BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rcmv-miR-R90-1
         (7 letters)

Database: /home/users/abid/BLAST/MIRBASE 
           35,828 sequences; 286,624 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

mmu-miR-7059-5p MIMAT0028022 Mus musculus miR-7059-5p                  14      20
hsa-miR-4783-3p MIMAT0019947 Homo sapiens miR-4783-3p                  14      20
hsa-miR-4655-5p MIMAT0019721 Homo sapiens miR-4655-5p                  14      20
gsa-miR-36-3p MIMAT0035259 Gyrodactylus salaris miR-36-3p              12      80
dme-miR-9382-3p MIMAT0035228 Drosophila melanogaster miR-9382-3p       12      80
eca-miR-8908i MIMAT0034719 Equus caballus miR-8908i                    12      80
sma-miR-8457-3p MIMAT0033627 Schistosoma mansoni miR-8457-3p           12      80
sma-miR-36b-3p MIMAT0033515 Schistosoma mansoni miR-36b-3p             12      80
str-miR-37b-3p MIMAT0033467 Strongyloides ratti miR-37b-3p             12      80
str-miR-8393-3p MIMAT0033459 Strongyloides ratti miR-8393-3p           12      80
str-miR-37a-3p MIMAT0033455 Strongyloides ratti miR-37a-3p             12      80
str-miR-40-3p MIMAT0033437 Strongyloides ratti miR-40-3p               12      80
ppc-miR-2235a-9-3p MIMAT0033233 Pristionchus pacificus miR-2235a...    12      80
ppc-miR-8340-3p MIMAT0033226 Pristionchus pacificus miR-8340-3p        12      80
ppc-miR-8283-3p MIMAT0033070 Pristionchus pacificus miR-8283-3p        12      80
ppc-miR-2235a-11-3p MIMAT0033034 Pristionchus pacificus miR-2235...    12      80
ppc-miR-2235d-3p MIMAT0032953 Pristionchus pacificus miR-2235d-3p      12      80
ppc-miR-2235c-3p MIMAT0032951 Pristionchus pacificus miR-2235c-3p      12      80
ppc-miR-8243-5p MIMAT0032946 Pristionchus pacificus miR-8243-5p        12      80
ppc-miR-8232-3p MIMAT0032913 Pristionchus pacificus miR-8232-3p        12      80
ppc-miR-42c-3p MIMAT0032889 Pristionchus pacificus miR-42c-3p          12      80
ppc-miR-36-3p MIMAT0032883 Pristionchus pacificus miR-36-3p            12      80
ppc-miR-2235b-3p MIMAT0032851 Pristionchus pacificus miR-2235b-3p      12      80
bma-miR-36a MIMAT0031749 Brugia malayi miR-36a                         12      80
mmu-miR-8111 MIMAT0031417 Mus musculus miR-8111                        12      80
prd-miR-39-3p MIMAT0030813 Panagrellus redivivus miR-39-3p             12      80
prd-miR-35a-3p MIMAT0030715 Panagrellus redivivus miR-35a-3p           12      80
prd-miR-40-3p MIMAT0030681 Panagrellus redivivus miR-40-3p             12      80
prd-miR-37-3p MIMAT0030567 Panagrellus redivivus miR-37-3p             12      80
prd-miR-7940b-3p MIMAT0030557 Panagrellus redivivus miR-7940b-3p       12      80
prd-miR-36-3p MIMAT0030531 Panagrellus redivivus miR-36-3p             12      80
prd-miR-35b-3p MIMAT0030511 Panagrellus redivivus miR-35b-3p           12      80
bdi-miR7768b-5p MIMAT0030286 Brachypodium distachyon miR7768b-5p       12      80
bdi-miR7768a-5p MIMAT0030284 Brachypodium distachyon miR7768a-5p       12      80
cbn-miR-35n MIMAT0029941 Caenorhabditis brenneri miR-35n               12      80
cbn-miR-35m MIMAT0029940 Caenorhabditis brenneri miR-35m               12      80
cbn-miR-35l MIMAT0029939 Caenorhabditis brenneri miR-35l               12      80
cbn-miR-35k MIMAT0029938 Caenorhabditis brenneri miR-35k               12      80
cbn-miR-35j MIMAT0029937 Caenorhabditis brenneri miR-35j               12      80
cbn-miR-35i MIMAT0029936 Caenorhabditis brenneri miR-35i               12      80
cbn-miR-35h MIMAT0029935 Caenorhabditis brenneri miR-35h               12      80
