BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prv-miR-8-3p
(7 letters)
Database: /home/users/abid/BLAST/MIRBASE
35,828 sequences; 286,624 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ppc-miR-8251-5p MIMAT0032968 Pristionchus pacificus miR-8251-5p 14 20
prd-miR-7968-3p MIMAT0030839 Panagrellus redivivus miR-7968-3p 14 20
ame-miR-3478 MIMAT0037302 Apis mellifera miR-3478 12 80
tae-miR397-5p MIMAT0035795 Triticum aestivum miR397-5p 12 80
gsa-miR-36-3p MIMAT0035259 Gyrodactylus salaris miR-36-3p 12 80
efu-miR-582 MIMAT0035119 Eptesicus fuscus miR-582 12 80
sma-miR-8457-3p MIMAT0033627 Schistosoma mansoni miR-8457-3p 12 80
sma-miR-8454-3p MIMAT0033621 Schistosoma mansoni miR-8454-3p 12 80
str-miR-37b-3p MIMAT0033467 Strongyloides ratti miR-37b-3p 12 80
str-miR-8393-3p MIMAT0033459 Strongyloides ratti miR-8393-3p 12 80
str-miR-37a-3p MIMAT0033455 Strongyloides ratti miR-37a-3p 12 80
str-miR-8392-3p MIMAT0033453 Strongyloides ratti miR-8392-3p 12 80
str-miR-40-3p MIMAT0033437 Strongyloides ratti miR-40-3p 12 80
str-miR-8386-3p MIMAT0033433 Strongyloides ratti miR-8386-3p 12 80
ppc-miR-2235a-9-3p MIMAT0033233 Pristionchus pacificus miR-2235a... 12 80
ppc-miR-8283-3p MIMAT0033070 Pristionchus pacificus miR-8283-3p 12 80
ppc-miR-2235a-11-3p MIMAT0033034 Pristionchus pacificus miR-2235... 12 80
ppc-miR-2235a-10-3p MIMAT0033005 Pristionchus pacificus miR-2235... 12 80
ppc-miR-2235d-3p MIMAT0032953 Pristionchus pacificus miR-2235d-3p 12 80
ppc-miR-2235c-3p MIMAT0032951 Pristionchus pacificus miR-2235c-3p 12 80
ppc-miR-8243-5p MIMAT0032946 Pristionchus pacificus miR-8243-5p 12 80
ppc-miR-8232-3p MIMAT0032913 Pristionchus pacificus miR-8232-3p 12 80
ppc-miR-42c-3p MIMAT0032889 Pristionchus pacificus miR-42c-3p 12 80
ppc-miR-36-3p MIMAT0032883 Pristionchus pacificus miR-36-3p 12 80
ppc-miR-2235b-3p MIMAT0032851 Pristionchus pacificus miR-2235b-3p 12 80
ath-miR8176 MIMAT0032775 Arabidopsis thaliana miR8176 12 80
ssa-miR-731-3p MIMAT0032683 Salmo salar miR-731-3p 12 80
bma-miR-36a MIMAT0031749 Brugia malayi miR-36a 12 80
prd-miR-39-3p MIMAT0030813 Panagrellus redivivus miR-39-3p 12 80
prd-miR-35a-3p MIMAT0030715 Panagrellus redivivus miR-35a-3p 12 80
prd-miR-40-3p MIMAT0030681 Panagrellus redivivus miR-40-3p 12 80
prd-miR-37-3p MIMAT0030567 Panagrellus redivivus miR-37-3p 12 80
prd-miR-7940b-3p MIMAT0030557 Panagrellus redivivus miR-7940b-3p 12 80
prd-miR-35b-3p MIMAT0030511 Panagrellus redivivus miR-35b-3p 12 80
bdi-miR7775-5p MIMAT0030300 Brachypodium distachyon miR7775-5p 12 80
cbn-miR-35n MIMAT0029941 Caenorhabditis brenneri miR-35n 12 80
cbn-miR-35m MIMAT0029940 Caenorhabditis brenneri miR-35m 12 80
cbn-miR-35l MIMAT0029939 Caenorhabditis brenneri miR-35l 12 80
cbn-miR-35k MIMAT0029938 Caenorhabditis brenneri miR-35k 12 80
cbn-miR-35j MIMAT0029937 Caenorhabditis brenneri miR-35j 12 80
cbn-miR-35i MIMAT0029936 Caenorhabditis brenneri miR-35i 12 80
cbn-miR-35h MIMAT0029935 Caenorhabditis brenneri miR-35h 12 80
cbn-miR-35g MIMAT0029934 Caenorhabditis brenneri miR-35g 12 80
cbn-miR-35f MIMAT0029933 Caenorhabditis brenneri miR-35f 12 80
cbn-miR-35e MIMAT0029932 Caenorhabditis brenneri miR-35e 12 80
cbn-miR-35d MIMAT0029931 Caenorhabditis brenneri miR-35d 12 80
cbn-miR-35c MIMAT0029930 Caenorhabditis brenneri miR-35c 12 80
cbn-miR-35b MIMAT0029929 Caenorhabditis brenneri miR-35b 12 80
cbn-miR-35a MIMAT0029928 Caenorhabditis brenneri miR-35a 12 80
