280 Brachypodium distachyon miR7766-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aactgg 7
||||||
Sbjct: 3 aactgg 8
>crm-miR-255 MIMAT0029922 Caenorhabditis remanei miR-255
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 aaactg 6
||||||
Sbjct: 1 aaactg 6
>mmu-miR-7664-5p MIMAT0029834 Mus musculus miR-7664-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 aaactg 6
||||||
Sbjct: 6 aaactg 1
>cbn-miR-255 MIMAT0029768 Caenorhabditis brenneri miR-255
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 aaactg 6
||||||
Sbjct: 1 aaactg 6
>ipu-miR-145 MIMAT0029422 Ictalurus punctatus miR-145
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 aactgg 7
||||||
Sbjct: 8 aactgg 3
>mdo-miR-193b-3p MIMAT0028653 Monodelphis domestica miR-193b-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aactgg 7
||||||
Sbjct: 1 aactgg 6
>dev-miR-D8-3p MIMAT0028179 Duck enteritis miR-D8-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 aaactg 6
||||||
Sbjct: 8 aaactg 3
>ccr-miR-193a MIMAT0026251 Cyprinus carpio miR-193a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aactgg 7
||||||
Sbjct: 1 aactgg 6
>gga-miR-6710-3p MIMAT0025820 Gallus gallus miR-6710-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 aaactg 6
||||||
Sbjct: 1 aaactg 6
>hsa-miR-548az-3p MIMAT0025457 Homo sapiens miR-548az-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 aaactg 6
||||||
Sbjct: 3 aaactg 8
>mmu-miR-6372 MIMAT0025116 Mus musculus miR-6372
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aactgg 7
||||||
Sbjct: 3 aactgg 8
>mmu-miR-145b MIMAT0025105 Mus musculus miR-145b
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 aactgg 7
||||||
Sbjct: 8 aactgg 3
>hme-miR-6301-3p MIMAT0025005 Heliconius melpomene miR-6301-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 aactgg 7
||||||
Sbjct: 6 aactgg 1
>ggo-miR-4738 MIMAT0024284 Gorilla gorilla miR-4738
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 aaactg 6
||||||
Sbjct: 3 aaactg 8
>ggo-miR-548e MIMAT0024276 Gorilla gorilla miR-548e
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 aaactg 6
||||||
Sbjct: 3 aaactg 8
>ggo-miR-193a MIMAT0024174 Gorilla gorilla miR-193a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aactgg 7
||||||
Sbjct: 1 aactgg 6
>ptr-miR-548e MIMAT0024057 Pan troglodytes miR-548e
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 aaactg 6
||||||
Sbjct: 3 aaactg 8
>cgr-miR-193b-3p MIMAT0023826 Cricetulus griseus miR-193b-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aactgg 7
||||||
Sbjct: 1 aactgg 6
>ame-miR-6006-5p MIMAT0023553 Apis mellifera miR-6006-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aactgg 7
||||||
Sbjct: 3 aactgg 8
>hco-miR-255 MIMAT0023411 Haemonchus contortus miR-255
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 aaactg 6
||||||
Sbjct: 1 aaactg 6
>hco-miR-5898-3p MIMAT0023343 Haemonchus contortus miR-5898-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 aaactg 6
||||||
Sbjct: 6 aaactg 1
>sha-miR-193 MIMAT0022792 Sarcophilus harrisii miR-193
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aactgg 7
||||||
Sbjct: 1 aactgg 6
>ola-miR-193a MIMAT0022528 Oryzias latipes miR-193a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aactgg 7
||||||
Sbjct: 1 aactgg 6
>hsa-miR-548ar-3p MIMAT0022266 Homo sapiens miR-548ar-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 aaactg 6
||||||
Sbjct: 3 aaactg 8
>aca-miR-193-3p MIMAT0021827 Anolis carolinensis miR-193-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aactgg 7
||||||
Sbjct: 1 aactgg 6
>aca-miR-145-5p MIMAT0021773 Anolis carolinensis miR-145-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 aactgg 7
||||||
Sbjct: 8 aactgg 3
>mtr-miR5286b MIMAT0021352 Medicago truncatula miR5286b
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 aaactg 6
||||||
Sbjct: 3 aaactg 8
>hsa-miR-5195-3p MIMAT0021127 Homo sapiens miR-5195-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 aactgg 7
||||||
Sbjct: 8 aactgg 3