cbn-miR-35g MIMAT0029934 Caenorhabditis brenneri miR-35g               12      80
cbn-miR-35f MIMAT0029933 Caenorhabditis brenneri miR-35f               12      80
cbn-miR-35e MIMAT0029932 Caenorhabditis brenneri miR-35e               12      80
cbn-miR-35d MIMAT0029931 Caenorhabditis brenneri miR-35d               12      80
cbn-miR-35c MIMAT0029930 Caenorhabditis brenneri miR-35c               12      80
cbn-miR-35b MIMAT0029929 Caenorhabditis brenneri miR-35b               12      80
cbn-miR-35a MIMAT0029928 Caenorhabditis brenneri miR-35a               12      80
cbn-miR-36 MIMAT0029927 Caenorhabditis brenneri miR-36                 12      80
cbn-miR-38 MIMAT0029926 Caenorhabditis brenneri miR-38                 12      80
cbn-miR-39 MIMAT0029925 Caenorhabditis brenneri miR-39                 12      80
crm-miR-35i MIMAT0029924 Caenorhabditis remanei miR-35i                12      80
crm-miR-36 MIMAT0029921 Caenorhabditis remanei miR-36                  12      80
crm-miR-35h MIMAT0029920 Caenorhabditis remanei miR-35h                12      80
cbr-miR-35g MIMAT0029919 Caenorhabditis briggsae miR-35g               12      80
cbr-miR-35f MIMAT0029918 Caenorhabditis briggsae miR-35f               12      80
sbi-miR6221-3p MIMAT0026409 Sorghum bicolor miR6221-3p                 12      80
sbi-miR6219-5p MIMAT0026402 Sorghum bicolor miR6219-5p                 12      80
mmu-miR-7003-3p MIMAT0027911 Mus musculus miR-7003-3p                  12      80
hsa-miR-6840-5p MIMAT0027582 Homo sapiens miR-6840-5p                  12      80
hsa-miR-6763-3p MIMAT0027427 Homo sapiens miR-6763-3p                  12      80
prv-miR-LLT7 MIMAT0025310 Pseudorabies virus miR-LLT7                  12      80
sma-miR-36a-3p MIMAT0025041 Schistosoma mansoni miR-36a-3p             12      80
hco-miR-40a MIMAT0023444 Haemonchus contortus miR-40a                  12      80
hco-miR-40d MIMAT0023430 Haemonchus contortus miR-40d                  12      80
hco-miR-40c MIMAT0023429 Haemonchus contortus miR-40c                  12      80
hco-miR-40b MIMAT0023323 Haemonchus contortus miR-40b                  12      80
tur-miR-5730-5p MIMAT0023050 Tetranychus urticae miR-5730-5p           12      80
asu-miR-5348-3p MIMAT0021549 Ascaris suum miR-5348-3p                  12      80
asu-miR-36f-3p MIMAT0021547 Ascaris suum miR-36f-3p                    12      80
asu-miR-36e-3p MIMAT0021448 Ascaris suum miR-36e-3p                    12      80
asu-miR-36d-3p MIMAT0021446 Ascaris suum miR-36d-3p                    12      80
asu-miR-36c-3p MIMAT0021444 Ascaris suum miR-36c-3p                    12      80
asu-miR-36b-3p MIMAT0021442 Ascaris suum miR-36b-3p                    12      80
asu-miR-36a-3p MIMAT0021440 Ascaris suum miR-36a-3p                    12      80
rmi-miR-5316b MIMAT0021388 Rhipicephalus microplus miR-5316b           12      80
hsa-miR-5090 MIMAT0021082 Homo sapiens miR-5090                        12      80
bfl-miR-4903 MIMAT0020498 Branchiostoma floridae miR-4903              12      80
bfl-miR-4872b MIMAT0020115 Branchiostoma floridae miR-4872b            12      80
hsa-miR-4532 MIMAT0019071 Homo sapiens miR-4532                        12      80
tca-miR-3791-3p MIMAT0018883 Tribolium castaneum miR-3791-3p           12      80
ame-miR-3791 MIMAT0018570 Apis mellifera miR-3791                      12      80
cin-miR-4053-5p MIMAT0016595 Ciona intestinalis miR-4053-5p            12      80
sja-miR-36-3p MIMAT0016258 Schistosoma japonicum miR-36-3p             12      80