cbn-miR-38 MIMAT0029926 Caenorhabditis brenneri miR-38 12 80
cbn-miR-39 MIMAT0029925 Caenorhabditis brenneri miR-39 12 80
crm-miR-35i MIMAT0029924 Caenorhabditis remanei miR-35i 12 80
crm-miR-36 MIMAT0029921 Caenorhabditis remanei miR-36 12 80
crm-miR-35h MIMAT0029920 Caenorhabditis remanei miR-35h 12 80
cbr-miR-35g MIMAT0029919 Caenorhabditis briggsae miR-35g 12 80
cbr-miR-35f MIMAT0029918 Caenorhabditis briggsae miR-35f 12 80
lja-miR7523b MIMAT0029339 Lotus japonicus miR7523b 12 80
lja-miR7523a MIMAT0029338 Lotus japonicus miR7523a 12 80
ssc-miR-582 MIMAT0025380 Sus scrofa miR-582 12 80
mja-miR-6489-5p MIMAT0025296 Marsupenaeus japonicus miR-6489-5p 12 80
cgr-miR-181d-3p MIMAT0023804 Cricetulus griseus miR-181d-3p 12 80
hco-miR-40a MIMAT0023444 Haemonchus contortus miR-40a 12 80
hco-miR-40d MIMAT0023430 Haemonchus contortus miR-40d 12 80
hco-miR-40c MIMAT0023429 Haemonchus contortus miR-40c 12 80
hco-miR-40b MIMAT0023323 Haemonchus contortus miR-40b 12 80
tur-miR-5730-5p MIMAT0023050 Tetranychus urticae miR-5730-5p 12 80
asu-miR-5348-3p MIMAT0021549 Ascaris suum miR-5348-3p 12 80
asu-miR-36f-3p MIMAT0021547 Ascaris suum miR-36f-3p 12 80
asu-miR-36e-3p MIMAT0021448 Ascaris suum miR-36e-3p 12 80
asu-miR-36d-3p MIMAT0021446 Ascaris suum miR-36d-3p 12 80
asu-miR-36c-3p MIMAT0021444 Ascaris suum miR-36c-3p 12 80
asu-miR-36b-3p MIMAT0021442 Ascaris suum miR-36b-3p 12 80
asu-miR-36a-3p MIMAT0021440 Ascaris suum miR-36a-3p 12 80
rmi-miR-5316b MIMAT0021388 Rhipicephalus microplus miR-5316b 12 80
rmi-miR-5316a MIMAT0021387 Rhipicephalus microplus miR-5316a 12 80
gma-miR169i-3p MIMAT0021068 Glycine max miR169i-3p 12 80
ath-miR5027 MIMAT0020533 Arabidopsis thaliana miR5027 12 80
hsa-miR-4783-3p MIMAT0019947 Homo sapiens miR-4783-3p 12 80
hsa-miR-4655-5p MIMAT0019721 Homo sapiens miR-4655-5p 12 80
tca-miR-3791-3p MIMAT0018883 Tribolium castaneum miR-3791-3p 12 80
ame-miR-3791 MIMAT0018570 Apis mellifera miR-3791 12 80
rlcv-miR-rL1-35-5p MIMAT0016962 Rhesus lymphocryptovirus miR-rL1... 12 80
bma-miR-36b MIMAT0014103 Brugia malayi miR-36b 12 80
bma-miR-36c MIMAT0014102 Brugia malayi miR-36c 12 80
rlcv-miR-rL1-30-5p MIMAT0019195 Rhesus lymphocryptovirus miR-rL1... 12 80
eca-miR-582-3p MIMAT0013104 Equus caballus miR-582-3p 12 80
hvt-miR-H7-3p MIMAT0012719 Herpesvirus of miR-H7-3p 12 80
cte-miR-36 MIMAT0013530 Capitella teleta miR-36 12 80
ppc-miR-2251a MIMAT0011720 Pristionchus pacificus miR-2251a 12 80
ppc-miR-38 MIMAT0011714 Pristionchus pacificus miR-38 12 80
ppc-miR-2240a MIMAT0011690 Pristionchus pacificus miR-2240a 12 80
ppc-miR-2235a-3p MIMAT0011681 Pristionchus pacificus miR-2235a-3p 12 80
ppc-miR-42b MIMAT0011654 Pristionchus pacificus miR-42b 12 80
ppc-miR-37 MIMAT0011647 Pristionchus pacificus miR-37 12 80
ppc-miR-42a MIMAT0011641 Pristionchus pacificus miR-42a 12 80
crm-miR-35g MIMAT0011605 Caenorhabditis remanei miR-35g 12 80
crm-miR-38 MIMAT0011603 Caenorhabditis remanei miR-38 12 80
crm-miR-42 MIMAT0011532 Caenorhabditis remanei miR-42 12 80
crm-miR-35f MIMAT0011514 Caenorhabditis remanei miR-35f 12 80
crm-miR-35e MIMAT0011513 Caenorhabditis remanei miR-35e 12 80
crm-miR-35d MIMAT0011739 Caenorhabditis remanei miR-35d 12 80
crm-miR-35c-3p MIMAT0011512 Caenorhabditis remanei miR-35c-3p 12 80
crm-miR-35b MIMAT0011511 Caenorhabditis remanei miR-35b 12 80
crm-miR-35a MIMAT0011510 Caenorhabditis remanei miR-35a 12 80
crm-miR-39 MIMAT0011506 Caenorhabditis remanei miR-39 12 80
