BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ohv2-miR-17-25
(7 letters)
Database: /home/users/abid/BLAST/MIRBASE
35,828 sequences; 286,624 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gra-miR172b MIMAT0034141 Gossypium raimondii miR172b 14 20
hsa-miR-7157-5p MIMAT0028224 Homo sapiens miR-7157-5p 14 20
aca-miR-5422 MIMAT0022042 Anolis carolinensis miR-5422 14 20
mtr-miR5288 MIMAT0021349 Medicago truncatula miR5288 14 20
pma-miR-4567 MIMAT0019599 Petromyzon marinus miR-4567 14 20
hsa-miR-4310 MIMAT0016862 Homo sapiens miR-4310 14 20
cin-miR-4062-3p MIMAT0016613 Ciona intestinalis miR-4062-3p 14 20
cin-miR-4059-3p MIMAT0016607 Ciona intestinalis miR-4059-3p 14 20
oha-miR-338-3p MIMAT0036904 Ophiophagus hannah miR-338-3p 12 80
oha-miR-103b-3p MIMAT0036659 Ophiophagus hannah miR-103b-3p 12 80
oha-miR-103a-3p MIMAT0036657 Ophiophagus hannah miR-103a-3p 12 80
oha-miR-107-3p MIMAT0036655 Ophiophagus hannah miR-107-3p 12 80
tch-miR-628-5p MIMAT0036621 Tupaia chinensis miR-628-5p 12 80
tch-miR-107 MIMAT0036508 Tupaia chinensis miR-107 12 80
tch-miR-103a-3p MIMAT0036480 Tupaia chinensis miR-103a-3p 12 80
tch-miR-155-5p MIMAT0036472 Tupaia chinensis miR-155-5p 12 80
chi-miR-628-5p MIMAT0036281 Capra hircus miR-628-5p 12 80
chi-miR-338-3p MIMAT0036150 Capra hircus miR-338-3p 12 80
chi-miR-155-5p MIMAT0035988 Capra hircus miR-155-5p 12 80
chi-miR-107-3p MIMAT0035910 Capra hircus miR-107-3p 12 80
chi-miR-103-3p MIMAT0035902 Capra hircus miR-103-3p 12 80
nve-miR-9412 MIMAT0035367 Nematostella vectensis miR-9412 12 80
efu-miR-628 MIMAT0035139 Eptesicus fuscus miR-628 12 80
efu-miR-103b MIMAT0035083 Eptesicus fuscus miR-103b 12 80
efu-miR-155 MIMAT0035061 Eptesicus fuscus miR-155 12 80
efu-miR-103a MIMAT0035011 Eptesicus fuscus miR-103a 12 80
efu-miR-107 MIMAT0034954 Eptesicus fuscus miR-107 12 80
cfa-miR-8877 MIMAT0034377 Canis familiaris miR-8877 12 80
pxy-miR-8507-3p MIMAT0033725 Plutella xylostella miR-8507-3p 12 80
str-miR-8393-5p MIMAT0033458 Strongyloides ratti miR-8393-5p 12 80
ssa-miR-734-3p MIMAT0032739 Salmo salar miR-734-3p 12 80
ssa-miR-338a-3p MIMAT0032615 Salmo salar miR-338a-3p 12 80
ssa-miR-155-5p MIMAT0032392 Salmo salar miR-155-5p 12 80
ssa-miR-107-3p MIMAT0032291 Salmo salar miR-107-3p 12 80
ssa-miR-103-3p MIMAT0032285 Salmo salar miR-103-3p 12 80
bbe-miR-2013-3p MIMAT0031611 Branchiostoma belcheri miR-2013-3p 12 80
stu-miR7997b MIMAT0030886 Solanum tuberosum miR7997b 12 80
stu-miR7997a MIMAT0030885 Solanum tuberosum miR7997a 12 80
rno-miR-155-5p MIMAT0030409 Rattus norvegicus miR-155-5p 12 80
oar-miR-107 MIMAT0030029 Ovis aries miR-107 12 80
oar-miR-103 MIMAT0030027 Ovis aries miR-103 12 80
lva-miR-2013-3p MIMAT0032234 Lytechinus variegatus miR-2013-3p 12 80
pmi-miR-2013-3p MIMAT0032188 Patiria miniata miR-2013-3p 12 80
ipu-miR-338 MIMAT0029502 Ictalurus punctatus miR-338 12 80
ipu-miR-155 MIMAT0029429 Ictalurus punctatus miR-155 12 80
ipu-miR-107b MIMAT0029390 Ictalurus punctatus miR-107b 12 80
ipu-miR-107a MIMAT0029389 Ictalurus punctatus miR-107a 12 80
ipu-miR-103 MIMAT0029388 Ictalurus punctatus miR-103 12 80
mdo-miR-7381-3p MIMAT0028819 Monodelphis domestica miR-7381-3p 12 80
mml-miR-7173-5p MIMAT0028284 Macaca mulatta miR-7173-5p 12 80
ccr-miR-734 MIMAT0026318 Cyprinus carpio miR-734 12 80
ccr-miR-338 MIMAT0026291 Cyprinus carpio miR-338 12 80
ccr-miR-155 MIMAT0026231 Cyprinus carpio miR-155 12 80
ccr-miR-107 MIMAT0026199 Cyprinus carpio miR-107 12 80
ccr-miR-103 MIMAT0026198 Cyprinus carpio miR-103 12 80
ggo-miR-155 MIMAT0024221 Gorilla gorilla miR-155 12 80
ggo-miR-628 MIMAT0024185 Gorilla gorilla miR-628 12 80
ggo-miR-338 MIMAT0024125 Gorilla gorilla miR-338 12 80
cgr-miR-628 MIMAT0023989 Cricetulus griseus miR-628 12 80
cgr-miR-338 MIMAT0023918 Cricetulus griseus miR-338 12 80
cgr-miR-155 MIMAT0023788 Cricetulus griseus miR-155 12 80
cgr-miR-107 MIMAT0023734 Cricetulus griseus miR-107 12 80
cgr-miR-103-3p MIMAT0023731 Cricetulus griseus miR-103-3p 12 80
sha-miR-338 MIMAT0022818 Sarcophilus harrisii miR-338 12 80
ola-miR-107 MIMAT0022632 Oryzias latipes miR-107 12 80
ola-miR-103 MIMAT0022593 Oryzias latipes miR-103 12 80
ola-miR-338-3p MIMAT0022580 Oryzias latipes miR-338-3p 12 80
sbi-miR5566 MIMAT0022245 Sorghum bicolor miR5566 12 80
aca-miR-338-3p MIMAT0021938 Anolis carolinensis miR-338-3p 12 80
aca-miR-155-5p MIMAT0021788 Anolis carolinensis miR-155-5p 12 80
aca-miR-103-3p MIMAT0021716 Anolis carolinensis miR-103-3p 12 80
aca-miR-107-3p MIMAT0021714 Anolis carolinensis miR-107-3p 12 80
sly-miR5304 MIMAT0020768 Solanum lycopersicum miR5304 12 80
gma-miR167i MIMAT0021076 Glycine max miR167i 12 80
xbo-miR-2013 MIMAT0020119 Xenoturbella bocki miR-2013 12 80
pma-miR-4545-3p MIMAT0019576 Petromyzon marinus miR-4545-3p 12 80
pma-miR-155 MIMAT0019485 Petromyzon marinus miR-155 12 80
