BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ttv-twh-t2
(7 letters)
Database: /home/users/abid/BLAST/MIRBASE
35,828 sequences; 286,624 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
chi-miR-224-5p MIMAT0036073 Capra hircus miR-224-5p 14 20
hsa-miR-6820-3p MIMAT0027541 Homo sapiens miR-6820-3p 14 20
hsa-miR-3164 MIMAT0015038 Homo sapiens miR-3164 14 20
eca-miR-224 MIMAT0013206 Equus caballus miR-224 14 20
bta-miR-224 MIMAT0009271 Bos taurus miR-224 14 20
cfa-miR-224 MIMAT0006744 Canis familiaris miR-224 14 20
rno-miR-224-5p MIMAT0003119 Rattus norvegicus miR-224-5p 14 20
ppa-miR-224 MIMAT0002599 Pan paniscus miR-224 14 20
mne-miR-224 MIMAT0002598 Macaca nemestrina miR-224 14 20
ppy-miR-224 MIMAT0002597 Pongo pygmaeus miR-224 14 20
ggo-miR-224 MIMAT0002596 Gorilla gorilla miR-224 14 20
ptr-miR-224 MIMAT0002595 Pan troglodytes miR-224 14 20
mml-miR-224-5p MIMAT0002594 Macaca mulatta miR-224-5p 14 20
ssc-miR-224 MIMAT0002132 Sus scrofa miR-224 14 20
mmu-miR-224-5p MIMAT0000671 Mus musculus miR-224-5p 14 20
hsa-miR-224-5p MIMAT0000281 Homo sapiens miR-224-5p 14 20
oha-miR-1677b-3p MIMAT0036750 Ophiophagus hannah miR-1677b-3p 12 80
chi-miR-134 MIMAT0035951 Capra hircus miR-134 12 80
chi-miR-125b-3p MIMAT0035926 Capra hircus miR-125b-3p 12 80
tae-miR9671-5p MIMAT0035787 Triticum aestivum miR9671-5p 12 80
dvi-miR-9548-3p MIMAT0035639 Drosophila virilis miR-9548-3p 12 80
efu-miR-9202 MIMAT0034788 Eptesicus fuscus miR-9202 12 80
cfa-miR-8880 MIMAT0034380 Canis familiaris miR-8880 12 80
cfa-miR-8833 MIMAT0034326 Canis familiaris miR-8833 12 80
stu-miR8050-3p MIMAT0030976 Solanum tuberosum miR8050-3p 12 80
osa-miR7692-3p MIMAT0029956 Oryza sativa miR7692-3p 12 80
tgu-miR-7643-5p MIMAT0029786 Taeniopygia guttata miR-7643-5p 12 80
gga-miR-7439-5p MIMAT0029032 Gallus gallus miR-7439-5p 12 80
mdo-miR-7388a-3p MIMAT0028869 Monodelphis domestica miR-7388a-3p 12 80
mdo-miR-7373c-3p MIMAT0028805 Monodelphis domestica miR-7373c-3p 12 80
mmu-miR-7235-3p MIMAT0028439 Mus musculus miR-7235-3p 12 80
mml-miR-6505-3p MIMAT0028249 Macaca mulatta miR-6505-3p 12 80
mmu-miR-7079-3p MIMAT0028065 Mus musculus miR-7079-3p 12 80
mmu-miR-6980-3p MIMAT0027863 Mus musculus miR-6980-3p 12 80
gga-miR-6688-3p MIMAT0025794 Gallus gallus miR-6688-3p 12 80
hsa-miR-6505-3p MIMAT0025467 Homo sapiens miR-6505-3p 12 80
cgr-miR-134 MIMAT0023760 Cricetulus griseus miR-134 12 80
hco-miR-5989 MIMAT0023505 Haemonchus contortus miR-5989 12 80
hco-miR-5914 MIMAT0023383 Haemonchus contortus miR-5914 12 80
mmu-miR-344i MIMAT0022503 Mus musculus miR-344i 12 80
mmu-miR-5619-5p MIMAT0022365 Mus musculus miR-5619-5p 12 80
aca-miR-5398-3p MIMAT0022007 Anolis carolinensis miR-5398-3p 12 80
aca-miR-1677b-3p MIMAT0021798 Anolis carolinensis miR-1677b-3p 12 80
aca-miR-1677a MIMAT0021796 Anolis carolinensis miR-1677a 12 80
mtr-miR5255 MIMAT0021253 Medicago truncatula miR5255 12 80
hsa-miR-4704-3p MIMAT0019804 Homo sapiens miR-4704-3p 12 80
oar-miR-134-5p MIMAT0019308 Ovis aries miR-134-5p 12 80
hsa-miR-4439 MIMAT0018957 Homo sapiens miR-4439 12 80
ame-miR-3743 MIMAT0018612 Apis mellifera miR-3743 12 80
vvi-miR3639-5p MIMAT0018051 Vitis vinifera miR3639-5p 12 80
rno-miR-3583-3p MIMAT0017874 Rattus norvegicus miR-3583-3p 12 80
bmo-miR-3388-5p MIMAT0015587 Bombyx mori miR-3388-5p 12 80
hsa-miR-3118 MIMAT0014980 Homo sapiens miR-3118 12 80
tgu-miR-125-1-3p MIMAT0014628 Taeniopygia guttata miR-125-1-3p 12 80
tgu-miR-1803-3p MIMAT0014472 Taeniopygia guttata miR-1803-3p 12 80
tgu-miR-1784-3p MIMAT0014457 Taeniopygia guttata miR-1784-3p 12 80
