BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mdv2-miR-m18-3p
         (7 letters)

Database: /home/users/abid/BLAST/MIRBASE 
           35,828 sequences; 286,624 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

mdo-miR-7386f-3p MIMAT0028857 Monodelphis domestica miR-7386f-3p       14      20
mdo-miR-7263-5p MIMAT0028492 Monodelphis domestica miR-7263-5p         14      20
osa-miR5509 MIMAT0022142 Oryza sativa miR5509                          14      20
aca-miR-5435c-5p MIMAT0022093 Anolis carolinensis miR-5435c-5p         14      20
mtr-miR5267o MIMAT0021290 Medicago truncatula miR5267o                 14      20
mtr-miR5267n MIMAT0021289 Medicago truncatula miR5267n                 14      20
mtr-miR5267m MIMAT0021288 Medicago truncatula miR5267m                 14      20
mtr-miR5267l MIMAT0021287 Medicago truncatula miR5267l                 14      20
mtr-miR5267k MIMAT0021286 Medicago truncatula miR5267k                 14      20
mtr-miR5267j MIMAT0021285 Medicago truncatula miR5267j                 14      20
mtr-miR5267i MIMAT0021284 Medicago truncatula miR5267i                 14      20
mtr-miR5267h MIMAT0021283 Medicago truncatula miR5267h                 14      20
mtr-miR5267g MIMAT0021282 Medicago truncatula miR5267g                 14      20
mtr-miR5267f MIMAT0021281 Medicago truncatula miR5267f                 14      20
mtr-miR5267e MIMAT0021280 Medicago truncatula miR5267e                 14      20
mtr-miR5267d MIMAT0021279 Medicago truncatula miR5267d                 14      20
mtr-miR5267c MIMAT0021278 Medicago truncatula miR5267c                 14      20
mtr-miR5267b MIMAT0021277 Medicago truncatula miR5267b                 14      20
mtr-miR5267a MIMAT0021276 Medicago truncatula miR5267a                 14      20
ppy-miR-1256 MIMAT0016182 Pongo pygmaeus miR-1256                      14      20
bta-miR-1256 MIMAT0009960 Bos taurus miR-1256                          14      20
ptr-miR-1256 MIMAT0007981 Pan troglodytes miR-1256                     14      20
hsa-miR-1256 MIMAT0005907 Homo sapiens miR-1256                        14      20
mdv2-miR-M18-3p MIMAT0004459 Mareks disease miR-M18-3p                 14      20
ata-miR394-5p MIMAT0037234 Aegilops tauschii miR394-5p                 12      80
oha-miR-202-3p MIMAT0036809 Ophiophagus hannah miR-202-3p              12      80
tch-miR-532-5p MIMAT0036591 Tupaia chinensis miR-532-5p                12      80
chi-miR-532-5p MIMAT0036270 Capra hircus miR-532-5p                    12      80
sly-miR394-5p MIMAT0035437 Solanum lycopersicum miR394-5p              12      80
gsa-miR-2c-5p MIMAT0035276 Gyrodactylus salaris miR-2c-5p              12      80
dme-miR-9384-5p MIMAT0035231 Drosophila melanogaster miR-9384-5p       12      80
efu-miR-532 MIMAT0035153 Eptesicus fuscus miR-532                      12      80
gra-miR8771e MIMAT0034145 Gossypium raimondii miR8771e                 12      80
gra-miR8663b MIMAT0034033 Gossypium raimondii miR8663b                 12      80
gra-miR172a MIMAT0033988 Gossypium raimondii miR172a                   12      80
atr-miR394 MIMAT0033936 Amborella trichopoda miR394                    12      80
str-miR-8395-3p MIMAT0033481 Strongyloides ratti miR-8395-3p           12      80
ssa-miR-456-5p MIMAT0032645 Salmo salar miR-456-5p                     12      80
ssa-miR-153a-5p MIMAT0032387 Salmo salar miR-153a-5p                   12      80
cpa-miR394b MIMAT0031816 Carica papaya miR394b                         12      80
cpa-miR394a MIMAT0031815 Carica papaya miR394a                         12      80
ppe-miR394b MIMAT0031476 Prunus persica miR394b                        12      80
stu-miR384-5p MIMAT0031373 Solanum tuberosum miR384-5p                 12      80
prd-miR-7913-5p MIMAT0030654 Panagrellus redivivus miR-7913-5p         12      80
mes-miR394c MIMAT0029267 Manihot esculenta miR394c                     12      80
mes-miR394b MIMAT0029266 Manihot esculenta miR394b                     12      80
gga-miR-7457-5p MIMAT0029068 Gallus gallus miR-7457-5p                 12      80
sbi-miR6220-3p MIMAT0026405 Sorghum bicolor miR6220-3p                 12      80
cme-miR394a MIMAT0026140 Cucumis melo miR394a                          12      80
cme-miR394b MIMAT0026139 Cucumis melo miR394b                          12      80
mdm-miR394b MIMAT0025979 Malus domestica miR394b                       12      80
mdm-miR394a MIMAT0025978 Malus domestica miR394a                       12      80
hsa-miR-6836-3p MIMAT0027575 Homo sapiens miR-6836-3p                  12      80
gga-miR-6579-3p MIMAT0025666 Gallus gallus miR-6579-3p                 12      80
mmu-miR-6386 MIMAT0025133 Mus musculus miR-6386                        12      80
mmu-miR-6339 MIMAT0025082 Mus musculus miR-6339                        12      80
gma-miR394g MIMAT0024919 Glycine max miR394g                           12      80
ppe-miR6264 MIMAT0027281 Prunus persica miR6264                        12      80
ppe-miR394a MIMAT0031167 Prunus persica miR394a                        12      80
nta-miR394 MIMAT0024704 Nicotiana tabacum miR394                       12      80
lus-miR394b MIMAT0027194 Linum usitatissimum miR394b                   12      80
lus-miR394a MIMAT0027141 Linum usitatissimum miR394a                   12      80
cca-miR394 MIMAT0024525 Cynara cardunculus miR394                      12      80
mes-miR394a MIMAT0024417 Manihot esculenta miR394a                     12      80
ggo-miR-532 MIMAT0024131 Gorilla gorilla miR-532                       12      80
cgr-miR-532-5p MIMAT0023981 Cricetulus griseus miR-532-5p              12      80
bna-miR394b MIMAT0023635 Brassica napus miR394b                        12      80
bna-miR394a MIMAT0023634 Brassica napus miR394a                        12      80
gma-miR394f MIMAT0023239 Glycine max miR394f                           12      80
gma-miR394e MIMAT0023230 Glycine max miR394e                           12      80
gma-miR394d MIMAT0023210 Glycine max miR394d