pma-miR-103b-3p MIMAT0019443 Petromyzon marinus miR-103b-3p 12 80
pma-miR-103a MIMAT0019441 Petromyzon marinus miR-103a 12 80
tca-miR-3849-3p MIMAT0018753 Tribolium castaneum miR-3849-3p 12 80
ssc-miR-155-5p MIMAT0022959 Sus scrofa miR-155-5p 12 80
cin-miR-4156-3p MIMAT0016762 Ciona intestinalis miR-4156-3p 12 80
cin-miR-4012-3p MIMAT0016513 Ciona intestinalis miR-4012-3p 12 80
ppy-miR-628-5p MIMAT0016067 Pongo pygmaeus miR-628-5p 12 80
ppy-miR-338-3p MIMAT0015841 Pongo pygmaeus miR-338-3p 12 80
ppy-miR-155 MIMAT0015777 Pongo pygmaeus miR-155 12 80
ssc-miR-338 MIMAT0015713 Sus scrofa miR-338 12 80
aly-miR862-3p MIMAT0017654 Arabidopsis lyrata miR862-3p 12 80
tgu-miR-155-5p MIMAT0014612 Taeniopygia guttata miR-155-5p 12 80
tgu-miR-107 MIMAT0014556 Taeniopygia guttata miR-107 12 80
tgu-miR-338-3p MIMAT0014542 Taeniopygia guttata miR-338-3p 12 80
tgu-miR-103-3p MIMAT0014523 Taeniopygia guttata miR-103-3p 12 80
ssc-miR-628 MIMAT0013953 Sus scrofa miR-628 12 80
eca-miR-155 MIMAT0013182 Equus caballus miR-155 12 80
eca-miR-103 MIMAT0013105 Equus caballus miR-103 12 80
eca-miR-107a MIMAT0013061 Equus caballus miR-107a 12 80
eca-miR-338-3p MIMAT0013036 Equus caballus miR-338-3p 12 80
eca-miR-628a MIMAT0012903 Equus caballus miR-628a 12 80
eca-miR-107b MIMAT0012886 Equus caballus miR-107b 12 80
rno-miR-628 MIMAT0012836 Rattus norvegicus miR-628 12 80
dps-miR-2557-5p MIMAT0012376 Drosophila pseudoobscura miR-2557-5p 12 80
dre-miR-2194 MIMAT0011315 Danio rerio miR-2194 12 80
dre-miR-107b MIMAT0011301 Danio rerio miR-107b 12 80
osa-miR2092-3p MIMAT0010049 Oryza sativa miR2092-3p 12 80
bfl-miR-2013 MIMAT0009991 Branchiostoma floridae miR-2013 12 80
cfa-miR-628 MIMAT0009921 Canis familiaris miR-628 12 80
spu-miR-2013 MIMAT0009742 Strongylocentrotus purpuratus miR-2013 12 80
sko-miR-2013 MIMAT0009737 Saccoglossus kowalevskii miR-2013 12 80
bta-miR-628 MIMAT0009356 Bos taurus miR-628 12 80
bta-miR-338 MIMAT0009292 Bos taurus miR-338 12 80
bta-miR-155 MIMAT0009241 Bos taurus miR-155 12 80
ptr-miR-338 MIMAT0008106 Pan troglodytes miR-338 12 80
ptr-miR-155 MIMAT0008048 Pan troglodytes miR-155 12 80
osa-miR1853-5p MIMAT0007773 Oryza sativa miR1853-5p 12 80
cfa-miR-338 MIMAT0006739 Canis familiaris miR-338 12 80
cfa-miR-103 MIMAT0006687 Canis familiaris miR-103 12 80
cfa-miR-155 MIMAT0006671 Canis familiaris miR-155 12 80
cfa-miR-107 MIMAT0006666 Canis familiaris miR-107 12 80
mml-miR-628-5p MIMAT0006474 Macaca mulatta miR-628-5p 12 80
mml-miR-338-3p MIMAT0006278 Macaca mulatta miR-338-3p 12 80
mml-miR-155 MIMAT0006216 Macaca mulatta miR-155 12 80
gga-miR-1775-5p MIMAT0026784 Gallus gallus miR-1775-5p 12 80
csa-miR-155 MIMAT0006131 Ciona savignyi miR-155 12 80
cin-miR-155 MIMAT0006105 Ciona intestinalis miR-155 12 80
oan-miR-1419e-5p MIMAT0007262 Ornithorhynchus anatinus miR-1419e-5p 12 80
oan-miR-107-3p MIMAT0007119 Ornithorhynchus anatinus miR-107-3p 12 80
oan-miR-155-5p MIMAT0006988 Ornithorhynchus anatinus miR-155-5p 12 80
oan-miR-103-3p MIMAT0006942 Ornithorhynchus anatinus miR-103-3p 12 80
oan-miR-1344 MIMAT0006906 Ornithorhynchus anatinus miR-1344 12 80
ppt-miR1031b MIMAT0005134 Physcomitrella patens miR1031b 12 80
ppt-miR1031a MIMAT0005133 Physcomitrella patens miR1031a 12 80
ath-miR862-3p MIMAT0004308 Arabidopsis thaliana miR862-3p 12 80
mdo-miR-338 MIMAT0004136 Monodelphis domestica miR-338 12 80
mdo-miR-107 MIMAT0004100 Monodelphis domestica miR-107 12 80
mdo-miR-103-3p MIMAT0004099 Monodelphis domestica miR-103-3p 12 80
sme-miR-1a-5p MIMAT0012090 Schmidtea mediterranea miR-1a-5p 12 80
mdv1-miR-M4-5p MIMAT0003924 Mareks disease miR-M4-5p 12 80
bta-miR-107 MIMAT0003785 Bos taurus miR-107 12 80
xtr-miR-338 MIMAT0003665 Xenopus tropicalis miR-338 12 80
xtr-miR-103 MIMAT0003663 Xenopus tropicalis miR-103 12 80
xtr-miR-155 MIMAT0003608 Xenopus tropicalis miR-155 12 80
xtr-miR-107 MIMAT0003584 Xenopus tropicalis miR-107 12 80
bta-miR-103 MIMAT0003521 Bos taurus miR-103 12 80
ebv-miR-BART14-3p MIMAT0003426 Epstein Barr miR-BART14-3p 12 80
hsa-miR-628-5p MIMAT0004809 Homo sapiens miR-628-5p 12 80
tni-miR-107 MIMAT0003044 Tetraodon nigroviridis miR-107 12 80
fru-miR-107 MIMAT0003043 Fugu rubripes miR-107 12 80
tni-miR-103 MIMAT0003042 Tetraodon nigroviridis miR-103 12 80
fru-miR-103 MIMAT0003041 Fugu rubripes miR-103 12 80
tni-miR-338 MIMAT0003008 Tetraodon nigroviridis miR-338 12 80
fru-miR-338 MIMAT0003007 Fugu rubripes miR-338 12 80
ppa-miR-107 MIMAT0002464 Pan paniscus miR-107 12 80
mne-miR-107 MIMAT0002463 Macaca nemestrina miR-107 12 80
lla-miR-107 MIMAT0002462 Lagothrix lagotricha miR-107 12 80
ppy-miR-107 MIMAT0002461 Pongo pygmaeus miR-107 12 80
ggo-miR-107 MIMAT0002460 Gorilla gorilla miR-107 12 80
ptr-miR-107 MIMAT0002459 Pan troglodytes miR-107 12 80
mml-miR-107-3p MIMAT0002458 Macaca mulatta miR-107-3p 12 80
mne-miR-103 MIMAT0002449 Macaca nemestrina miR-103 12 80