eca-miR-134 MIMAT0013127 Equus caballus miR-134 12 80
mdo-miR-301-5p MIMAT0026932 Monodelphis domestica miR-301-5p 12 80
dps-miR-2562-5p MIMAT0012386 Drosophila pseudoobscura miR-2562-5p 12 80
dps-miR-2549-5p MIMAT0012358 Drosophila pseudoobscura miR-2549-5p 12 80
bta-miR-2380 MIMAT0011928 Bos taurus miR-2380 12 80
sbi-miR821e MIMAT0011389 Sorghum bicolor miR821e 12 80
sbi-miR821d MIMAT0011388 Sorghum bicolor miR821d 12 80
sbi-miR821c MIMAT0011387 Sorghum bicolor miR821c 12 80
sbi-miR821a MIMAT0011385 Sorghum bicolor miR821a 12 80
cfa-miR-134 MIMAT0009883 Canis familiaris miR-134 12 80
bta-miR-134 MIMAT0009227 Bos taurus miR-134 12 80
dya-miR-284 MIMAT0009087 Drosophila yakuba miR-284 12 80
dwi-miR-284 MIMAT0008993 Drosophila willistoni miR-284 12 80
dvi-miR-284-3p MIMAT0008977 Drosophila virilis miR-284-3p 12 80
dsi-miR-284 MIMAT0008902 Drosophila simulans miR-284 12 80
dse-miR-284 MIMAT0008798 Drosophila sechellia miR-284 12 80
dpe-miR-284 MIMAT0008708 Drosophila persimilis miR-284 12 80
dmo-miR-284 MIMAT0008628 Drosophila mojavensis miR-284 12 80
dgr-miR-284 MIMAT0008611 Drosophila grimshawi miR-284 12 80
der-miR-284 MIMAT0008513 Drosophila erecta miR-284 12 80
dan-miR-284 MIMAT0008415 Drosophila ananassae miR-284 12 80
ptr-miR-134 MIMAT0008031 Pan troglodytes miR-134 12 80
mml-miR-301a-5p MIMAT0026850 Macaca mulatta miR-301a-5p 12 80
mml-miR-134-5p MIMAT0006190 Macaca mulatta miR-134-5p 12 80
gga-miR-1803 MIMAT0007720 Gallus gallus miR-1803 12 80
gga-miR-1802 MIMAT0007718 Gallus gallus miR-1802 12 80
gga-miR-1677-3p MIMAT0007563 Gallus gallus miR-1677-3p 12 80
gga-miR-1574-5p MIMAT0007434 Gallus gallus miR-1574-5p 12 80
mcmv-miR-m108-2-3p MIMAT0005561 Mouse cytomegalovirus miR-m108-2-3p 12 80
ppt-miR1032 MIMAT0005135 Physcomitrella patens miR1032 12 80
ath-miR864-3p MIMAT0004312 Arabidopsis thaliana miR864-3p 12 80
osa-miR821c MIMAT0004084 Oryza sativa miR821c 12 80
osa-miR821b MIMAT0004083 Oryza sativa miR821b 12 80
osa-miR821a MIMAT0004082 Oryza sativa miR821a 12 80
ppa-miR-134 MIMAT0002291 Pan paniscus miR-134 12 80
mne-miR-134 MIMAT0002290 Macaca nemestrina miR-134 12 80
ppy-miR-134 MIMAT0002289 Pongo pygmaeus miR-134 12 80
ggo-miR-134 MIMAT0002288 Gorilla gorilla miR-134 12 80
mml-miR-125b-2-3p MIMAT0031073 Macaca mulatta miR-125b-2-3p 12 80
dps-miR-284 MIMAT0001248 Drosophila pseudoobscura miR-284 12 80
gga-miR-125b-3p MIMAT0026493 Gallus gallus miR-125b-3p 12 80
rno-miR-134-5p MIMAT0000840 Rattus norvegicus miR-134-5p 12 80
rno-miR-125b-2-3p MIMAT0026467 Rattus norvegicus miR-125b-2-3p 12 80
hsa-miR-134-5p MIMAT0000447 Homo sapiens miR-134-5p 12 80
mmu-miR-134-5p MIMAT0000146 Mus musculus miR-134-5p 12 80
mmu-miR-125b-2-3p MIMAT0004529 Mus musculus miR-125b-2-3p 12 80
>chi-miR-224-5p MIMAT0036073 Capra hircus miR-224-5p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 aagtcac 7
|||||||
Sbjct: 2 aagtcac 8
>hsa-miR-6820-3p MIMAT0027541 Homo sapiens miR-6820-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 aagtcac 7
|||||||
Sbjct: 8 aagtcac 2
>hsa-miR-3164 MIMAT0015038 Homo sapiens miR-3164
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 aagtcac 7
|||||||
Sbjct: 8 aagtcac 2
>eca-miR-224 MIMAT0013206 Equus caballus miR-224
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 aagtcac 7
|||||||
Sbjct: 2 aagtcac 8
>bta-miR-224 MIMAT0009271 Bos taurus miR-224
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 aagtcac 7
|||||||
Sbjct: 2 aagtcac 8
>cfa-miR-224 MIMAT0006744 Canis familiaris miR-224
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 aagtcac 7
|||||||
Sbjct: 2 aagtcac 8