hsv1-miR-H15 MIMAT0014693 Herpes Simplex miR-H15                       12      80
tgu-miR-2992 MIMAT0014549 Taeniopygia guttata miR-2992                 12      80
bta-miR-2889 MIMAT0013847 Bos taurus miR-2889                          12      80
bmo-miR-2724 MIMAT0012600 Bombyx mori miR-2724                         12      80
hsv1-miR-H8-3p MIMAT0012598 Herpes Simplex miR-H8-3p                   12      80
cte-miR-36 MIMAT0013530 Capitella teleta miR-36                        12      80
ppc-miR-2251a MIMAT0011720 Pristionchus pacificus miR-2251a            12      80
ppc-miR-38 MIMAT0011714 Pristionchus pacificus miR-38                  12      80
ppc-miR-2240a MIMAT0011690 Pristionchus pacificus miR-2240a            12      80
ppc-miR-2235a-3p MIMAT0011681 Pristionchus pacificus miR-2235a-3p      12      80
ppc-miR-42b MIMAT0011654 Pristionchus pacificus miR-42b                12      80
ppc-miR-37 MIMAT0011647 Pristionchus pacificus miR-37                  12      80
ppc-miR-42a MIMAT0011641 Pristionchus pacificus miR-42a                12      80
crm-miR-35g MIMAT0011605 Caenorhabditis remanei miR-35g                12      80
crm-miR-38 MIMAT0011603 Caenorhabditis remanei miR-38                  12      80
crm-miR-42 MIMAT0011532 Caenorhabditis remanei miR-42                  12      80
crm-miR-35f MIMAT0011514 Caenorhabditis remanei miR-35f                12      80
crm-miR-35e MIMAT0011513 Caenorhabditis remanei miR-35e                12      80
crm-miR-35d MIMAT0011739 Caenorhabditis remanei miR-35d                12      80
crm-miR-35c-3p MIMAT0011512 Caenorhabditis remanei miR-35c-3p          12      80
crm-miR-35b MIMAT0011511 Caenorhabditis remanei miR-35b                12      80
crm-miR-35a MIMAT0011510 Caenorhabditis remanei miR-35a                12      80
crm-miR-39 MIMAT0011506 Caenorhabditis remanei miR-39                  12      80
crm-miR-40 MIMAT0011505 Caenorhabditis remanei miR-40                  12      80
crm-miR-41 MIMAT0011504 Caenorhabditis remanei miR-41                  12      80
cbr-miR-41b MIMAT0011489 Caenorhabditis briggsae miR-41b               12      80
cbr-miR-35b MIMAT0011483 Caenorhabditis briggsae miR-35b               12      80
cbr-miR-35d-3p MIMAT0011470 Caenorhabditis briggsae miR-35d-3p         12      80
cbr-miR-35e MIMAT0011468 Caenorhabditis briggsae miR-35e               12      80
cbr-miR-35c MIMAT0011467 Caenorhabditis briggsae miR-35c               12      80
sme-miR-36c-3p MIMAT0011261 Schmidtea mediterranea miR-36c-3p          12      80
sme-miR-36b-3p MIMAT0011242 Schmidtea mediterranea miR-36b-3p          12      80
hsa-miR-1247-3p MIMAT0022721 Homo sapiens miR-1247-3p                  12      80
rno-miR-181d-3p MIMAT0017296 Rattus norvegicus miR-181d-3p             12      80
sme-miR-36a-3p MIMAT0003982 Schmidtea mediterranea miR-36a-3p          12      80
hsa-miR-181d-3p MIMAT0026608 Homo sapiens miR-181d-3p                  12      80
cbr-miR-41a MIMAT0001318 Caenorhabditis briggsae miR-41a               12      80
cbr-miR-40 MIMAT0001317 Caenorhabditis briggsae miR-40                 12      80
cbr-miR-39 MIMAT0001316 Caenorhabditis briggsae miR-39                 12      80
cbr-miR-38 MIMAT0001315 Caenorhabditis briggsae miR-38                 12      80
cbr-miR-36 MIMAT0001314 Caenorhabditis briggsae miR-36                 12      80
cbr-miR-35a MIMAT0001313 Caenorhabditis briggsae miR-35a               12      80
cel-miR-42-3p MIMAT0000013 Caenorhabditis elegans miR-42-3p            12      80
cel-miR-41-3p MIMAT0000012 Caenorhabditis elegans miR-41-3p            12      80