lla-miR-103 MIMAT0002448 Lagothrix lagotricha miR-103 12 80
mml-miR-103-3p MIMAT0002447 Macaca mulatta miR-103-3p 12 80
ptr-miR-103 MIMAT0002446 Pan troglodytes miR-103 12 80
ppy-miR-103 MIMAT0002445 Pongo pygmaeus miR-103 12 80
ppa-miR-103 MIMAT0002444 Pan paniscus miR-103 12 80
ggo-miR-103 MIMAT0002443 Gorilla gorilla miR-103 12 80
age-miR-103 MIMAT0002442 Ateles geoffroyi miR-103 12 80
kshv-miR-K12-11-3p MIMAT0002181 Kaposi sarcoma-associated miR-K1... 12 80
ssc-miR-107 MIMAT0002155 Sus scrofa miR-107 12 80
ssc-miR-103 MIMAT0002154 Sus scrofa miR-103 12 80
dre-miR-338 MIMAT0001873 Danio rerio miR-338 12 80
dre-miR-155 MIMAT0001851 Danio rerio miR-155 12 80
dre-miR-107a-3p MIMAT0001817 Danio rerio miR-107a-3p 12 80
dre-miR-103 MIMAT0001816 Danio rerio miR-103 12 80
gga-miR-107-3p MIMAT0001147 Gallus gallus miR-107-3p 12 80
gga-miR-103-3p MIMAT0001145 Gallus gallus miR-103-3p 12 80
gga-miR-155 MIMAT0001106 Gallus gallus miR-155 12 80
rno-miR-107-3p MIMAT0000826 Rattus norvegicus miR-107-3p 12 80
rno-miR-103-3p MIMAT0000824 Rattus norvegicus miR-103-3p 12 80
cel-miR-392-5p MIMAT0020344 Caenorhabditis elegans miR-392-5p 12 80
hsa-miR-338-3p MIMAT0000763 Homo sapiens miR-338-3p 12 80
mmu-miR-107-3p MIMAT0000647 Mus musculus miR-107-3p 12 80
hsa-miR-155-5p MIMAT0000646 Homo sapiens miR-155-5p 12 80
mmu-miR-338-3p MIMAT0000582 Mus musculus miR-338-3p 12 80
rno-miR-338-3p MIMAT0000581 Rattus norvegicus miR-338-3p 12 80
mmu-miR-103-3p MIMAT0000546 Mus musculus miR-103-3p 12 80
mmu-miR-155-5p MIMAT0000165 Mus musculus miR-155-5p 12 80
hsa-miR-107 MIMAT0000104 Homo sapiens miR-107 12 80
hsa-miR-103a-3p MIMAT0000101 Homo sapiens miR-103a-3p 12 80
>gra-miR172b MIMAT0034141 Gossypium raimondii miR172b
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 aatgctg 7
|||||||
Sbjct: 8 aatgctg 2
>hsa-miR-7157-5p MIMAT0028224 Homo sapiens miR-7157-5p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 aatgctg 7
|||||||
Sbjct: 8 aatgctg 2
>aca-miR-5422 MIMAT0022042 Anolis carolinensis miR-5422
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 aatgctg 7
|||||||
Sbjct: 8 aatgctg 2
>mtr-miR5288 MIMAT0021349 Medicago truncatula miR5288
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 aatgctg 7
|||||||
Sbjct: 7 aatgctg 1
>pma-miR-4567 MIMAT0019599 Petromyzon marinus miR-4567
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 aatgctg 7
|||||||
Sbjct: 2 aatgctg 8
>hsa-miR-4310 MIMAT0016862 Homo sapiens miR-4310
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 aatgctg 7
|||||||
Sbjct: 8 aatgctg 2
>cin-miR-4062-3p MIMAT0016613 Ciona intestinalis miR-4062-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 aatgctg 7
|||||||
Sbjct: 1 aatgctg 7
>cin-miR-4059-3p MIMAT0016607 Ciona intestinalis miR-4059-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 aatgctg 7
|||||||
Sbjct: 2 aatgctg 8
>oha-miR-338-3p MIMAT0036904 Ophiophagus hannah miR-338-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 atgctg 7
||||||
Sbjct: 8 atgctg 3
>oha-miR-103b-3p MIMAT0036659 Ophiophagus hannah miR-103b-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 atgctg 7
||||||
Sbjct: 8 atgctg 3
>oha-miR-103a-3p MIMAT0036657 Ophiophagus hannah miR-103a-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 atgctg 7
||||||
Sbjct: 8 atgctg 3
>oha-miR-107-3p MIMAT0036655 Ophiophagus hannah miR-107-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 atgctg 7
||||||
Sbjct: 8 atgctg 3
>tch-miR-628-5p MIMAT0036621 Tupaia chinensis miR-628-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 atgctg 7
||||||
Sbjct: 1 atgctg 6
>tch-miR-107 MIMAT0036508 Tupaia chinensis miR-107
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 atgctg 7
||||||
Sbjct: 8 atgctg 3
>tch-miR-103a-3p MIMAT0036480 Tupaia chinensis miR-103a-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 atgctg 7
||||||
Sbjct: 8 atgctg 3
>tch-miR-155-5p MIMAT0036472 Tupaia chinensis miR-155-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 aatgct 6
||||||
Sbjct: 3 aatgct 8
>chi-miR-628-5p MIMAT0036281 Capra hircus miR-628-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 atgctg 7
||||||
Sbjct: 1 atgctg 6
>chi-miR-338-3p MIMAT0036150 Capra hircus miR-338-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 atgctg 7
||||||
Sbjct: 8 atgctg 3
>chi-miR-155-5p MIMAT0035988 Capra hircus miR-155-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 aatgct 6
||||||
Sbjct: 3 aatgct 8
>chi-miR-107-3p MIMAT0035910 Capra hircus miR-107-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 atgctg 7
||||||
Sbjct: 8 atgctg 3
>chi-miR-103-3p MIMAT0035902 Capra hircus miR-103-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 atgctg 7
||||||
Sbjct: 8 atgctg 3
>nve-miR-9412 MIMAT0035367 Nematostella vectensis miR-9412
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 aatgct 6
||||||