>hsa-miR-4738-3p MIMAT0019867 Homo sapiens miR-4738-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 aaactg 6
||||||
Sbjct: 3 aaactg 8
>pma-miR-145-5p MIMAT0019476 Petromyzon marinus miR-145-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 aactgg 7
||||||
Sbjct: 8 aactgg 3
>ppy-miR-193b MIMAT0015789 Pongo pygmaeus miR-193b
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aactgg 7
||||||
Sbjct: 1 aactgg 6
>ppy-miR-193a-3p MIMAT0015788 Pongo pygmaeus miR-193a-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aactgg 7
||||||
Sbjct: 1 aactgg 6
>ghr-miR3476-5p MIMAT0015653 Gossypium hirsutum miR3476-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aactgg 7
||||||
Sbjct: 3 aactgg 8
>mmu-miR-3112-3p MIMAT0014956 Mus musculus miR-3112-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 aaactg 6
||||||
Sbjct: 6 aaactg 1
>tgu-miR-193a-3p MIMAT0014585 Taeniopygia guttata miR-193a-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aactgg 7
||||||
Sbjct: 1 aactgg 6
>ssc-miR-935 MIMAT0013947 Sus scrofa miR-935
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 aactgg 7
||||||
Sbjct: 6 aactgg 1
>ssc-miR-193a-3p MIMAT0013895 Sus scrofa miR-193a-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aactgg 7
||||||
Sbjct: 1 aactgg 6
>eca-miR-145 MIMAT0013064 Equus caballus miR-145
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 aactgg 7
||||||
Sbjct: 8 aactgg 3
>eca-miR-193b MIMAT0013056 Equus caballus miR-193b
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aactgg 7
||||||
Sbjct: 1 aactgg 6
>eca-miR-193a-3p MIMAT0013026 Equus caballus miR-193a-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aactgg 7
||||||
Sbjct: 1 aactgg 6
>rno-miR-935 MIMAT0012845 Rattus norvegicus miR-935
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 aactgg 7
||||||
Sbjct: 6 aactgg 1
>bta-miR-2352 MIMAT0011888 Bos taurus miR-2352
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 aaactg 6
||||||
Sbjct: 1 aaactg 6
>bta-miR-2313-3p MIMAT0011830 Bos taurus miR-2313-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 aactgg 7
||||||
Sbjct: 6 aactgg 1
>bta-miR-2285a MIMAT0011797 Bos taurus miR-2285a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 aaactg 6
||||||
Sbjct: 3 aaactg 8
>zma-miR2275c-3p MIMAT0011772 Zea mays miR2275c-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 aaactg 6
||||||
Sbjct: 8 aaactg 3
>zma-miR2275b-3p MIMAT0011770 Zea mays miR2275b-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 aaactg 6
||||||
Sbjct: 8 aaactg 3
>sme-miR-2157-3p MIMAT0012148 Schmidtea mediterranea miR-2157-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 aaactg 6
||||||
Sbjct: 6 aaactg 1
>mtr-miR2086-5p MIMAT0010026 Medicago truncatula miR2086-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 aactgg 7
||||||
Sbjct: 6 aactgg 1
>cfa-miR-145 MIMAT0009863 Canis familiaris miR-145
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 aactgg 7
||||||
Sbjct: 8 aactgg 3
>sko-miR-193a-3p MIMAT0009635 Saccoglossus kowalevskii
miR-193a-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aactgg 7
||||||
Sbjct: 1 aactgg 6
>cte-miR-193 MIMAT0009533 Capitella teleta miR-193
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aactgg 7
||||||
Sbjct: 1 aactgg 6
>bta-miR-935 MIMAT0009385 Bos taurus miR-935
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 aactgg 7
||||||
Sbjct: 6 aactgg 1
>bta-miR-193b MIMAT0009253 Bos taurus miR-193b
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aactgg 7
||||||
Sbjct: 1 aactgg 6
>ptr-miR-935 MIMAT0008342 Pan troglodytes miR-935
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 aactgg 7
||||||
Sbjct: 6 aactgg 1
>ptr-miR-548f MIMAT0008221 Pan troglodytes miR-548f
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 aaactg 6
||||||
Sbjct: 3 aaactg 8
>ptr-miR-548a MIMAT0008218 Pan troglodytes miR-548a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 aaactg 6
||||||
Sbjct: 3 aaactg 8
>ptr-miR-193b MIMAT0008059 Pan troglodytes miR-193b