cel-miR-40-3p MIMAT0000011 Caenorhabditis elegans miR-40-3p            12      80
cel-miR-39-3p MIMAT0000010 Caenorhabditis elegans miR-39-3p            12      80
cel-miR-38-3p MIMAT0000009 Caenorhabditis elegans miR-38-3p            12      80
cel-miR-37-3p MIMAT0000008 Caenorhabditis elegans miR-37-3p            12      80
cel-miR-36-3p MIMAT0000007 Caenorhabditis elegans miR-36-3p            12      80
cel-miR-35-3p MIMAT0000006 Caenorhabditis elegans miR-35-3p            12      80
>mmu-miR-7059-5p MIMAT0028022 Mus musculus miR-7059-5p
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 accgggg 7
         |||||||
Sbjct: 1 accgggg 7
>hsa-miR-4783-3p MIMAT0019947 Homo sapiens miR-4783-3p
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Minus

                
Query: 1 accgggg 7
         |||||||
Sbjct: 7 accgggg 1
>hsa-miR-4655-5p MIMAT0019721 Homo sapiens miR-4655-5p
          Length = 8

 Score = 14.4 bits (7), Expect =    20
 Identities = 7/7 (100%)
 Strand = Plus / Plus

                
Query: 1 accgggg 7
         |||||||
Sbjct: 2 accgggg 8
>gsa-miR-36-3p MIMAT0035259 Gyrodactylus salaris miR-36-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 accggg 6
         ||||||
Sbjct: 3 accggg 8
>dme-miR-9382-3p MIMAT0035228 Drosophila melanogaster
         miR-9382-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 ccgggg 7
         ||||||
Sbjct: 8 ccgggg 3
>eca-miR-8908i MIMAT0034719 Equus caballus miR-8908i
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 accggg 6
         ||||||
Sbjct: 8 accggg 3
>sma-miR-8457-3p MIMAT0033627 Schistosoma mansoni miR-8457-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 accggg 6
         ||||||
Sbjct: 3 accggg 8
>sma-miR-36b-3p MIMAT0033515 Schistosoma mansoni miR-36b-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 accggg 6
         ||||||
Sbjct: 3 accggg 8
>str-miR-37b-3p MIMAT0033467 Strongyloides ratti miR-37b-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 accggg 6
         ||||||
Sbjct: 3 accggg 8
>str-miR-8393-3p MIMAT0033459 Strongyloides ratti miR-8393-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 accggg 6
         ||||||
Sbjct: 3 accggg 8
>str-miR-37a-3p MIMAT0033455 Strongyloides ratti miR-37a-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 accggg 6
         ||||||
Sbjct: 3 accggg 8
>str-miR-40-3p MIMAT0033437 Strongyloides ratti miR-40-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 accggg 6
         ||||||
Sbjct: 3 accggg 8
>ppc-miR-2235a-9-3p MIMAT0033233 Pristionchus pacificus
         miR-2235a-9-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 accggg 6
         ||||||
Sbjct: 3 accggg 8
>ppc-miR-8340-3p MIMAT0033226 Pristionchus pacificus miR-8340-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 accggg 6
         ||||||
Sbjct: 3 accggg 8
>ppc-miR-8283-3p MIMAT0033070 Pristionchus pacificus miR-8283-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 accggg 6
         ||||||
Sbjct: 3 accggg 8
>ppc-miR-2235a-11-3p MIMAT0033034 Pristionchus pacificus
         miR-2235a-11-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 accggg 6
         ||||||
Sbjct: 3 accggg 8
>ppc-miR-2235d-3p MIMAT0032953 Pristionchus pacificus
         miR-2235d-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 accggg 6
         ||||||
Sbjct: 3 accggg 8
>ppc-miR-2235c-3p MIMAT0032951 Pristionchus pacificus
         miR-2235c-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 accggg 6
         ||||||
Sbjct: 3 accggg 8