Sbjct: 3 aatgct 8
>efu-miR-628 MIMAT0035139 Eptesicus fuscus miR-628
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 atgctg 7
||||||
Sbjct: 1 atgctg 6
>efu-miR-103b MIMAT0035083 Eptesicus fuscus miR-103b
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 atgctg 7
||||||
Sbjct: 8 atgctg 3
>efu-miR-155 MIMAT0035061 Eptesicus fuscus miR-155
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 aatgct 6
||||||
Sbjct: 3 aatgct 8
>efu-miR-103a MIMAT0035011 Eptesicus fuscus miR-103a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 atgctg 7
||||||
Sbjct: 8 atgctg 3
>efu-miR-107 MIMAT0034954 Eptesicus fuscus miR-107
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 atgctg 7
||||||
Sbjct: 8 atgctg 3
>cfa-miR-8877 MIMAT0034377 Canis familiaris miR-8877
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 atgctg 7
||||||
Sbjct: 3 atgctg 8
>pxy-miR-8507-3p MIMAT0033725 Plutella xylostella miR-8507-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 atgctg 7
||||||
Sbjct: 6 atgctg 1
>str-miR-8393-5p MIMAT0033458 Strongyloides ratti miR-8393-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 aatgct 6
||||||
Sbjct: 6 aatgct 1
>ssa-miR-734-3p MIMAT0032739 Salmo salar miR-734-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 aatgct 6
||||||
Sbjct: 3 aatgct 8
>ssa-miR-338a-3p MIMAT0032615 Salmo salar miR-338a-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 atgctg 7
||||||
Sbjct: 8 atgctg 3
>ssa-miR-155-5p MIMAT0032392 Salmo salar miR-155-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 aatgct 6
||||||
Sbjct: 3 aatgct 8
>ssa-miR-107-3p MIMAT0032291 Salmo salar miR-107-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 atgctg 7
||||||
Sbjct: 8 atgctg 3
>ssa-miR-103-3p MIMAT0032285 Salmo salar miR-103-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 atgctg 7
||||||
Sbjct: 8 atgctg 3
>bbe-miR-2013-3p MIMAT0031611 Branchiostoma belcheri miR-2013-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 atgctg 7
||||||
Sbjct: 8 atgctg 3
>stu-miR7997b MIMAT0030886 Solanum tuberosum miR7997b
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 atgctg 7
||||||
Sbjct: 1 atgctg 6
>stu-miR7997a MIMAT0030885 Solanum tuberosum miR7997a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 atgctg 7
||||||
Sbjct: 1 atgctg 6
>rno-miR-155-5p MIMAT0030409 Rattus norvegicus miR-155-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 aatgct 6
||||||
Sbjct: 3 aatgct 8
>oar-miR-107 MIMAT0030029 Ovis aries miR-107
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 atgctg 7
||||||
Sbjct: 8 atgctg 3
>oar-miR-103 MIMAT0030027 Ovis aries miR-103
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 atgctg 7
||||||
Sbjct: 8 atgctg 3
>lva-miR-2013-3p MIMAT0032234 Lytechinus variegatus miR-2013-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 atgctg 7
||||||
Sbjct: 8 atgctg 3
>pmi-miR-2013-3p MIMAT0032188 Patiria miniata miR-2013-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 atgctg 7
||||||
Sbjct: 8 atgctg 3
>ipu-miR-338 MIMAT0029502 Ictalurus punctatus miR-338
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 atgctg 7
||||||
Sbjct: 8 atgctg 3
>ipu-miR-155 MIMAT0029429 Ictalurus punctatus miR-155
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 aatgct 6
||||||
Sbjct: 3 aatgct 8
>ipu-miR-107b MIMAT0029390 Ictalurus punctatus miR-107b
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 atgctg 7
||||||
Sbjct: 8 atgctg 3
>ipu-miR-107a MIMAT0029389 Ictalurus punctatus miR-107a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 atgctg 7
||||||
Sbjct: 8 atgctg 3
>ipu-miR-103 MIMAT0029388 Ictalurus punctatus miR-103
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 atgctg 7
||||||
Sbjct: 8 atgctg 3
>mdo-miR-7381-3p MIMAT0028819 Monodelphis domestica miR-7381-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 atgctg 7
||||||
Sbjct: 1 atgctg 6
>mml-miR-7173-5p MIMAT0028284 Macaca mulatta miR-7173-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 atgctg 7
||||||
Sbjct: 1 atgctg 6
>ccr-miR-734 MIMAT0026318 Cyprinus carpio miR-734
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 aatgct 6
||||||
Sbjct: 3 aatgct 8
>ccr-miR-338 MIMAT0026291 Cyprinus carpio miR-338
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 atgctg 7
||||||
Sbjct: 8 atgctg 3
>ccr-miR-155 MIMAT0026231 Cyprinus carpio miR-155
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 aatgct 6
||||||
Sbjct: 3 aatgct 8
>ccr-miR-107 MIMAT0026199 Cyprinus carpio miR-107
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 atgctg 7
||||||
Sbjct: 8 atgctg 3
>ccr-miR-103 MIMAT0026198 Cyprinus carpio miR-103
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 atgctg 7
||||||
Sbjct: 8 atgctg 3
>ggo-miR-155 MIMAT0024221 Gorilla gorilla miR-155
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 aatgct 6
||||||
Sbjct: 3 aatgct 8