crm-miR-40 MIMAT0011505 Caenorhabditis remanei miR-40 12 80
crm-miR-41 MIMAT0011504 Caenorhabditis remanei miR-41 12 80
cbr-miR-41b MIMAT0011489 Caenorhabditis briggsae miR-41b 12 80
cbr-miR-35b MIMAT0011483 Caenorhabditis briggsae miR-35b 12 80
cbr-miR-35d-3p MIMAT0011470 Caenorhabditis briggsae miR-35d-3p 12 80
cbr-miR-35e MIMAT0011468 Caenorhabditis briggsae miR-35e 12 80
cbr-miR-35c MIMAT0011467 Caenorhabditis briggsae miR-35c 12 80
sbi-miR397-3p MIMAT0020940 Sorghum bicolor miR397-3p 12 80
sme-miR-36c-3p MIMAT0011261 Schmidtea mediterranea miR-36c-3p 12 80
sme-miR-36b-3p MIMAT0011242 Schmidtea mediterranea miR-36b-3p 12 80
gga-miR-1689-3p MIMAT0007580 Gallus gallus miR-1689-3p 12 80
mmu-miR-181d-3p MIMAT0017264 Mus musculus miR-181d-3p 12 80
sme-miR-36a-3p MIMAT0003982 Schmidtea mediterranea miR-36a-3p 12 80
ppt-miR1220b MIMAT0004832 Physcomitrella patens miR1220b 12 80
ppt-miR1220a MIMAT0004831 Physcomitrella patens miR1220a 12 80
cbr-miR-41a MIMAT0001318 Caenorhabditis briggsae miR-41a 12 80
cbr-miR-40 MIMAT0001317 Caenorhabditis briggsae miR-40 12 80
cbr-miR-39 MIMAT0001316 Caenorhabditis briggsae miR-39 12 80
cbr-miR-38 MIMAT0001315 Caenorhabditis briggsae miR-38 12 80
cbr-miR-36 MIMAT0001314 Caenorhabditis briggsae miR-36 12 80
cbr-miR-35a MIMAT0001313 Caenorhabditis briggsae miR-35a 12 80
cbr-miR-42 MIMAT0000467 Caenorhabditis briggsae miR-42 12 80
cel-miR-42-3p MIMAT0000013 Caenorhabditis elegans miR-42-3p 12 80
cel-miR-41-3p MIMAT0000012 Caenorhabditis elegans miR-41-3p 12 80
cel-miR-40-3p MIMAT0000011 Caenorhabditis elegans miR-40-3p 12 80
cel-miR-39-3p MIMAT0000010 Caenorhabditis elegans miR-39-3p 12 80
cel-miR-38-3p MIMAT0000009 Caenorhabditis elegans miR-38-3p 12 80
cel-miR-37-3p MIMAT0000008 Caenorhabditis elegans miR-37-3p 12 80
cel-miR-36-3p MIMAT0000007 Caenorhabditis elegans miR-36-3p 12 80
cel-miR-35-3p MIMAT0000006 Caenorhabditis elegans miR-35-3p 12 80
>ppc-miR-8251-5p MIMAT0032968 Pristionchus pacificus miR-8251-5p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 accggtg 7
|||||||
Sbjct: 7 accggtg 1
>prd-miR-7968-3p MIMAT0030839 Panagrellus redivivus miR-7968-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 accggtg 7
|||||||
Sbjct: 7 accggtg 1
>ame-miR-3478 MIMAT0037302 Apis mellifera miR-3478
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ccggtg 7
||||||
Sbjct: 8 ccggtg 3
>tae-miR397-5p MIMAT0035795 Triticum aestivum miR397-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ccggtg 7
||||||
Sbjct: 7 ccggtg 2
>gsa-miR-36-3p MIMAT0035259 Gyrodactylus salaris miR-36-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ccggtg 7
||||||
Sbjct: 7 ccggtg 2
>efu-miR-582 MIMAT0035119 Eptesicus fuscus miR-582
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 accggt 6
||||||
Sbjct: 3 accggt 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 accggt 6
||||||
Sbjct: 8 accggt 3
>sma-miR-8457-3p MIMAT0033627 Schistosoma mansoni miR-8457-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ccggtg 7
||||||
Sbjct: 7 ccggtg 2
>sma-miR-8454-3p MIMAT0033621 Schistosoma mansoni miR-8454-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 accggt 6
||||||
Sbjct: 1 accggt 6
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 accggt 6
||||||
Sbjct: 6 accggt 1
>str-miR-37b-3p MIMAT0033467 Strongyloides ratti miR-37b-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ccggtg 7
||||||
Sbjct: 7 ccggtg 2