>rno-miR-224-5p MIMAT0003119 Rattus norvegicus miR-224-5p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 aagtcac 7
|||||||
Sbjct: 2 aagtcac 8
>ppa-miR-224 MIMAT0002599 Pan paniscus miR-224
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 aagtcac 7
|||||||
Sbjct: 2 aagtcac 8
>mne-miR-224 MIMAT0002598 Macaca nemestrina miR-224
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 aagtcac 7
|||||||
Sbjct: 2 aagtcac 8
>ppy-miR-224 MIMAT0002597 Pongo pygmaeus miR-224
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 aagtcac 7
|||||||
Sbjct: 2 aagtcac 8
>ggo-miR-224 MIMAT0002596 Gorilla gorilla miR-224
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 aagtcac 7
|||||||
Sbjct: 2 aagtcac 8
>ptr-miR-224 MIMAT0002595 Pan troglodytes miR-224
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 aagtcac 7
|||||||
Sbjct: 2 aagtcac 8
>mml-miR-224-5p MIMAT0002594 Macaca mulatta miR-224-5p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 aagtcac 7
|||||||
Sbjct: 2 aagtcac 8
>ssc-miR-224 MIMAT0002132 Sus scrofa miR-224
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 aagtcac 7
|||||||
Sbjct: 2 aagtcac 8
>mmu-miR-224-5p MIMAT0000671 Mus musculus miR-224-5p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 aagtcac 7
|||||||
Sbjct: 2 aagtcac 8
>hsa-miR-224-5p MIMAT0000281 Homo sapiens miR-224-5p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 aagtcac 7
|||||||
Sbjct: 2 aagtcac 8
>oha-miR-1677b-3p MIMAT0036750 Ophiophagus hannah miR-1677b-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 aagtca 6
||||||
Sbjct: 6 aagtca 1
>chi-miR-134 MIMAT0035951 Capra hircus miR-134
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 agtcac 7
||||||
Sbjct: 7 agtcac 2
>chi-miR-125b-3p MIMAT0035926 Capra hircus miR-125b-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 aagtca 6
||||||
Sbjct: 3 aagtca 8
>tae-miR9671-5p MIMAT0035787 Triticum aestivum miR9671-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 aagtca 6
||||||
Sbjct: 6 aagtca 1
>dvi-miR-9548-3p MIMAT0035639 Drosophila virilis miR-9548-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 agtcac 7
||||||
Sbjct: 8 agtcac 3
>efu-miR-9202 MIMAT0034788 Eptesicus fuscus miR-9202
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 agtcac 7
||||||
Sbjct: 8 agtcac 3
>cfa-miR-8880 MIMAT0034380 Canis familiaris miR-8880
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 aagtca 6
||||||
Sbjct: 3 aagtca 8
>cfa-miR-8833 MIMAT0034326 Canis familiaris miR-8833
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 aagtca 6
||||||
Sbjct: 6 aagtca 1
>stu-miR8050-3p MIMAT0030976 Solanum tuberosum miR8050-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 aagtca 6
||||||
Sbjct: 6 aagtca 1
>osa-miR7692-3p MIMAT0029956 Oryza sativa miR7692-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 aagtca 6
||||||
Sbjct: 6 aagtca 1
>tgu-miR-7643-5p MIMAT0029786 Taeniopygia guttata miR-7643-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 agtcac 7
||||||
Sbjct: 6 agtcac 1
>gga-miR-7439-5p MIMAT0029032 Gallus gallus miR-7439-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 aagtca 6
||||||
Sbjct: 6 aagtca 1
>mdo-miR-7388a-3p MIMAT0028869 Monodelphis domestica
miR-7388a-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 aagtca 6
||||||
Sbjct: 1 aagtca 6
>mdo-miR-7373c-3p MIMAT0028805 Monodelphis domestica
miR-7373c-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 agtcac 7
||||||
Sbjct: 8 agtcac 3
>mmu-miR-7235-3p MIMAT0028439 Mus musculus miR-7235-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 aagtca 6
||||||
Sbjct: 8 aagtca 3