>ggo-miR-628 MIMAT0024185 Gorilla gorilla miR-628
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 atgctg 7
||||||
Sbjct: 1 atgctg 6
>ggo-miR-338 MIMAT0024125 Gorilla gorilla miR-338
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 atgctg 7
||||||
Sbjct: 8 atgctg 3
>cgr-miR-628 MIMAT0023989 Cricetulus griseus miR-628
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 atgctg 7
||||||
Sbjct: 1 atgctg 6
>cgr-miR-338 MIMAT0023918 Cricetulus griseus miR-338
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 atgctg 7
||||||
Sbjct: 8 atgctg 3
>cgr-miR-155 MIMAT0023788 Cricetulus griseus miR-155
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 aatgct 6
||||||
Sbjct: 3 aatgct 8
>cgr-miR-107 MIMAT0023734 Cricetulus griseus miR-107
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 atgctg 7
||||||
Sbjct: 8 atgctg 3
>cgr-miR-103-3p MIMAT0023731 Cricetulus griseus miR-103-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 atgctg 7
||||||
Sbjct: 8 atgctg 3
>sha-miR-338 MIMAT0022818 Sarcophilus harrisii miR-338
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 atgctg 7
||||||
Sbjct: 8 atgctg 3
>ola-miR-107 MIMAT0022632 Oryzias latipes miR-107
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 atgctg 7
||||||
Sbjct: 8 atgctg 3
>ola-miR-103 MIMAT0022593 Oryzias latipes miR-103
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 atgctg 7
||||||
Sbjct: 8 atgctg 3
>ola-miR-338-3p MIMAT0022580 Oryzias latipes miR-338-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 atgctg 7
||||||
Sbjct: 8 atgctg 3
>sbi-miR5566 MIMAT0022245 Sorghum bicolor miR5566
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 atgctg 7
||||||
Sbjct: 7 atgctg 2
>aca-miR-338-3p MIMAT0021938 Anolis carolinensis miR-338-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 atgctg 7
||||||
Sbjct: 8 atgctg 3
>aca-miR-155-5p MIMAT0021788 Anolis carolinensis miR-155-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 aatgct 6
||||||
Sbjct: 3 aatgct 8
>aca-miR-103-3p MIMAT0021716 Anolis carolinensis miR-103-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 atgctg 7
||||||
Sbjct: 8 atgctg 3
>aca-miR-107-3p MIMAT0021714 Anolis carolinensis miR-107-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 atgctg 7
||||||
Sbjct: 8 atgctg 3
>sly-miR5304 MIMAT0020768 Solanum lycopersicum miR5304
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 aatgct 6
||||||
Sbjct: 3 aatgct 8
>gma-miR167i MIMAT0021076 Glycine max miR167i
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 atgctg 7
||||||
Sbjct: 3 atgctg 8
>xbo-miR-2013 MIMAT0020119 Xenoturbella bocki miR-2013
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 atgctg 7
||||||
Sbjct: 8 atgctg 3
>pma-miR-4545-3p MIMAT0019576 Petromyzon marinus miR-4545-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 atgctg 7
||||||
Sbjct: 8 atgctg 3
>pma-miR-155 MIMAT0019485 Petromyzon marinus miR-155
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 aatgct 6
||||||
Sbjct: 3 aatgct 8
>pma-miR-103b-3p MIMAT0019443 Petromyzon marinus miR-103b-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 atgctg 7
||||||
Sbjct: 8 atgctg 3
>pma-miR-103a MIMAT0019441 Petromyzon marinus miR-103a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 atgctg 7
||||||
Sbjct: 8 atgctg 3
>tca-miR-3849-3p MIMAT0018753 Tribolium castaneum miR-3849-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 aatgct 6
||||||
Sbjct: 6 aatgct 1
>ssc-miR-155-5p MIMAT0022959 Sus scrofa miR-155-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 aatgct 6
||||||
Sbjct: 3 aatgct 8
>cin-miR-4156-3p MIMAT0016762 Ciona intestinalis miR-4156-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 atgctg 7
||||||
Sbjct: 3 atgctg 8
>cin-miR-4012-3p MIMAT0016513 Ciona intestinalis miR-4012-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 aatgct 6
||||||
Sbjct: 6 aatgct 1
>ppy-miR-628-5p MIMAT0016067 Pongo pygmaeus miR-628-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 atgctg 7
||||||
Sbjct: 1 atgctg 6
>ppy-miR-338-3p MIMAT0015841 Pongo pygmaeus miR-338-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 atgctg 7
||||||
Sbjct: 8 atgctg 3
>ppy-miR-155 MIMAT0015777 Pongo pygmaeus miR-155
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 aatgct 6
||||||
Sbjct: 3 aatgct 8
>ssc-miR-338 MIMAT0015713 Sus scrofa miR-338
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 atgctg 7
||||||
Sbjct: 8 atgctg 3
>aly-miR862-3p MIMAT0017654 Arabidopsis lyrata miR862-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 atgctg 7
||||||
Sbjct: 3 atgctg 8
>tgu-miR-155-5p MIMAT0014612 Taeniopygia guttata miR-155-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 aatgct 6
||||||
Sbjct: 3 aatgct 8
>tgu-miR-107 MIMAT0014556 Taeniopygia guttata miR-107
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 atgctg 7
||||||
Sbjct: 8 atgctg 3