>str-miR-8393-3p MIMAT0033459 Strongyloides ratti miR-8393-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ccggtg 7
||||||
Sbjct: 7 ccggtg 2
>str-miR-37a-3p MIMAT0033455 Strongyloides ratti miR-37a-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ccggtg 7
||||||
Sbjct: 7 ccggtg 2
>str-miR-8392-3p MIMAT0033453 Strongyloides ratti miR-8392-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ccggtg 7
||||||
Sbjct: 8 ccggtg 3
>str-miR-40-3p MIMAT0033437 Strongyloides ratti miR-40-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ccggtg 7
||||||
Sbjct: 7 ccggtg 2
>str-miR-8386-3p MIMAT0033433 Strongyloides ratti miR-8386-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ccggtg 7
||||||
Sbjct: 8 ccggtg 3
>ppc-miR-2235a-9-3p MIMAT0033233 Pristionchus pacificus
miR-2235a-9-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ccggtg 7
||||||
Sbjct: 7 ccggtg 2
>ppc-miR-8283-3p MIMAT0033070 Pristionchus pacificus miR-8283-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ccggtg 7
||||||
Sbjct: 7 ccggtg 2
>ppc-miR-2235a-11-3p MIMAT0033034 Pristionchus pacificus
miR-2235a-11-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ccggtg 7
||||||
Sbjct: 7 ccggtg 2
>ppc-miR-2235a-10-3p MIMAT0033005 Pristionchus pacificus
miR-2235a-10-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ccggtg 7
||||||
Sbjct: 7 ccggtg 2
>ppc-miR-2235d-3p MIMAT0032953 Pristionchus pacificus
miR-2235d-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ccggtg 7
||||||
Sbjct: 7 ccggtg 2
>ppc-miR-2235c-3p MIMAT0032951 Pristionchus pacificus
miR-2235c-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ccggtg 7
||||||
Sbjct: 7 ccggtg 2
>ppc-miR-8243-5p MIMAT0032946 Pristionchus pacificus miR-8243-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ccggtg 7
||||||
Sbjct: 7 ccggtg 2
>ppc-miR-8232-3p MIMAT0032913 Pristionchus pacificus miR-8232-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ccggtg 7
||||||
Sbjct: 7 ccggtg 2
>ppc-miR-42c-3p MIMAT0032889 Pristionchus pacificus miR-42c-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ccggtg 7
||||||
Sbjct: 7 ccggtg 2
>ppc-miR-36-3p MIMAT0032883 Pristionchus pacificus miR-36-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ccggtg 7
||||||
Sbjct: 7 ccggtg 2
>ppc-miR-2235b-3p MIMAT0032851 Pristionchus pacificus
miR-2235b-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ccggtg 7
||||||
Sbjct: 7 ccggtg 2
>ath-miR8176 MIMAT0032775 Arabidopsis thaliana miR8176
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 ccggtg 7
||||||
Sbjct: 3 ccggtg 8
>ssa-miR-731-3p MIMAT0032683 Salmo salar miR-731-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ccggtg 7
||||||
Sbjct: 6 ccggtg 1
>bma-miR-36a MIMAT0031749 Brugia malayi miR-36a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ccggtg 7
||||||
Sbjct: 7 ccggtg 2
>prd-miR-39-3p MIMAT0030813 Panagrellus redivivus miR-39-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ccggtg 7
||||||
Sbjct: 7 ccggtg 2
>prd-miR-35a-3p MIMAT0030715 Panagrellus redivivus miR-35a-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ccggtg 7
||||||
Sbjct: 7 ccggtg 2
>prd-miR-40-3p MIMAT0030681 Panagrellus redivivus miR-40-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ccggtg 7
||||||
Sbjct: 7 ccggtg 2
>prd-miR-37-3p MIMAT0030567 Panagrellus redivivus miR-37-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ccggtg 7
||||||
Sbjct: 7 ccggtg 2
