BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= sgiv-miR-5
         (7 letters)

Database: /home/users/abid/BLAST/MIRBASE 
           35,828 sequences; 286,624 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ata-miR5168-5p MIMAT0037130 Aegilops tauschii miR5168-5p               14      20
eca-miR-9006 MIMAT0034546 Equus caballus miR-9006                      14      20
bma-miR-5847 MIMAT0026345 Brugia malayi miR-5847                       14      20
mtr-miR5277 MIMAT0021316 Medicago truncatula miR5277                   14      20
cin-miR-4064-3p MIMAT0016617 Ciona intestinalis miR-4064-3p            14      20
bta-miR-2325c MIMAT0011934 Bos taurus miR-2325c                        14      20
bta-miR-2325b MIMAT0011927 Bos taurus miR-2325b                        14      20
gga-miR-1814 MIMAT0007513 Gallus gallus miR-1814                       14      20
oha-miR-21-3p MIMAT0036825 Ophiophagus hannah miR-21-3p                12      80
bra-miR9567-5p MIMAT0035693 Brassica rapa miR9567-5p                   12      80
gsa-miR-67-3p MIMAT0035263 Gyrodactylus salaris miR-67-3p              12      80
sma-miR-8448-5p MIMAT0033606 Schistosoma mansoni miR-8448-5p           12      80
ppc-miR-8335-3p MIMAT0033215 Pristionchus pacificus miR-8335-3p        12      80
ppc-miR-8233-5p MIMAT0032918 Pristionchus pacificus miR-8233-5p        12      80
ssa-miR-338a-4-5p MIMAT0032617 Salmo salar miR-338a-4-5p               12      80
bma-miR-307 MIMAT0031748 Brugia malayi miR-307                         12      80
bbe-miR-34b-3p MIMAT0031672 Branchiostoma belcheri miR-34b-3p          12      80
prd-miR-67-3p MIMAT0030755 Panagrellus redivivus miR-67-3p             12      80
bdi-miR7745-3p MIMAT0030231 Brachypodium distachyon miR7745-3p         12      80
cbn-miR-67 MIMAT0029775 Caenorhabditis brenneri miR-67                 12      80
mdo-miR-7248-3p MIMAT0028463 Monodelphis domestica miR-7248-3p         12      80
gga-miR-6568-3p MIMAT0025644 Gallus gallus miR-6568-3p                 12      80
gga-miR-6548-5p MIMAT0025601 Gallus gallus miR-6548-5p                 12      80
hme-miR-3327 MIMAT0024981 Heliconius melpomene miR-3327                12      80
mse-miR-307 MIMAT0024448 Manduca sexta miR-307                         12      80
hco-miR-307 MIMAT0023407 Haemonchus contortus miR-307                  12      80
ola-miR-338-5p MIMAT0022579 Oryzias latipes miR-338-5p                 12      80
tur-miR-307-3p MIMAT0023069 Tetranychus urticae miR-307-3p             12      80
asu-miR-67-3p MIMAT0021524 Ascaris suum miR-67-3p                      12      80
hsa-miR-3529-3p MIMAT0022741 Homo sapiens miR-3529-3p                  12      80
pma-miR-10b-3p MIMAT0019377 Petromyzon marinus miR-10b-3p              12      80
mmu-miR-3970 MIMAT0019355 Mus musculus miR-3970                        12      80
gma-miR1520p MIMAT0018322 Glycine max miR1520p                         12      80
tca-miR-3887-5p MIMAT0018872 Tribolium castaneum miR-3887-5p           12      80
ame-miR-307 MIMAT0018509 Apis mellifera miR-307                        12      80
ssc-miR-652 MIMAT0017964 Sus scrofa miR-652                            12      80
ssc-miR-382 MIMAT0017956 Sus scrofa miR-382                            12      80
cin-miR-4101-3p MIMAT0016686 Ciona intestinalis miR-4101-3p            12      80
sja-miR-307 MIMAT0016270 Schistosoma japonicum miR-307                 12      80
nvi-miR-307 MIMAT0015694 Nasonia vitripennis miR-307                   12      80
aly-miR822-3p MIMAT0017600 Arabidopsis lyrata miR822-3p                12      80
bmo-miR-3327-5p MIMAT0015514 Bombyx mori miR-3327-5p                   12      80
api-miR-307 MIMAT0014729 Acyrthosiphon pisum miR-307                   12      80
tgu-miR-21-3p MIMAT0014636 Taeniopygia guttata miR-21-3p               12      80
isc-miR-307 MIMAT0012701 Ixodes scapularis miR-307                     12      80