>ppc-miR-8243-5p MIMAT0032946 Pristionchus pacificus miR-8243-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 accggg 6
         ||||||
Sbjct: 3 accggg 8
>ppc-miR-8232-3p MIMAT0032913 Pristionchus pacificus miR-8232-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 accggg 6
         ||||||
Sbjct: 3 accggg 8
>ppc-miR-42c-3p MIMAT0032889 Pristionchus pacificus miR-42c-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 accggg 6
         ||||||
Sbjct: 3 accggg 8
>ppc-miR-36-3p MIMAT0032883 Pristionchus pacificus miR-36-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 accggg 6
         ||||||
Sbjct: 3 accggg 8
>ppc-miR-2235b-3p MIMAT0032851 Pristionchus pacificus
         miR-2235b-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 accggg 6
         ||||||
Sbjct: 3 accggg 8
>bma-miR-36a MIMAT0031749 Brugia malayi miR-36a
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 accggg 6
         ||||||
Sbjct: 3 accggg 8
>mmu-miR-8111 MIMAT0031417 Mus musculus miR-8111
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 accggg 6
         ||||||
Sbjct: 1 accggg 6
>prd-miR-39-3p MIMAT0030813 Panagrellus redivivus miR-39-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 accggg 6
         ||||||
Sbjct: 3 accggg 8
>prd-miR-35a-3p MIMAT0030715 Panagrellus redivivus miR-35a-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 accggg 6
         ||||||
Sbjct: 3 accggg 8
>prd-miR-40-3p MIMAT0030681 Panagrellus redivivus miR-40-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 accggg 6
         ||||||
Sbjct: 3 accggg 8
>prd-miR-37-3p MIMAT0030567 Panagrellus redivivus miR-37-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 accggg 6
         ||||||
Sbjct: 3 accggg 8
>prd-miR-7940b-3p MIMAT0030557 Panagrellus redivivus
         miR-7940b-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 accggg 6
         ||||||
Sbjct: 3 accggg 8
>prd-miR-36-3p MIMAT0030531 Panagrellus redivivus miR-36-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 accggg 6
         ||||||
Sbjct: 3 accggg 8
>prd-miR-35b-3p MIMAT0030511 Panagrellus redivivus miR-35b-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 accggg 6
         ||||||
Sbjct: 3 accggg 8
>bdi-miR7768b-5p MIMAT0030286 Brachypodium distachyon
         miR7768b-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 accggg 6
         ||||||
Sbjct: 6 accggg 1
>bdi-miR7768a-5p MIMAT0030284 Brachypodium distachyon
         miR7768a-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 1 accggg 6
         ||||||
Sbjct: 6 accggg 1
>cbn-miR-35n MIMAT0029941 Caenorhabditis brenneri miR-35n
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 accggg 6
         ||||||
Sbjct: 3 accggg 8
>cbn-miR-35m MIMAT0029940 Caenorhabditis brenneri miR-35m
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 accggg 6
         ||||||
Sbjct: 3 accggg 8
>cbn-miR-35l MIMAT0029939 Caenorhabditis brenneri miR-35l
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 accggg 6
         ||||||
Sbjct: 3 accggg 8
>cbn-miR-35k MIMAT0029938 Caenorhabditis brenneri miR-35k
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 accggg 6
         ||||||
Sbjct: 3 accggg 8
>cbn-miR-35j MIMAT0029937 Caenorhabditis brenneri miR-35j
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 accggg 6
         ||||||
Sbjct: 3 accggg 8
>cbn-miR-35i MIMAT0029936 Caenorhabditis brenneri miR-35i
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 accggg 6
         ||||||
Sbjct: 3 accggg 8
>cbn-miR-35h MIMAT0029935 Caenorhabditis brenneri miR-35h
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 accggg 6
         ||||||
Sbjct: 3 accggg 8