>mml-miR-6505-3p MIMAT0028249 Macaca mulatta miR-6505-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 aagtca 6
||||||
Sbjct: 6 aagtca 1
>mmu-miR-7079-3p MIMAT0028065 Mus musculus miR-7079-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 aagtca 6
||||||
Sbjct: 6 aagtca 1
>mmu-miR-6980-3p MIMAT0027863 Mus musculus miR-6980-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 aagtca 6
||||||
Sbjct: 6 aagtca 1
>gga-miR-6688-3p MIMAT0025794 Gallus gallus miR-6688-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 agtcac 7
||||||
Sbjct: 3 agtcac 8
>hsa-miR-6505-3p MIMAT0025467 Homo sapiens miR-6505-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 aagtca 6
||||||
Sbjct: 6 aagtca 1
>cgr-miR-134 MIMAT0023760 Cricetulus griseus miR-134
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 agtcac 7
||||||
Sbjct: 7 agtcac 2
>hco-miR-5989 MIMAT0023505 Haemonchus contortus miR-5989
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 agtcac 7
||||||
Sbjct: 3 agtcac 8
>hco-miR-5914 MIMAT0023383 Haemonchus contortus miR-5914
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 agtcac 7
||||||
Sbjct: 8 agtcac 3
>mmu-miR-344i MIMAT0022503 Mus musculus miR-344i
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 aagtca 6
||||||
Sbjct: 1 aagtca 6
>mmu-miR-5619-5p MIMAT0022365 Mus musculus miR-5619-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 agtcac 7
||||||
Sbjct: 1 agtcac 6
>aca-miR-5398-3p MIMAT0022007 Anolis carolinensis miR-5398-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 agtcac 7
||||||
Sbjct: 3 agtcac 8
>aca-miR-1677b-3p MIMAT0021798 Anolis carolinensis miR-1677b-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 aagtca 6
||||||
Sbjct: 6 aagtca 1
>aca-miR-1677a MIMAT0021796 Anolis carolinensis miR-1677a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 aagtca 6
||||||
Sbjct: 6 aagtca 1
>mtr-miR5255 MIMAT0021253 Medicago truncatula miR5255
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 aagtca 6
||||||
Sbjct: 6 aagtca 1
>hsa-miR-4704-3p MIMAT0019804 Homo sapiens miR-4704-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 agtcac 7
||||||
Sbjct: 3 agtcac 8
>oar-miR-134-5p MIMAT0019308 Ovis aries miR-134-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 agtcac 7
||||||
Sbjct: 7 agtcac 2
>hsa-miR-4439 MIMAT0018957 Homo sapiens miR-4439
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 agtcac 7
||||||
Sbjct: 6 agtcac 1
>ame-miR-3743 MIMAT0018612 Apis mellifera miR-3743
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 agtcac 7
||||||
Sbjct: 8 agtcac 3
>vvi-miR3639-5p MIMAT0018051 Vitis vinifera miR3639-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 aagtca 6
||||||
Sbjct: 8 aagtca 3
>rno-miR-3583-3p MIMAT0017874 Rattus norvegicus miR-3583-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 aagtca 6
||||||
Sbjct: 8 aagtca 3
>bmo-miR-3388-5p MIMAT0015587 Bombyx mori miR-3388-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 aagtca 6
||||||
Sbjct: 3 aagtca 8
>hsa-miR-3118 MIMAT0014980 Homo sapiens miR-3118
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 agtcac 7
||||||
Sbjct: 7 agtcac 2
>tgu-miR-125-1-3p MIMAT0014628 Taeniopygia guttata miR-125-1-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 aagtca 6
||||||
Sbjct: 3 aagtca 8
>tgu-miR-1803-3p MIMAT0014472 Taeniopygia guttata miR-1803-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 aagtca 6
||||||
Sbjct: 8 aagtca 3
>tgu-miR-1784-3p MIMAT0014457 Taeniopygia guttata miR-1784-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 aagtca 6
||||||
Sbjct: 6 aagtca 1
>eca-miR-134 MIMAT0013127 Equus caballus miR-134