dpu-miR-307 MIMAT0012665 Daphnia pulex miR-307                         12      80
bta-miR-2304 MIMAT0011816 Bos taurus miR-2304                          12      80
ppc-miR-67 MIMAT0011713 Pristionchus pacificus miR-67                  12      80
crm-miR-67-3p MIMAT0011596 Caenorhabditis remanei miR-67-3p            12      80
sme-miR-2173-5p MIMAT0012164 Schmidtea mediterranea miR-2173-5p        12      80
sme-miR-2168-3p MIMAT0012160 Schmidtea mediterranea miR-2168-3p        12      80
lmi-miR-307-3p MIMAT0010137 Locusta migratoria miR-307-3p              12      80
bfl-miR-34b-3p MIMAT0010002 Branchiostoma floridae miR-34b-3p          12      80
cte-miR-67 MIMAT0009675 Capitella teleta miR-67                        12      80
lgi-miR-67 MIMAT0009570 Lottia gigantea miR-67                         12      80
dya-miR-307 MIMAT0009054 Drosophila yakuba miR-307                     12      80
dwi-miR-307 MIMAT0009031 Drosophila willistoni miR-307                 12      80
dvi-miR-307 MIMAT0008953 Drosophila virilis miR-307                    12      80
dsi-miR-307 MIMAT0008884 Drosophila simulans miR-307                   12      80
dse-miR-307 MIMAT0008811 Drosophila sechellia miR-307                  12      80
dpe-miR-307 MIMAT0008697 Drosophila persimilis miR-307                 12      80
dmo-miR-307 MIMAT0008665 Drosophila mojavensis miR-307                 12      80
dgr-miR-307 MIMAT0008562 Drosophila grimshawi miR-307                  12      80
der-miR-307 MIMAT0008497 Drosophila erecta miR-307                     12      80
dan-miR-307 MIMAT0008434 Drosophila ananassae miR-307                  12      80
tca-miR-307-3p MIMAT0008389 Tribolium castaneum miR-307-3p             12      80
gma-miR1510a-3p MIMAT0007368 Glycine max miR1510a-3p                   12      80
rno-miR-652-5p MIMAT0017321 Rattus norvegicus miR-652-5p               12      80
rno-miR-196c-3p MIMAT0017299 Rattus norvegicus miR-196c-3p             12      80
ppt-miR1074 MIMAT0005204 Physcomitrella patens miR1074                 12      80
sme-miR-67-3p MIMAT0004014 Schmidtea mediterranea miR-67-3p            12      80
bmo-miR-307-3p MIMAT0004208 Bombyx mori miR-307-3p                     12      80
mmu-miR-374b-3p MIMAT0003728 Mus musculus miR-374b-3p                  12      80
aga-miR-307 MIMAT0001519 Anopheles gambiae miR-307                     12      80
dps-miR-307a MIMAT0001257 Drosophila pseudoobscura miR-307a            12      80
cbr-miR-67 MIMAT0000480 Caenorhabditis briggsae miR-67                 12      80
dme-miR-307a-3p MIMAT0000398 Drosophila melanogaster miR-307a-3p       12      80
cel-miR-67-3p MIMAT0000039 Caenorhabditis elegans miR-67-3p            12      80
>ata-miR5168-5p MIMAT0037130 Aegilops tauschii miR5168-5p
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Minus

                
Query: 1 aacaacc 7
         |||||||
Sbjct: 8 aacaacc 2
>eca-miR-9006 MIMAT0034546 Equus caballus miR-9006
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Minus

                
Query: 1 aacaacc 7
         |||||||
Sbjct: 7 aacaacc 1
>bma-miR-5847 MIMAT0026345 Brugia malayi miR-5847
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 aacaacc 7
         |||||||
Sbjct: 1 aacaacc 7
>mtr-miR5277 MIMAT0021316 Medicago truncatula miR5277
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Minus

                
Query: 1 aacaacc 7
         |||||||
Sbjct: 8 aacaacc 2
>cin-miR-4064-3p MIMAT0016617 Ciona intestinalis miR-4064-3p
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 aacaacc 7
         |||||||
Sbjct: 1 aacaacc 7
>bta-miR-2325c MIMAT0011934 Bos taurus miR-2325c
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Minus

                
Query: 1 aacaacc 7
         |||||||
Sbjct: 7 aacaacc 1
>bta-miR-2325b MIMAT0011927 Bos taurus miR-2325b