>tgu-miR-338-3p MIMAT0014542 Taeniopygia guttata miR-338-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 atgctg 7
||||||
Sbjct: 8 atgctg 3
>tgu-miR-103-3p MIMAT0014523 Taeniopygia guttata miR-103-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 atgctg 7
||||||
Sbjct: 8 atgctg 3
>ssc-miR-628 MIMAT0013953 Sus scrofa miR-628
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 atgctg 7
||||||
Sbjct: 1 atgctg 6
>eca-miR-155 MIMAT0013182 Equus caballus miR-155
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 aatgct 6
||||||
Sbjct: 3 aatgct 8
>eca-miR-103 MIMAT0013105 Equus caballus miR-103
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 atgctg 7
||||||
Sbjct: 8 atgctg 3
>eca-miR-107a MIMAT0013061 Equus caballus miR-107a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 atgctg 7
||||||
Sbjct: 8 atgctg 3
>eca-miR-338-3p MIMAT0013036 Equus caballus miR-338-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 atgctg 7
||||||
Sbjct: 8 atgctg 3
>eca-miR-628a MIMAT0012903 Equus caballus miR-628a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 atgctg 7
||||||
Sbjct: 1 atgctg 6
>eca-miR-107b MIMAT0012886 Equus caballus miR-107b
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 atgctg 7
||||||
Sbjct: 8 atgctg 3
>rno-miR-628 MIMAT0012836 Rattus norvegicus miR-628
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 atgctg 7
||||||
Sbjct: 1 atgctg 6
>dps-miR-2557-5p MIMAT0012376 Drosophila pseudoobscura
miR-2557-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 atgctg 7
||||||
Sbjct: 3 atgctg 8
>dre-miR-2194 MIMAT0011315 Danio rerio miR-2194
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 aatgct 6
||||||
Sbjct: 3 aatgct 8
>dre-miR-107b MIMAT0011301 Danio rerio miR-107b
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 atgctg 7
||||||
Sbjct: 8 atgctg 3
>osa-miR2092-3p MIMAT0010049 Oryza sativa miR2092-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 atgctg 7
||||||
Sbjct: 8 atgctg 3
>bfl-miR-2013 MIMAT0009991 Branchiostoma floridae miR-2013
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 atgctg 7
||||||
Sbjct: 8 atgctg 3
>cfa-miR-628 MIMAT0009921 Canis familiaris miR-628
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 atgctg 7
||||||
Sbjct: 1 atgctg 6
>spu-miR-2013 MIMAT0009742 Strongylocentrotus purpuratus
miR-2013
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 atgctg 7
||||||
Sbjct: 8 atgctg 3
>sko-miR-2013 MIMAT0009737 Saccoglossus kowalevskii miR-2013
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 atgctg 7
||||||
Sbjct: 8 atgctg 3
>bta-miR-628 MIMAT0009356 Bos taurus miR-628
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 atgctg 7
||||||
Sbjct: 1 atgctg 6
>bta-miR-338 MIMAT0009292 Bos taurus miR-338
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 atgctg 7
||||||
Sbjct: 8 atgctg 3
>bta-miR-155 MIMAT0009241 Bos taurus miR-155
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 aatgct 6
||||||
Sbjct: 3 aatgct 8
>ptr-miR-338 MIMAT0008106 Pan troglodytes miR-338
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 atgctg 7
||||||
Sbjct: 8 atgctg 3
>ptr-miR-155 MIMAT0008048 Pan troglodytes miR-155
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 aatgct 6
||||||
Sbjct: 3 aatgct 8
>osa-miR1853-5p MIMAT0007773 Oryza sativa miR1853-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 aatgct 6
||||||
Sbjct: 6 aatgct 1
>cfa-miR-338 MIMAT0006739 Canis familiaris miR-338
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 atgctg 7
||||||
Sbjct: 8 atgctg 3
>cfa-miR-103 MIMAT0006687 Canis familiaris miR-103
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 atgctg 7
||||||
Sbjct: 8 atgctg 3
>cfa-miR-155 MIMAT0006671 Canis familiaris miR-155
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 aatgct 6
||||||
Sbjct: 3 aatgct 8
>cfa-miR-107 MIMAT0006666 Canis familiaris miR-107
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 atgctg 7
||||||
Sbjct: 8 atgctg 3
>mml-miR-628-5p MIMAT0006474 Macaca mulatta miR-628-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 atgctg 7
||||||
Sbjct: 1 atgctg 6
>mml-miR-338-3p MIMAT0006278 Macaca mulatta miR-338-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 atgctg 7
||||||
Sbjct: 8 atgctg 3
>mml-miR-155 MIMAT0006216 Macaca mulatta miR-155
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 aatgct 6
||||||
Sbjct: 3 aatgct 8
>gga-miR-1775-5p MIMAT0026784 Gallus gallus miR-1775-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 aatgct 6
||||||
Sbjct: 3 aatgct 8
>csa-miR-155 MIMAT0006131 Ciona savignyi miR-155
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 aatgct 6
||||||
Sbjct: 3 aatgct 8
>cin-miR-155 MIMAT0006105 Ciona intestinalis miR-155
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 aatgct 6
||||||
Sbjct: 3 aatgct 8
>oan-miR-1419e-5p MIMAT0007262 Ornithorhynchus anatinus