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 agtcac 7
||||||
Sbjct: 7 agtcac 2
>mdo-miR-301-5p MIMAT0026932 Monodelphis domestica miR-301-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 aagtca 6
||||||
Sbjct: 8 aagtca 3
>dps-miR-2562-5p MIMAT0012386 Drosophila pseudoobscura
miR-2562-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 aagtca 6
||||||
Sbjct: 3 aagtca 8
>dps-miR-2549-5p MIMAT0012358 Drosophila pseudoobscura
miR-2549-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 aagtca 6
||||||
Sbjct: 3 aagtca 8
>bta-miR-2380 MIMAT0011928 Bos taurus miR-2380
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 agtcac 7
||||||
Sbjct: 6 agtcac 1
>sbi-miR821e MIMAT0011389 Sorghum bicolor miR821e
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 aagtca 6
||||||
Sbjct: 1 aagtca 6
>sbi-miR821d MIMAT0011388 Sorghum bicolor miR821d
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 aagtca 6
||||||
Sbjct: 1 aagtca 6
>sbi-miR821c MIMAT0011387 Sorghum bicolor miR821c
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 aagtca 6
||||||
Sbjct: 1 aagtca 6
>sbi-miR821a MIMAT0011385 Sorghum bicolor miR821a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 aagtca 6
||||||
Sbjct: 1 aagtca 6
>cfa-miR-134 MIMAT0009883 Canis familiaris miR-134
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 agtcac 7
||||||
Sbjct: 7 agtcac 2
>bta-miR-134 MIMAT0009227 Bos taurus miR-134
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 agtcac 7
||||||
Sbjct: 7 agtcac 2
>dya-miR-284 MIMAT0009087 Drosophila yakuba miR-284
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 aagtca 6
||||||
Sbjct: 3 aagtca 8
>dwi-miR-284 MIMAT0008993 Drosophila willistoni miR-284
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 aagtca 6
||||||
Sbjct: 3 aagtca 8
>dvi-miR-284-3p MIMAT0008977 Drosophila virilis miR-284-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 aagtca 6
||||||
Sbjct: 3 aagtca 8
>dsi-miR-284 MIMAT0008902 Drosophila simulans miR-284
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 aagtca 6
||||||
Sbjct: 3 aagtca 8
>dse-miR-284 MIMAT0008798 Drosophila sechellia miR-284
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 aagtca 6
||||||
Sbjct: 3 aagtca 8
>dpe-miR-284 MIMAT0008708 Drosophila persimilis miR-284
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 aagtca 6
||||||
Sbjct: 3 aagtca 8
>dmo-miR-284 MIMAT0008628 Drosophila mojavensis miR-284
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 aagtca 6
||||||
Sbjct: 3 aagtca 8
>dgr-miR-284 MIMAT0008611 Drosophila grimshawi miR-284
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 aagtca 6
||||||
Sbjct: 3 aagtca 8
>der-miR-284 MIMAT0008513 Drosophila erecta miR-284
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 aagtca 6
||||||
Sbjct: 3 aagtca 8
>dan-miR-284 MIMAT0008415 Drosophila ananassae miR-284
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 aagtca 6
||||||
Sbjct: 3 aagtca 8
>ptr-miR-134 MIMAT0008031 Pan troglodytes miR-134
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 agtcac 7
||||||
Sbjct: 7 agtcac 2
>mml-miR-301a-5p MIMAT0026850 Macaca mulatta miR-301a-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 aagtca 6
||||||
Sbjct: 8 aagtca 3
>mml-miR-134-5p MIMAT0006190 Macaca mulatta miR-134-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 agtcac 7
||||||
Sbjct: 7 agtcac 2
>gga-miR-1803 MIMAT0007720 Gallus gallus miR-1803
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 aagtca 6
||||||
Sbjct: 8 aagtca 3
>gga-miR-1802 MIMAT0007718 Gallus gallus miR-1802
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 agtcac 7