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Minus

                
Query: 1 aacaacc 7
         |||||||
Sbjct: 8 aacaacc 2
>gga-miR-1814 MIMAT0007513 Gallus gallus miR-1814
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Minus

                
Query: 1 aacaacc 7
         |||||||
Sbjct: 8 aacaacc 2
>oha-miR-21-3p MIMAT0036825 Ophiophagus hannah miR-21-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 aacaac 6
         ||||||
Sbjct: 1 aacaac 6
>bra-miR9567-5p MIMAT0035693 Brassica rapa miR9567-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 aacaac 6
         ||||||
Sbjct: 3 aacaac 8
>gsa-miR-67-3p MIMAT0035263 Gyrodactylus salaris miR-67-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 acaacc 7
         ||||||
Sbjct: 3 acaacc 8
>sma-miR-8448-5p MIMAT0033606 Schistosoma mansoni miR-8448-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 aacaac 6
         ||||||
Sbjct: 3 aacaac 8
>ppc-miR-8335-3p MIMAT0033215 Pristionchus pacificus miR-8335-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 aacaac 6
         ||||||
Sbjct: 6 aacaac 1
>ppc-miR-8233-5p MIMAT0032918 Pristionchus pacificus miR-8233-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 acaacc 7
         ||||||
Sbjct: 8 acaacc 3
>ssa-miR-338a-4-5p MIMAT0032617 Salmo salar miR-338a-4-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 aacaac 6
         ||||||
Sbjct: 1 aacaac 6
>bma-miR-307 MIMAT0031748 Brugia malayi miR-307
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 acaacc 7
         ||||||
Sbjct: 3 acaacc 8
>bbe-miR-34b-3p MIMAT0031672 Branchiostoma belcheri miR-34b-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 aacaac 6
         ||||||
Sbjct: 1 aacaac 6
>prd-miR-67-3p MIMAT0030755 Panagrellus redivivus miR-67-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 acaacc 7
         ||||||
Sbjct: 3 acaacc 8
>bdi-miR7745-3p MIMAT0030231 Brachypodium distachyon miR7745-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 aacaac 6
         ||||||
Sbjct: 8 aacaac 3
>cbn-miR-67 MIMAT0029775 Caenorhabditis brenneri miR-67
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 acaacc 7
         ||||||
Sbjct: 3 acaacc 8
>mdo-miR-7248-3p MIMAT0028463 Monodelphis domestica miR-7248-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 acaacc 7
         ||||||
Sbjct: 1 acaacc 6
>gga-miR-6568-3p MIMAT0025644 Gallus gallus miR-6568-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 acaacc 7
         ||||||
Sbjct: 1 acaacc 6
>gga-miR-6548-5p MIMAT0025601 Gallus gallus miR-6548-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 aacaac 6
         ||||||
Sbjct: 1 aacaac 6
>hme-miR-3327 MIMAT0024981 Heliconius melpomene miR-3327
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 aacaac 6
         ||||||
Sbjct: 1 aacaac 6
>mse-miR-307 MIMAT0024448 Manduca sexta miR-307
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 acaacc 7
         ||||||
Sbjct: 3 acaacc 8
>hco-miR-307 MIMAT0023407 Haemonchus contortus miR-307
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 acaacc 7
         ||||||
Sbjct: 3 acaacc 8
>ola-miR-338-5p MIMAT0022579 Oryzias latipes miR-338-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 aacaac 6
         ||||||
Sbjct: 1 aacaac 6
>tur-miR-307-3p MIMAT0023069 Tetranychus urticae miR-307-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 acaacc 7
         ||||||
Sbjct: 3 acaacc 8
>asu-miR-67-3p MIMAT0021524 Ascaris suum miR-67-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 acaacc 7
         ||||||
Sbjct: 3 acaacc 8
>hsa-miR-3529-3p MIMAT0022741 Homo sapiens miR-3529-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 aacaac 6
         ||||||
Sbjct: 1 aacaac 6
>pma-miR-10b-3p MIMAT0019377 Petromyzon marinus miR-10b-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 acaacc 7
         ||||||
Sbjct: 8 acaacc 3
>mmu-miR-3970 MIMAT0019355 Mus musculus miR-3970
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 acaacc 7