miR-1419e-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 atgctg 7
||||||
Sbjct: 1 atgctg 6
>oan-miR-107-3p MIMAT0007119 Ornithorhynchus anatinus miR-107-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 atgctg 7
||||||
Sbjct: 8 atgctg 3
>oan-miR-155-5p MIMAT0006988 Ornithorhynchus anatinus miR-155-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 aatgct 6
||||||
Sbjct: 3 aatgct 8
>oan-miR-103-3p MIMAT0006942 Ornithorhynchus anatinus miR-103-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 atgctg 7
||||||
Sbjct: 8 atgctg 3
>oan-miR-1344 MIMAT0006906 Ornithorhynchus anatinus miR-1344
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 atgctg 7
||||||
Sbjct: 3 atgctg 8
>ppt-miR1031b MIMAT0005134 Physcomitrella patens miR1031b
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 aatgct 6
||||||
Sbjct: 3 aatgct 8
>ppt-miR1031a MIMAT0005133 Physcomitrella patens miR1031a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 aatgct 6
||||||
Sbjct: 3 aatgct 8
>ath-miR862-3p MIMAT0004308 Arabidopsis thaliana miR862-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 atgctg 7
||||||
Sbjct: 3 atgctg 8
>mdo-miR-338 MIMAT0004136 Monodelphis domestica miR-338
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 atgctg 7
||||||
Sbjct: 8 atgctg 3
>mdo-miR-107 MIMAT0004100 Monodelphis domestica miR-107
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 atgctg 7
||||||
Sbjct: 8 atgctg 3
>mdo-miR-103-3p MIMAT0004099 Monodelphis domestica miR-103-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 atgctg 7
||||||
Sbjct: 8 atgctg 3
>sme-miR-1a-5p MIMAT0012090 Schmidtea mediterranea miR-1a-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 aatgct 6
||||||
Sbjct: 6 aatgct 1
>mdv1-miR-M4-5p MIMAT0003924 Mareks disease miR-M4-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 aatgct 6
||||||
Sbjct: 3 aatgct 8
>bta-miR-107 MIMAT0003785 Bos taurus miR-107
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 atgctg 7
||||||
Sbjct: 8 atgctg 3
>xtr-miR-338 MIMAT0003665 Xenopus tropicalis miR-338
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 atgctg 7
||||||
Sbjct: 8 atgctg 3
>xtr-miR-103 MIMAT0003663 Xenopus tropicalis miR-103
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 atgctg 7
||||||
Sbjct: 8 atgctg 3
>xtr-miR-155 MIMAT0003608 Xenopus tropicalis miR-155
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 aatgct 6
||||||
Sbjct: 3 aatgct 8
>xtr-miR-107 MIMAT0003584 Xenopus tropicalis miR-107
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 atgctg 7
||||||
Sbjct: 8 atgctg 3
>bta-miR-103 MIMAT0003521 Bos taurus miR-103
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 atgctg 7
||||||
Sbjct: 8 atgctg 3
>ebv-miR-BART14-3p MIMAT0003426 Epstein Barr miR-BART14-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 aatgct 6
||||||
Sbjct: 3 aatgct 8
>hsa-miR-628-5p MIMAT0004809 Homo sapiens miR-628-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 atgctg 7
||||||
Sbjct: 1 atgctg 6
>tni-miR-107 MIMAT0003044 Tetraodon nigroviridis miR-107
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 atgctg 7
||||||
Sbjct: 8 atgctg 3
>fru-miR-107 MIMAT0003043 Fugu rubripes miR-107
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 atgctg 7
||||||
Sbjct: 8 atgctg 3
>tni-miR-103 MIMAT0003042 Tetraodon nigroviridis miR-103
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 atgctg 7
||||||
Sbjct: 8 atgctg 3
>fru-miR-103 MIMAT0003041 Fugu rubripes miR-103
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 atgctg 7
||||||
Sbjct: 8 atgctg 3
>tni-miR-338 MIMAT0003008 Tetraodon nigroviridis miR-338
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 atgctg 7
||||||
Sbjct: 8 atgctg 3
>fru-miR-338 MIMAT0003007 Fugu rubripes miR-338
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 atgctg 7
||||||
Sbjct: 8 atgctg 3
>ppa-miR-107 MIMAT0002464 Pan paniscus miR-107
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 atgctg 7
||||||
Sbjct: 8 atgctg 3
>mne-miR-107 MIMAT0002463 Macaca nemestrina miR-107
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 atgctg 7
||||||
Sbjct: 8 atgctg 3
>lla-miR-107 MIMAT0002462 Lagothrix lagotricha miR-107
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 atgctg 7
||||||
Sbjct: 8 atgctg 3
>ppy-miR-107 MIMAT0002461 Pongo pygmaeus miR-107
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 atgctg 7
||||||
Sbjct: 8 atgctg 3
>ggo-miR-107 MIMAT0002460 Gorilla gorilla miR-107
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 atgctg 7
||||||
Sbjct: 8 atgctg 3
>ptr-miR-107 MIMAT0002459 Pan troglodytes miR-107
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 atgctg 7
||||||
Sbjct: 8 atgctg 3
>mml-miR-107-3p MIMAT0002458 Macaca mulatta miR-107-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 atgctg 7
||||||
Sbjct: 8 atgctg 3
>mne-miR-103 MIMAT0002449 Macaca nemestrina miR-103
