BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mdv2-miR-m18-3p
(7 letters)
Database: /home/users/abid/BLAST/MIRBASE
35,828 sequences; 286,624 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
mdo-miR-7386f-3p MIMAT0028857 Monodelphis domestica miR-7386f-3p 14 20
mdo-miR-7263-5p MIMAT0028492 Monodelphis domestica miR-7263-5p 14 20
osa-miR5509 MIMAT0022142 Oryza sativa miR5509 14 20
aca-miR-5435c-5p MIMAT0022093 Anolis carolinensis miR-5435c-5p 14 20
mtr-miR5267o MIMAT0021290 Medicago truncatula miR5267o 14 20
mtr-miR5267n MIMAT0021289 Medicago truncatula miR5267n 14 20
mtr-miR5267m MIMAT0021288 Medicago truncatula miR5267m 14 20
mtr-miR5267l MIMAT0021287 Medicago truncatula miR5267l 14 20
mtr-miR5267k MIMAT0021286 Medicago truncatula miR5267k 14 20
mtr-miR5267j MIMAT0021285 Medicago truncatula miR5267j 14 20
mtr-miR5267i MIMAT0021284 Medicago truncatula miR5267i 14 20
mtr-miR5267h MIMAT0021283 Medicago truncatula miR5267h 14 20
mtr-miR5267g MIMAT0021282 Medicago truncatula miR5267g 14 20
mtr-miR5267f MIMAT0021281 Medicago truncatula miR5267f 14 20
mtr-miR5267e MIMAT0021280 Medicago truncatula miR5267e 14 20
mtr-miR5267d MIMAT0021279 Medicago truncatula miR5267d 14 20
mtr-miR5267c MIMAT0021278 Medicago truncatula miR5267c 14 20
mtr-miR5267b MIMAT0021277 Medicago truncatula miR5267b 14 20
mtr-miR5267a MIMAT0021276 Medicago truncatula miR5267a 14 20
ppy-miR-1256 MIMAT0016182 Pongo pygmaeus miR-1256 14 20
bta-miR-1256 MIMAT0009960 Bos taurus miR-1256 14 20
ptr-miR-1256 MIMAT0007981 Pan troglodytes miR-1256 14 20
hsa-miR-1256 MIMAT0005907 Homo sapiens miR-1256 14 20
mdv2-miR-M18-3p MIMAT0004459 Mareks disease miR-M18-3p 14 20
ata-miR394-5p MIMAT0037234 Aegilops tauschii miR394-5p 12 80
oha-miR-202-3p MIMAT0036809 Ophiophagus hannah miR-202-3p 12 80
tch-miR-532-5p MIMAT0036591 Tupaia chinensis miR-532-5p 12 80
chi-miR-532-5p MIMAT0036270 Capra hircus miR-532-5p 12 80
sly-miR394-5p MIMAT0035437 Solanum lycopersicum miR394-5p 12 80
gsa-miR-2c-5p MIMAT0035276 Gyrodactylus salaris miR-2c-5p 12 80
dme-miR-9384-5p MIMAT0035231 Drosophila melanogaster miR-9384-5p 12 80
efu-miR-532 MIMAT0035153 Eptesicus fuscus miR-532 12 80
gra-miR8771e MIMAT0034145 Gossypium raimondii miR8771e 12 80
gra-miR8663b MIMAT0034033 Gossypium raimondii miR8663b 12 80
gra-miR172a MIMAT0033988 Gossypium raimondii miR172a 12 80
atr-miR394 MIMAT0033936 Amborella trichopoda miR394 12 80
str-miR-8395-3p MIMAT0033481 Strongyloides ratti miR-8395-3p 12 80
ssa-miR-456-5p MIMAT0032645 Salmo salar miR-456-5p 12 80
ssa-miR-153a-5p MIMAT0032387 Salmo salar miR-153a-5p 12 80
cpa-miR394b MIMAT0031816 Carica papaya miR394b 12 80
cpa-miR394a MIMAT0031815 Carica papaya miR394a 12 80
ppe-miR394b MIMAT0031476 Prunus persica miR394b 12 80
stu-miR384-5p MIMAT0031373 Solanum tuberosum miR384-5p 12 80
prd-miR-7913-5p MIMAT0030654 Panagrellus redivivus miR-7913-5p 12 80
mes-miR394c MIMAT0029267 Manihot esculenta miR394c 12 80
mes-miR394b MIMAT0029266 Manihot esculenta miR394b 12 80
gga-miR-7457-5p MIMAT0029068 Gallus gallus miR-7457-5p 12 80
sbi-miR6220-3p MIMAT0026405 Sorghum bicolor miR6220-3p 12 80
cme-miR394a MIMAT0026140 Cucumis melo miR394a 12 80
cme-miR394b MIMAT0026139 Cucumis melo miR394b 12 80
mdm-miR394b MIMAT0025979 Malus domestica miR394b 12 80
mdm-miR394a MIMAT0025978 Malus domestica miR394a 12 80
hsa-miR-6836-3p MIMAT0027575 Homo sapiens miR-6836-3p 12 80
gga-miR-6579-3p MIMAT0025666 Gallus gallus miR-6579-3p 12 80
mmu-miR-6386 MIMAT0025133 Mus musculus miR-6386 12 80
mmu-miR-6339 MIMAT0025082 Mus musculus miR-6339 12 80
gma-miR394g MIMAT0024919 Glycine max miR394g 12 80
ppe-miR6264 MIMAT0027281 Prunus persica miR6264 12 80
ppe-miR394a MIMAT0031167 Prunus persica miR394a 12 80
nta-miR394 MIMAT0024704 Nicotiana tabacum miR394 12 80
lus-miR394b MIMAT0027194 Linum usitatissimum miR394b 12 80
lus-miR394a MIMAT0027141 Linum usitatissimum miR394a 12 80
cca-miR394 MIMAT0024525 Cynara cardunculus miR394 12 80
mes-miR394a MIMAT0024417 Manihot esculenta miR394a 12 80
ggo-miR-532 MIMAT0024131 Gorilla gorilla miR-532 12 80
cgr-miR-532-5p MIMAT0023981 Cricetulus griseus miR-532-5p 12 80
bna-miR394b MIMAT0023635 Brassica napus miR394b 12 80
bna-miR394a MIMAT0023634 Brassica napus miR394a 12 80
gma-miR394f MIMAT0023239 Glycine max miR394f 12 80
gma-miR394e MIMAT0023230 Glycine max miR394e 12 80
gma-miR394d MIMAT0023210 Glycine max miR394d