>cbn-miR-35g MIMAT0029934 Caenorhabditis brenneri miR-35g
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 accggg 6
         ||||||
Sbjct: 3 accggg 8
>cbn-miR-35f MIMAT0029933 Caenorhabditis brenneri miR-35f
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 accggg 6
         ||||||
Sbjct: 3 accggg 8
>cbn-miR-35e MIMAT0029932 Caenorhabditis brenneri miR-35e
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 accggg 6
         ||||||
Sbjct: 3 accggg 8
>cbn-miR-35d MIMAT0029931 Caenorhabditis brenneri miR-35d
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 accggg 6
         ||||||
Sbjct: 3 accggg 8
>cbn-miR-35c MIMAT0029930 Caenorhabditis brenneri miR-35c
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 accggg 6
         ||||||
Sbjct: 3 accggg 8
>cbn-miR-35b MIMAT0029929 Caenorhabditis brenneri miR-35b
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 accggg 6
         ||||||
Sbjct: 3 accggg 8
>cbn-miR-35a MIMAT0029928 Caenorhabditis brenneri miR-35a
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 accggg 6
         ||||||
Sbjct: 3 accggg 8
>cbn-miR-36 MIMAT0029927 Caenorhabditis brenneri miR-36
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 accggg 6
         ||||||
Sbjct: 3 accggg 8
>cbn-miR-38 MIMAT0029926 Caenorhabditis brenneri miR-38
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 accggg 6
         ||||||
Sbjct: 3 accggg 8
>cbn-miR-39 MIMAT0029925 Caenorhabditis brenneri miR-39
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 accggg 6
         ||||||
Sbjct: 3 accggg 8
>crm-miR-35i MIMAT0029924 Caenorhabditis remanei miR-35i
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 accggg 6
         ||||||
Sbjct: 3 accggg 8
>crm-miR-36 MIMAT0029921 Caenorhabditis remanei miR-36
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 accggg 6
         ||||||
Sbjct: 3 accggg 8
>crm-miR-35h MIMAT0029920 Caenorhabditis remanei miR-35h
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 accggg 6
         ||||||
Sbjct: 3 accggg 8
>cbr-miR-35g MIMAT0029919 Caenorhabditis briggsae miR-35g
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 accggg 6
         ||||||
Sbjct: 3 accggg 8
>cbr-miR-35f MIMAT0029918 Caenorhabditis briggsae miR-35f
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 accggg 6
         ||||||
Sbjct: 3 accggg 8
>sbi-miR6221-3p MIMAT0026409 Sorghum bicolor miR6221-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 ccgggg 7
         ||||||
Sbjct: 1 ccgggg 6
>sbi-miR6219-5p MIMAT0026402 Sorghum bicolor miR6219-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 accggg 6
         ||||||
Sbjct: 3 accggg 8
>mmu-miR-7003-3p MIMAT0027911 Mus musculus miR-7003-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 ccgggg 7
         ||||||
Sbjct: 6 ccgggg 1
>hsa-miR-6840-5p MIMAT0027582 Homo sapiens miR-6840-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 ccgggg 7
         ||||||
Sbjct: 8 ccgggg 3
>hsa-miR-6763-3p MIMAT0027427 Homo sapiens miR-6763-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 ccgggg 7
         ||||||
Sbjct: 8 ccgggg 3
>prv-miR-LLT7 MIMAT0025310 Pseudorabies virus miR-LLT7
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 ccgggg 7
         ||||||
Sbjct: 1 ccgggg 6
>sma-miR-36a-3p MIMAT0025041 Schistosoma mansoni miR-36a-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 accggg 6
         ||||||
Sbjct: 3 accggg 8
>hco-miR-40a MIMAT0023444 Haemonchus contortus miR-40a
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 accggg 6
         ||||||
Sbjct: 3 accggg 8
>hco-miR-40d MIMAT0023430 Haemonchus contortus miR-40d