>prd-miR-7940b-3p MIMAT0030557 Panagrellus redivivus
miR-7940b-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ccggtg 7
||||||
Sbjct: 7 ccggtg 2
>prd-miR-35b-3p MIMAT0030511 Panagrellus redivivus miR-35b-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ccggtg 7
||||||
Sbjct: 7 ccggtg 2
>bdi-miR7775-5p MIMAT0030300 Brachypodium distachyon miR7775-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 accggt 6
||||||
Sbjct: 1 accggt 6
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 accggt 6
||||||
Sbjct: 6 accggt 1
>cbn-miR-35n MIMAT0029941 Caenorhabditis brenneri miR-35n
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ccggtg 7
||||||
Sbjct: 7 ccggtg 2
>cbn-miR-35m MIMAT0029940 Caenorhabditis brenneri miR-35m
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ccggtg 7
||||||
Sbjct: 7 ccggtg 2
>cbn-miR-35l MIMAT0029939 Caenorhabditis brenneri miR-35l
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ccggtg 7
||||||
Sbjct: 7 ccggtg 2
>cbn-miR-35k MIMAT0029938 Caenorhabditis brenneri miR-35k
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ccggtg 7
||||||
Sbjct: 7 ccggtg 2
>cbn-miR-35j MIMAT0029937 Caenorhabditis brenneri miR-35j
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ccggtg 7
||||||
Sbjct: 7 ccggtg 2
>cbn-miR-35i MIMAT0029936 Caenorhabditis brenneri miR-35i
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ccggtg 7
||||||
Sbjct: 7 ccggtg 2
>cbn-miR-35h MIMAT0029935 Caenorhabditis brenneri miR-35h
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ccggtg 7
||||||
Sbjct: 7 ccggtg 2
>cbn-miR-35g MIMAT0029934 Caenorhabditis brenneri miR-35g
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ccggtg 7
||||||
Sbjct: 7 ccggtg 2
>cbn-miR-35f MIMAT0029933 Caenorhabditis brenneri miR-35f
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ccggtg 7
||||||
Sbjct: 7 ccggtg 2
>cbn-miR-35e MIMAT0029932 Caenorhabditis brenneri miR-35e
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ccggtg 7
||||||
Sbjct: 7 ccggtg 2
>cbn-miR-35d MIMAT0029931 Caenorhabditis brenneri miR-35d
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ccggtg 7
||||||
Sbjct: 7 ccggtg 2
>cbn-miR-35c MIMAT0029930 Caenorhabditis brenneri miR-35c
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ccggtg 7
||||||
Sbjct: 7 ccggtg 2
>cbn-miR-35b MIMAT0029929 Caenorhabditis brenneri miR-35b
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ccggtg 7
||||||
Sbjct: 7 ccggtg 2
>cbn-miR-35a MIMAT0029928 Caenorhabditis brenneri miR-35a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ccggtg 7
||||||
Sbjct: 7 ccggtg 2
>cbn-miR-38 MIMAT0029926 Caenorhabditis brenneri miR-38
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ccggtg 7
||||||
Sbjct: 7 ccggtg 2
>cbn-miR-39 MIMAT0029925 Caenorhabditis brenneri miR-39
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ccggtg 7
||||||
Sbjct: 7 ccggtg 2
>crm-miR-35i MIMAT0029924 Caenorhabditis remanei miR-35i
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ccggtg 7
||||||
Sbjct: 7 ccggtg 2
>crm-miR-36 MIMAT0029921 Caenorhabditis remanei miR-36
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ccggtg 7
||||||
Sbjct: 7 ccggtg 2
>crm-miR-35h MIMAT0029920 Caenorhabditis remanei miR-35h
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ccggtg 7
||||||
Sbjct: 7 ccggtg 2
>cbr-miR-35g MIMAT0029919 Caenorhabditis briggsae miR-35g
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ccggtg 7
||||||
Sbjct: 7 ccggtg 2