         ||||||
Sbjct: 8 acaacc 3
>gma-miR1520p MIMAT0018322 Glycine max miR1520p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 aacaac 6
         ||||||
Sbjct: 8 aacaac 3
>tca-miR-3887-5p MIMAT0018872 Tribolium castaneum miR-3887-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 acaacc 7
         ||||||
Sbjct: 8 acaacc 3
>ame-miR-307 MIMAT0018509 Apis mellifera miR-307
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 acaacc 7
         ||||||
Sbjct: 3 acaacc 8
>ssc-miR-652 MIMAT0017964 Sus scrofa miR-652
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 acaacc 7
         ||||||
Sbjct: 1 acaacc 6
>ssc-miR-382 MIMAT0017956 Sus scrofa miR-382
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 aacaac 6
         ||||||
Sbjct: 8 aacaac 3
>cin-miR-4101-3p MIMAT0016686 Ciona intestinalis miR-4101-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 acaacc 7
         ||||||
Sbjct: 8 acaacc 3
>sja-miR-307 MIMAT0016270 Schistosoma japonicum miR-307
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 acaacc 7
         ||||||
Sbjct: 3 acaacc 8
>nvi-miR-307 MIMAT0015694 Nasonia vitripennis miR-307
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 acaacc 7
         ||||||
Sbjct: 3 acaacc 8
>aly-miR822-3p MIMAT0017600 Arabidopsis lyrata miR822-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 aacaac 6
         ||||||
Sbjct: 3 aacaac 8
>bmo-miR-3327-5p MIMAT0015514 Bombyx mori miR-3327-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 aacaac 6
         ||||||
Sbjct: 1 aacaac 6
>api-miR-307 MIMAT0014729 Acyrthosiphon pisum miR-307
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 acaacc 7
         ||||||
Sbjct: 3 acaacc 8
>tgu-miR-21-3p MIMAT0014636 Taeniopygia guttata miR-21-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 aacaac 6
         ||||||
Sbjct: 1 aacaac 6
>isc-miR-307 MIMAT0012701 Ixodes scapularis miR-307
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 acaacc 7
         ||||||
Sbjct: 3 acaacc 8
>dpu-miR-307 MIMAT0012665 Daphnia pulex miR-307
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 acaacc 7
         ||||||
Sbjct: 3 acaacc 8
>bta-miR-2304 MIMAT0011816 Bos taurus miR-2304
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 acaacc 7
         ||||||
Sbjct: 6 acaacc 1
>ppc-miR-67 MIMAT0011713 Pristionchus pacificus miR-67
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 acaacc 7
         ||||||
Sbjct: 3 acaacc 8
>crm-miR-67-3p MIMAT0011596 Caenorhabditis remanei miR-67-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 acaacc 7
         ||||||
Sbjct: 3 acaacc 8
>sme-miR-2173-5p MIMAT0012164 Schmidtea mediterranea miR-2173-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 aacaac 6
         ||||||
Sbjct: 1 aacaac 6
>sme-miR-2168-3p MIMAT0012160 Schmidtea mediterranea miR-2168-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 acaacc 7
         ||||||
Sbjct: 3 acaacc 8
>lmi-miR-307-3p MIMAT0010137 Locusta migratoria miR-307-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 acaacc 7
         ||||||
Sbjct: 3 acaacc 8
>bfl-miR-34b-3p MIMAT0010002 Branchiostoma floridae miR-34b-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 aacaac 6
         ||||||
Sbjct: 1 aacaac 6
>cte-miR-67 MIMAT0009675 Capitella teleta miR-67
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 acaacc 7
         ||||||
Sbjct: 3 acaacc 8
>lgi-miR-67 MIMAT0009570 Lottia gigantea miR-67
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 acaacc 7
         ||||||
Sbjct: 3 acaacc 8
>dya-miR-307 MIMAT0009054 Drosophila yakuba miR-307
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 acaacc 7
         ||||||
Sbjct: 3 acaacc 8
>dwi-miR-307 MIMAT0009031 Drosophila willistoni miR-307
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 acaacc 7
         ||||||
Sbjct: 3 acaacc 8
>dvi-miR-307 MIMAT0008953 Drosophila virilis miR-307