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 accggg 6
         ||||||
Sbjct: 3 accggg 8
>hco-miR-40c MIMAT0023429 Haemonchus contortus miR-40c
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 accggg 6
         ||||||
Sbjct: 3 accggg 8
>hco-miR-40b MIMAT0023323 Haemonchus contortus miR-40b
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 accggg 6
         ||||||
Sbjct: 3 accggg 8
>tur-miR-5730-5p MIMAT0023050 Tetranychus urticae miR-5730-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 accggg 6
         ||||||
Sbjct: 3 accggg 8
>asu-miR-5348-3p MIMAT0021549 Ascaris suum miR-5348-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 accggg 6
         ||||||
Sbjct: 3 accggg 8
>asu-miR-36f-3p MIMAT0021547 Ascaris suum miR-36f-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 accggg 6
         ||||||
Sbjct: 3 accggg 8
>asu-miR-36e-3p MIMAT0021448 Ascaris suum miR-36e-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 accggg 6
         ||||||
Sbjct: 3 accggg 8
>asu-miR-36d-3p MIMAT0021446 Ascaris suum miR-36d-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 accggg 6
         ||||||
Sbjct: 3 accggg 8
>asu-miR-36c-3p MIMAT0021444 Ascaris suum miR-36c-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 accggg 6
         ||||||
Sbjct: 3 accggg 8
>asu-miR-36b-3p MIMAT0021442 Ascaris suum miR-36b-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 accggg 6
         ||||||
Sbjct: 3 accggg 8
>asu-miR-36a-3p MIMAT0021440 Ascaris suum miR-36a-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 accggg 6
         ||||||
Sbjct: 3 accggg 8
>rmi-miR-5316b MIMAT0021388 Rhipicephalus microplus miR-5316b
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 accggg 6
         ||||||
Sbjct: 3 accggg 8
>hsa-miR-5090 MIMAT0021082 Homo sapiens miR-5090
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 ccgggg 7
         ||||||
Sbjct: 1 ccgggg 6
>bfl-miR-4903 MIMAT0020498 Branchiostoma floridae miR-4903
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 ccgggg 7
         ||||||
Sbjct: 8 ccgggg 3
>bfl-miR-4872b MIMAT0020115 Branchiostoma floridae miR-4872b
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 ccgggg 7
         ||||||
Sbjct: 3 ccgggg 8
>hsa-miR-4532 MIMAT0019071 Homo sapiens miR-4532
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 ccgggg 7
         ||||||
Sbjct: 6 ccgggg 1

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 ccgggg 7
         ||||||
Sbjct: 3 ccgggg 8
>tca-miR-3791-3p MIMAT0018883 Tribolium castaneum miR-3791-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 accggg 6
         ||||||
Sbjct: 3 accggg 8
>ame-miR-3791 MIMAT0018570 Apis mellifera miR-3791
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 accggg 6
         ||||||
Sbjct: 3 accggg 8
>cin-miR-4053-5p MIMAT0016595 Ciona intestinalis miR-4053-5p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 2 ccgggg 7
         ||||||
Sbjct: 3 ccgggg 8
>sja-miR-36-3p MIMAT0016258 Schistosoma japonicum miR-36-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 accggg 6
         ||||||
Sbjct: 3 accggg 8
>hsv1-miR-H15 MIMAT0014693 Herpes Simplex miR-H15
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 ccgggg 7
         ||||||
Sbjct: 8 ccgggg 3
>tgu-miR-2992 MIMAT0014549 Taeniopygia guttata miR-2992
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 ccgggg 7
         ||||||
Sbjct: 6 ccgggg 1
>bta-miR-2889 MIMAT0013847 Bos taurus miR-2889
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 ccgggg 7
         ||||||
Sbjct: 8 ccgggg 3
>bmo-miR-2724 MIMAT0012600 Bombyx mori miR-2724