||||||
Sbjct: 8 agtcac 3
>gga-miR-1677-3p MIMAT0007563 Gallus gallus miR-1677-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 aagtca 6
||||||
Sbjct: 6 aagtca 1
>gga-miR-1574-5p MIMAT0007434 Gallus gallus miR-1574-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 agtcac 7
||||||
Sbjct: 8 agtcac 3
>mcmv-miR-m108-2-3p MIMAT0005561 Mouse cytomegalovirus
miR-m108-2-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 agtcac 7
||||||
Sbjct: 6 agtcac 1
>ppt-miR1032 MIMAT0005135 Physcomitrella patens miR1032
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 agtcac 7
||||||
Sbjct: 8 agtcac 3
>ath-miR864-3p MIMAT0004312 Arabidopsis thaliana miR864-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 aagtca 6
||||||
Sbjct: 3 aagtca 8
>osa-miR821c MIMAT0004084 Oryza sativa miR821c
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 aagtca 6
||||||
Sbjct: 1 aagtca 6
>osa-miR821b MIMAT0004083 Oryza sativa miR821b
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 aagtca 6
||||||
Sbjct: 1 aagtca 6
>osa-miR821a MIMAT0004082 Oryza sativa miR821a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 aagtca 6
||||||
Sbjct: 1 aagtca 6
>ppa-miR-134 MIMAT0002291 Pan paniscus miR-134
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 agtcac 7
||||||
Sbjct: 7 agtcac 2
>mne-miR-134 MIMAT0002290 Macaca nemestrina miR-134
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 agtcac 7
||||||
Sbjct: 7 agtcac 2
>ppy-miR-134 MIMAT0002289 Pongo pygmaeus miR-134
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 agtcac 7
||||||
Sbjct: 7 agtcac 2
>ggo-miR-134 MIMAT0002288 Gorilla gorilla miR-134
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 agtcac 7
||||||
Sbjct: 7 agtcac 2
>mml-miR-125b-2-3p MIMAT0031073 Macaca mulatta miR-125b-2-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 aagtca 6
||||||
Sbjct: 3 aagtca 8
>dps-miR-284 MIMAT0001248 Drosophila pseudoobscura miR-284
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 aagtca 6
||||||
Sbjct: 3 aagtca 8
>gga-miR-125b-3p MIMAT0026493 Gallus gallus miR-125b-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 aagtca 6
||||||
Sbjct: 3 aagtca 8
>rno-miR-134-5p MIMAT0000840 Rattus norvegicus miR-134-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 agtcac 7
||||||
Sbjct: 7 agtcac 2
>rno-miR-125b-2-3p MIMAT0026467 Rattus norvegicus miR-125b-2-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 aagtca 6
||||||
Sbjct: 3 aagtca 8
>hsa-miR-134-5p MIMAT0000447 Homo sapiens miR-134-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 agtcac 7
||||||
Sbjct: 7 agtcac 2
>mmu-miR-134-5p MIMAT0000146 Mus musculus miR-134-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 agtcac 7
||||||
Sbjct: 7 agtcac 2
>mmu-miR-125b-2-3p MIMAT0004529 Mus musculus miR-125b-2-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 aagtca 6
||||||
Sbjct: 3 aagtca 8
Database: /home/users/abid/BLAST/MIRBASE
Posted date: Sep 2, 2014 3:58 PM
Number of letters in database: 286,624
Number of sequences in database: 35,828
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 35828
Number of Hits to DB: 136
Number of extensions: 120
Number of successful extensions: 102
Number of sequences better than 100.0: 102
Number of HSP's gapped: 102
Number of HSP's successfully gapped: 102
Length of query: 7
Length of database: 286,624
Length adjustment: 4
Effective length of query: 3
Effective length of database: 143,312
Effective search space: 429936
Effective search space used: 429936
X1: 5 ( 9.9 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 5 (10.4 bits)
S2: 6 (12.4 bits)