>cbr-miR-35f MIMAT0029918 Caenorhabditis briggsae miR-35f
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ccggtg 7
||||||
Sbjct: 7 ccggtg 2
>lja-miR7523b MIMAT0029339 Lotus japonicus miR7523b
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ccggtg 7
||||||
Sbjct: 8 ccggtg 3
>lja-miR7523a MIMAT0029338 Lotus japonicus miR7523a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ccggtg 7
||||||
Sbjct: 8 ccggtg 3
>ssc-miR-582 MIMAT0025380 Sus scrofa miR-582
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 accggt 6
||||||
Sbjct: 3 accggt 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 accggt 6
||||||
Sbjct: 8 accggt 3
>mja-miR-6489-5p MIMAT0025296 Marsupenaeus japonicus miR-6489-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ccggtg 7
||||||
Sbjct: 8 ccggtg 3
>cgr-miR-181d-3p MIMAT0023804 Cricetulus griseus miR-181d-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ccggtg 7
||||||
Sbjct: 8 ccggtg 3
>hco-miR-40a MIMAT0023444 Haemonchus contortus miR-40a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ccggtg 7
||||||
Sbjct: 7 ccggtg 2
>hco-miR-40d MIMAT0023430 Haemonchus contortus miR-40d
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ccggtg 7
||||||
Sbjct: 7 ccggtg 2
>hco-miR-40c MIMAT0023429 Haemonchus contortus miR-40c
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ccggtg 7
||||||
Sbjct: 7 ccggtg 2
>hco-miR-40b MIMAT0023323 Haemonchus contortus miR-40b
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ccggtg 7
||||||
Sbjct: 7 ccggtg 2
>tur-miR-5730-5p MIMAT0023050 Tetranychus urticae miR-5730-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ccggtg 7
||||||
Sbjct: 7 ccggtg 2
>asu-miR-5348-3p MIMAT0021549 Ascaris suum miR-5348-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ccggtg 7
||||||
Sbjct: 7 ccggtg 2
>asu-miR-36f-3p MIMAT0021547 Ascaris suum miR-36f-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ccggtg 7
||||||
Sbjct: 7 ccggtg 2
>asu-miR-36e-3p MIMAT0021448 Ascaris suum miR-36e-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ccggtg 7
||||||
Sbjct: 7 ccggtg 2
>asu-miR-36d-3p MIMAT0021446 Ascaris suum miR-36d-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ccggtg 7
||||||
Sbjct: 7 ccggtg 2
>asu-miR-36c-3p MIMAT0021444 Ascaris suum miR-36c-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ccggtg 7
||||||
Sbjct: 7 ccggtg 2
>asu-miR-36b-3p MIMAT0021442 Ascaris suum miR-36b-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ccggtg 7
||||||
Sbjct: 7 ccggtg 2
>asu-miR-36a-3p MIMAT0021440 Ascaris suum miR-36a-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ccggtg 7
||||||
Sbjct: 7 ccggtg 2
>rmi-miR-5316b MIMAT0021388 Rhipicephalus microplus miR-5316b
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ccggtg 7
||||||
Sbjct: 7 ccggtg 2
>rmi-miR-5316a MIMAT0021387 Rhipicephalus microplus miR-5316a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ccggtg 7
||||||
Sbjct: 7 ccggtg 2
>gma-miR169i-3p MIMAT0021068 Glycine max miR169i-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 ccggtg 7
||||||
Sbjct: 1 ccggtg 6
>ath-miR5027 MIMAT0020533 Arabidopsis thaliana miR5027
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 accggt 6
||||||
Sbjct: 1 accggt 6
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 accggt 6
||||||
Sbjct: 6 accggt 1
>hsa-miR-4783-3p MIMAT0019947 Homo sapiens miR-4783-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 ccggtg 7
||||||
Sbjct: 3 ccggtg 8