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 ccgggg 7
         ||||||
Sbjct: 8 ccgggg 3
>hsv1-miR-H8-3p MIMAT0012598 Herpes Simplex miR-H8-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Minus

               
Query: 2 ccgggg 7
         ||||||
Sbjct: 8 ccgggg 3
>cte-miR-36 MIMAT0013530 Capitella teleta miR-36
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 accggg 6
         ||||||
Sbjct: 3 accggg 8
>ppc-miR-2251a MIMAT0011720 Pristionchus pacificus miR-2251a
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 accggg 6
         ||||||
Sbjct: 3 accggg 8
>ppc-miR-38 MIMAT0011714 Pristionchus pacificus miR-38
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 accggg 6
         ||||||
Sbjct: 3 accggg 8
>ppc-miR-2240a MIMAT0011690 Pristionchus pacificus miR-2240a
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 accggg 6
         ||||||
Sbjct: 3 accggg 8
>ppc-miR-2235a-3p MIMAT0011681 Pristionchus pacificus
         miR-2235a-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 accggg 6
         ||||||
Sbjct: 3 accggg 8
>ppc-miR-42b MIMAT0011654 Pristionchus pacificus miR-42b
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 accggg 6
         ||||||
Sbjct: 3 accggg 8
>ppc-miR-37 MIMAT0011647 Pristionchus pacificus miR-37
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 accggg 6
         ||||||
Sbjct: 3 accggg 8
>ppc-miR-42a MIMAT0011641 Pristionchus pacificus miR-42a
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 accggg 6
         ||||||
Sbjct: 3 accggg 8
>crm-miR-35g MIMAT0011605 Caenorhabditis remanei miR-35g
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 accggg 6
         ||||||
Sbjct: 3 accggg 8
>crm-miR-38 MIMAT0011603 Caenorhabditis remanei miR-38
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 accggg 6
         ||||||
Sbjct: 3 accggg 8
>crm-miR-42 MIMAT0011532 Caenorhabditis remanei miR-42
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 accggg 6
         ||||||
Sbjct: 3 accggg 8
>crm-miR-35f MIMAT0011514 Caenorhabditis remanei miR-35f
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 accggg 6
         ||||||
Sbjct: 3 accggg 8
>crm-miR-35e MIMAT0011513 Caenorhabditis remanei miR-35e
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 accggg 6
         ||||||
Sbjct: 3 accggg 8
>crm-miR-35d MIMAT0011739 Caenorhabditis remanei miR-35d
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 accggg 6
         ||||||
Sbjct: 3 accggg 8
>crm-miR-35c-3p MIMAT0011512 Caenorhabditis remanei miR-35c-3p
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 accggg 6
         ||||||
Sbjct: 3 accggg 8
>crm-miR-35b MIMAT0011511 Caenorhabditis remanei miR-35b
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 accggg 6
         ||||||
Sbjct: 3 accggg 8
>crm-miR-35a MIMAT0011510 Caenorhabditis remanei miR-35a
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 accggg 6
         ||||||
Sbjct: 3 accggg 8
>crm-miR-39 MIMAT0011506 Caenorhabditis remanei miR-39
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 accggg 6
         ||||||
Sbjct: 3 accggg 8
>crm-miR-40 MIMAT0011505 Caenorhabditis remanei miR-40
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 accggg 6
         ||||||
Sbjct: 3 accggg 8
>crm-miR-41 MIMAT0011504 Caenorhabditis remanei miR-41
          Length = 8

 Score = 12.4 bits (6), Expect =    80
 Identities = 6/6 (100%)
 Strand = Plus / Plus

               
Query: 1 accggg 6
         ||||||
Sbjct: 3 accggg 8
>cbr-miR-41b MIMAT0011489 Caenorhabditis briggsae miR-41b
          Length = 8

 Score = 12.4 bits (6), Expect =