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aactgg 7
||||||
Sbjct: 1 aactgg 6
>ptr-miR-193a MIMAT0008058 Pan troglodytes miR-193a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aactgg 7
||||||
Sbjct: 1 aactgg 6
>osa-miR1847.1 MIMAT0007766 Oryza sativa miR1847.1
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 aaactg 6
||||||
Sbjct: 8 aaactg 3
>mml-miR-193b-3p MIMAT0006227 Macaca mulatta miR-193b-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aactgg 7
||||||
Sbjct: 1 aactgg 6
>mml-miR-193a-3p MIMAT0006226 Macaca mulatta miR-193a-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aactgg 7
||||||
Sbjct: 1 aactgg 6
>gga-miR-193a-3p MIMAT0007740 Gallus gallus miR-193a-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aactgg 7
||||||
Sbjct: 1 aactgg 6
>oan-miR-1422q-3p MIMAT0007317 Ornithorhynchus anatinus
miR-1422q-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 aaactg 6
||||||
Sbjct: 3 aaactg 8
>oan-miR-145-5p MIMAT0007141 Ornithorhynchus anatinus miR-145-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 aactgg 7
||||||
Sbjct: 8 aactgg 3
>oan-miR-1342 MIMAT0006873 Ornithorhynchus anatinus miR-1342
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aactgg 7
||||||
Sbjct: 1 aactgg 6
>oan-miR-193-3p MIMAT0006821 Ornithorhynchus anatinus miR-193-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aactgg 7
||||||
Sbjct: 1 aactgg 6
>hsa-miR-548f-3p MIMAT0005895 Homo sapiens miR-548f-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 aaactg 6
||||||
Sbjct: 3 aaactg 8
>hsa-miR-1243 MIMAT0005894 Homo sapiens miR-1243
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aactgg 7
||||||
Sbjct: 1 aactgg 6
>hsa-miR-548e-3p MIMAT0005874 Homo sapiens miR-548e-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 aaactg 6
||||||
Sbjct: 3 aaactg 8
>ddi-miR-1177 MIMAT0005532 Dictyostelium discoideum miR-1177
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 aactgg 7
||||||
Sbjct: 6 aactgg 1
>hsa-miR-935 MIMAT0004978 Homo sapiens miR-935
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 aactgg 7
||||||
Sbjct: 6 aactgg 1
>mmu-miR-193b-3p MIMAT0004859 Mus musculus miR-193b-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aactgg 7
||||||
Sbjct: 1 aactgg 6
>cbr-miR-255 MIMAT0004297 Caenorhabditis briggsae miR-255
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 aaactg 6
||||||
Sbjct: 1 aaactg 6
>ath-miR837-5p MIMAT0004258 Arabidopsis thaliana miR837-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 aaactg 6
||||||
Sbjct: 8 aaactg 3
>mdo-miR-193a-3p MIMAT0004123 Monodelphis domestica miR-193a-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aactgg 7
||||||
Sbjct: 1 aactgg 6
>mdo-miR-145-5p MIMAT0004116 Monodelphis domestica miR-145-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 aactgg 7
||||||
Sbjct: 8 aactgg 3
>sme-miR-61a-5p MIMAT0012105 Schmidtea mediterranea miR-61a-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 aaactg 6
||||||
Sbjct: 6 aaactg 1
>bta-miR-193a-3p MIMAT0003795 Bos taurus miR-193a-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aactgg 7
||||||
Sbjct: 1 aactgg 6
>xtr-miR-145 MIMAT0003688 Xenopus tropicalis miR-145
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 aactgg 7
||||||
Sbjct: 8 aactgg 3
>xtr-miR-193 MIMAT0003616 Xenopus tropicalis miR-193
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aactgg 7
||||||
Sbjct: 1 aactgg 6
>dre-miR-723-5p MIMAT0003750 Danio rerio miR-723-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 aaactg 6
||||||
Sbjct: 8 aaactg 3
>bta-miR-145 MIMAT0003542 Bos taurus miR-145
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 aactgg 7
||||||
Sbjct: 8 aactgg 3
>gga-miR-193b-3p MIMAT0003353 Gallus gallus miR-193b-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aactgg 7
||||||
Sbjct: 1 aactgg 6
>hsa-miR-548a-3p MIMAT0003251 Homo sapiens miR-548a-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 aaactg 6
||||||
Sbjct: 3 aaactg 8