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 atgctg 7
||||||
Sbjct: 8 atgctg 3
>lla-miR-103 MIMAT0002448 Lagothrix lagotricha miR-103
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 atgctg 7
||||||
Sbjct: 8 atgctg 3
>mml-miR-103-3p MIMAT0002447 Macaca mulatta miR-103-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 atgctg 7
||||||
Sbjct: 8 atgctg 3
>ptr-miR-103 MIMAT0002446 Pan troglodytes miR-103
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 atgctg 7
||||||
Sbjct: 8 atgctg 3
>ppy-miR-103 MIMAT0002445 Pongo pygmaeus miR-103
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 atgctg 7
||||||
Sbjct: 8 atgctg 3
>ppa-miR-103 MIMAT0002444 Pan paniscus miR-103
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 atgctg 7
||||||
Sbjct: 8 atgctg 3
>ggo-miR-103 MIMAT0002443 Gorilla gorilla miR-103
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 atgctg 7
||||||
Sbjct: 8 atgctg 3
>age-miR-103 MIMAT0002442 Ateles geoffroyi miR-103
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 atgctg 7
||||||
Sbjct: 8 atgctg 3
>kshv-miR-K12-11-3p MIMAT0002181 Kaposi sarcoma-associated
miR-K12-11-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 aatgct 6
||||||
Sbjct: 3 aatgct 8
>ssc-miR-107 MIMAT0002155 Sus scrofa miR-107
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 atgctg 7
||||||
Sbjct: 8 atgctg 3
>ssc-miR-103 MIMAT0002154 Sus scrofa miR-103
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 atgctg 7
||||||
Sbjct: 8 atgctg 3
>dre-miR-338 MIMAT0001873 Danio rerio miR-338
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 atgctg 7
||||||
Sbjct: 8 atgctg 3
>dre-miR-155 MIMAT0001851 Danio rerio miR-155
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 aatgct 6
||||||
Sbjct: 3 aatgct 8
>dre-miR-107a-3p MIMAT0001817 Danio rerio miR-107a-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 atgctg 7
||||||
Sbjct: 8 atgctg 3
>dre-miR-103 MIMAT0001816 Danio rerio miR-103
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 atgctg 7
||||||
Sbjct: 8 atgctg 3
>gga-miR-107-3p MIMAT0001147 Gallus gallus miR-107-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 atgctg 7
||||||
Sbjct: 8 atgctg 3
>gga-miR-103-3p MIMAT0001145 Gallus gallus miR-103-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 atgctg 7
||||||
Sbjct: 8 atgctg 3
>gga-miR-155 MIMAT0001106 Gallus gallus miR-155
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 aatgct 6
||||||
Sbjct: 3 aatgct 8
>rno-miR-107-3p MIMAT0000826 Rattus norvegicus miR-107-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 atgctg 7
||||||
Sbjct: 8 atgctg 3
>rno-miR-103-3p MIMAT0000824 Rattus norvegicus miR-103-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 atgctg 7
||||||
Sbjct: 8 atgctg 3
>cel-miR-392-5p MIMAT0020344 Caenorhabditis elegans miR-392-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 aatgct 6
||||||
Sbjct: 6 aatgct 1
>hsa-miR-338-3p MIMAT0000763 Homo sapiens miR-338-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 atgctg 7
||||||
Sbjct: 8 atgctg 3
>mmu-miR-107-3p MIMAT0000647 Mus musculus miR-107-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 atgctg 7
||||||
Sbjct: 8 atgctg 3
>hsa-miR-155-5p MIMAT0000646 Homo sapiens miR-155-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 aatgct 6
||||||
Sbjct: 3 aatgct 8
>mmu-miR-338-3p MIMAT0000582 Mus musculus miR-338-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 atgctg 7
||||||
Sbjct: 8 atgctg 3
>rno-miR-338-3p MIMAT0000581 Rattus norvegicus miR-338-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 atgctg 7
||||||
Sbjct: 8 atgctg 3
>mmu-miR-103-3p MIMAT0000546 Mus musculus miR-103-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 atgctg 7
||||||
Sbjct: 8 atgctg 3
>mmu-miR-155-5p MIMAT0000165 Mus musculus miR-155-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 aatgct 6
||||||
Sbjct: 3 aatgct 8
>hsa-miR-107 MIMAT0000104 Homo sapiens miR-107
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 atgctg 7
||||||
Sbjct: 8 atgctg 3
>hsa-miR-103a-3p MIMAT0000101 Homo sapiens miR-103a-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 atgctg 7
||||||
Sbjct: 8 atgctg 3
Database: /home/users/abid/BLAST/MIRBASE
Posted date: Sep 2, 2014 3:58 PM
Number of letters in database: 286,624
Number of sequences in database: 35,828
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 35828
Number of Hits to DB: 246
Number of extensions: 238
Number of successful extensions: 188
Number of sequences better than 100.0: 188
Number of HSP's gapped: 188
Number of HSP's successfully gapped: 188
Length of query: 7
Length of database: 286,624
Length adjustment: 4
Effective length of query: 3
Effective length of database: 143,312
Effective search space: 429936
Effective search space used: 429936
X1: 5 ( 9.9 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 5 (10.4 bits)
S2: 6 (12.4 bits)