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 acaacc 7
         ||||||
Sbjct: 3 acaacc 8
>dsi-miR-307 MIMAT0008884 Drosophila simulans miR-307
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 acaacc 7
         ||||||
Sbjct: 3 acaacc 8
>dse-miR-307 MIMAT0008811 Drosophila sechellia miR-307
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 acaacc 7
         ||||||
Sbjct: 3 acaacc 8
>dpe-miR-307 MIMAT0008697 Drosophila persimilis miR-307
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 acaacc 7
         ||||||
Sbjct: 3 acaacc 8
>dmo-miR-307 MIMAT0008665 Drosophila mojavensis miR-307
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 acaacc 7
         ||||||
Sbjct: 3 acaacc 8
>dgr-miR-307 MIMAT0008562 Drosophila grimshawi miR-307
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 acaacc 7
         ||||||
Sbjct: 3 acaacc 8
>der-miR-307 MIMAT0008497 Drosophila erecta miR-307
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 acaacc 7
         ||||||
Sbjct: 3 acaacc 8
>dan-miR-307 MIMAT0008434 Drosophila ananassae miR-307
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 acaacc 7
         ||||||
Sbjct: 3 acaacc 8
>tca-miR-307-3p MIMAT0008389 Tribolium castaneum miR-307-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 acaacc 7
         ||||||
Sbjct: 3 acaacc 8
>gma-miR1510a-3p MIMAT0007368 Glycine max miR1510a-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 aacaac 6
         ||||||
Sbjct: 8 aacaac 3
>rno-miR-652-5p MIMAT0017321 Rattus norvegicus miR-652-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 acaacc 7
         ||||||
Sbjct: 1 acaacc 6
>rno-miR-196c-3p MIMAT0017299 Rattus norvegicus miR-196c-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 aacaac 6
         ||||||
Sbjct: 3 aacaac 8
>ppt-miR1074 MIMAT0005204 Physcomitrella patens miR1074
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 acaacc 7
         ||||||
Sbjct: 8 acaacc 3
>sme-miR-67-3p MIMAT0004014 Schmidtea mediterranea miR-67-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 acaacc 7
         ||||||
Sbjct: 3 acaacc 8
>bmo-miR-307-3p MIMAT0004208 Bombyx mori miR-307-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 acaacc 7
         ||||||
Sbjct: 3 acaacc 8
>mmu-miR-374b-3p MIMAT0003728 Mus musculus miR-374b-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 acaacc 7
         ||||||
Sbjct: 6 acaacc 1
>aga-miR-307 MIMAT0001519 Anopheles gambiae miR-307
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 acaacc 7
         ||||||
Sbjct: 3 acaacc 8
>dps-miR-307a MIMAT0001257 Drosophila pseudoobscura miR-307a
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 acaacc 7
         ||||||
Sbjct: 3 acaacc 8
>cbr-miR-67 MIMAT0000480 Caenorhabditis briggsae miR-67
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 acaacc 7
         ||||||
Sbjct: 3 acaacc 8
>dme-miR-307a-3p MIMAT0000398 Drosophila melanogaster
         miR-307a-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 acaacc 7
         ||||||
Sbjct: 3 acaacc 8
>cel-miR-67-3p MIMAT0000039 Caenorhabditis elegans miR-67-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 acaacc 7
         ||||||
Sbjct: 3 acaacc 8
  Database: /home/users/abid/BLAST/MIRBASE
    Posted date:  Sep 2, 2014  3:58 PM
  Number of letters in database: 286,624
  Number of sequences in database:  35,828
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 35828
Number of Hits to DB: 127
Number of extensions: 119
Number of successful extensions: 78
Number of sequences better than 100.0: 78
Number of HSP's gapped: 78
Number of HSP's successfully gapped: 78
Length of query: 7
Length of database: 286,624
Length adjustment: 4
Effective length of query: 3
Effective length of database: 143,312
Effective search space:   429936
Effective search space used:   429936
X1: 5 ( 9.9 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 5 (10.4 bits)
S2: 6 (12.4 bits)