>tni-miR-193 MIMAT0002970 Tetraodon nigroviridis miR-193
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aactgg 7
||||||
Sbjct: 1 aactgg 6
>fru-miR-193 MIMAT0002969 Fugu rubripes miR-193
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aactgg 7
||||||
Sbjct: 1 aactgg 6
>hsa-miR-193b-3p MIMAT0002819 Homo sapiens miR-193b-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aactgg 7
||||||
Sbjct: 1 aactgg 6
>mne-miR-145 MIMAT0002270 Macaca nemestrina miR-145
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 aactgg 7
||||||
Sbjct: 8 aactgg 3
>ppy-miR-145 MIMAT0002269 Pongo pygmaeus miR-145
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 aactgg 7
||||||
Sbjct: 8 aactgg 3
>ggo-miR-145 MIMAT0002268 Gorilla gorilla miR-145
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 aactgg 7
||||||
Sbjct: 8 aactgg 3
>ptr-miR-145 MIMAT0002267 Pan troglodytes miR-145
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 aactgg 7
||||||
Sbjct: 8 aactgg 3
>mml-miR-145-5p MIMAT0002266 Macaca mulatta miR-145-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 aactgg 7
||||||
Sbjct: 8 aactgg 3
>ssc-miR-145-5p MIMAT0002123 Sus scrofa miR-145-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 aactgg 7
||||||
Sbjct: 8 aactgg 3
>dre-miR-193b-3p MIMAT0001857 Danio rerio miR-193b-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aactgg 7
||||||
Sbjct: 1 aactgg 6
>dre-miR-193a-3p MIMAT0001856 Danio rerio miR-193a-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aactgg 7
||||||
Sbjct: 1 aactgg 6
>dre-miR-145-5p MIMAT0001842 Danio rerio miR-145-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 aactgg 7
||||||
Sbjct: 8 aactgg 3
>mghv-miR-M1-6-3p MIMAT0001569 Mouse gammaherpesvirus
miR-M1-6-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 aaactg 6
||||||
Sbjct: 3 aaactg 8
>ath-miR401 MIMAT0001002 Arabidopsis thaliana miR401
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 aaactg 6
||||||
Sbjct: 3 aaactg 8
>rno-miR-193a-3p MIMAT0000868 Rattus norvegicus miR-193a-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aactgg 7
||||||
Sbjct: 1 aactgg 6
>rno-miR-145-5p MIMAT0000851 Rattus norvegicus miR-145-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 aactgg 7
||||||
Sbjct: 8 aactgg 3
>hsa-miR-193a-3p MIMAT0000459 Homo sapiens miR-193a-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aactgg 7
||||||
Sbjct: 1 aactgg 6
>hsa-miR-145-5p MIMAT0000437 Homo sapiens miR-145-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 aactgg 7
||||||
Sbjct: 8 aactgg 3
>cel-miR-255-3p MIMAT0004216 Caenorhabditis elegans miR-255-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 aaactg 6
||||||
Sbjct: 1 aaactg 6
>mmu-miR-193a-3p MIMAT0000223 Mus musculus miR-193a-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aactgg 7
||||||
Sbjct: 1 aactgg 6
>mmu-miR-145a-5p MIMAT0000157 Mus musculus miR-145a-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 aactgg 7
||||||
Sbjct: 8 aactgg 3
>cel-miR-60-5p MIMAT0015102 Caenorhabditis elegans miR-60-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 aactgg 7
||||||
Sbjct: 1 aactgg 6
>cel-miR-49-5p MIMAT0020309 Caenorhabditis elegans miR-49-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 aaactg 6
||||||
Sbjct: 8 aaactg 3
Database: /home/users/abid/BLAST/MIRBASE
Posted date: Sep 2, 2014 3:58 PM
Number of letters in database: 286,624
Number of sequences in database: 35,828
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 35828
Number of Hits to DB: 164
Number of extensions: 154
Number of successful extensions: 138
Number of sequences better than 100.0: 138
Number of HSP's gapped: 138
Number of HSP's successfully gapped: 138
Length of query: 7
Length of database: 286,624
Length adjustment: 4
Effective length of query: 3
Effective length of database: 143,312
Effective search space: 429936
Effective search space used: 429936
X1: 5 ( 9.9 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 5 (10.4 bits)
S2: 6 (12.4 bits)