>hsa-miR-4655-5p MIMAT0019721 Homo sapiens miR-4655-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ccggtg 7
||||||
Sbjct: 6 ccggtg 1
>tca-miR-3791-3p MIMAT0018883 Tribolium castaneum miR-3791-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ccggtg 7
||||||
Sbjct: 7 ccggtg 2
>ame-miR-3791 MIMAT0018570 Apis mellifera miR-3791
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ccggtg 7
||||||
Sbjct: 7 ccggtg 2
>rlcv-miR-rL1-35-5p MIMAT0016962 Rhesus lymphocryptovirus
miR-rL1-35-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ccggtg 7
||||||
Sbjct: 6 ccggtg 1
>bma-miR-36b MIMAT0014103 Brugia malayi miR-36b
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ccggtg 7
||||||
Sbjct: 7 ccggtg 2
>bma-miR-36c MIMAT0014102 Brugia malayi miR-36c
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ccggtg 7
||||||
Sbjct: 7 ccggtg 2
>rlcv-miR-rL1-30-5p MIMAT0019195 Rhesus lymphocryptovirus
miR-rL1-30-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 accggt 6
||||||
Sbjct: 1 accggt 6
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 accggt 6
||||||
Sbjct: 6 accggt 1
>eca-miR-582-3p MIMAT0013104 Equus caballus miR-582-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 accggt 6
||||||
Sbjct: 3 accggt 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 accggt 6
||||||
Sbjct: 8 accggt 3
>hvt-miR-H7-3p MIMAT0012719 Herpesvirus of miR-H7-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 accggt 6
||||||
Sbjct: 1 accggt 6
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 accggt 6
||||||
Sbjct: 6 accggt 1
>cte-miR-36 MIMAT0013530 Capitella teleta miR-36
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ccggtg 7
||||||
Sbjct: 7 ccggtg 2
>ppc-miR-2251a MIMAT0011720 Pristionchus pacificus miR-2251a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ccggtg 7
||||||
Sbjct: 7 ccggtg 2
>ppc-miR-38 MIMAT0011714 Pristionchus pacificus miR-38
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ccggtg 7
||||||
Sbjct: 7 ccggtg 2
>ppc-miR-2240a MIMAT0011690 Pristionchus pacificus miR-2240a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ccggtg 7
||||||
Sbjct: 7 ccggtg 2
>ppc-miR-2235a-3p MIMAT0011681 Pristionchus pacificus
miR-2235a-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ccggtg 7
||||||
Sbjct: 7 ccggtg 2
>ppc-miR-42b MIMAT0011654 Pristionchus pacificus miR-42b
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ccggtg 7
||||||
Sbjct: 7 ccggtg 2
>ppc-miR-37 MIMAT0011647 Pristionchus pacificus miR-37
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ccggtg 7
||||||
Sbjct: 7 ccggtg 2
>ppc-miR-42a MIMAT0011641 Pristionchus pacificus miR-42a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ccggtg 7
||||||
Sbjct: 7 ccggtg 2
>crm-miR-35g MIMAT0011605 Caenorhabditis remanei miR-35g
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ccggtg 7
||||||
Sbjct: 7 ccggtg 2
>crm-miR-38 MIMAT0011603 Caenorhabditis remanei miR-38
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ccggtg 7
||||||
Sbjct: 7 ccggtg 2
>crm-miR-42 MIMAT0011532 Caenorhabditis remanei miR-42
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ccggtg 7
||||||
Sbjct: 7 ccggtg 2
>crm-miR-35f MIMAT0011514 Caenorhabditis remanei miR-35f
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ccggtg 7
||||||
Sbjct: 7 ccggtg 2
>crm-miR-35e MIMAT0011513 Caenorhabditis remanei miR-35e
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ccggtg 7
||||||
Sbjct: 7 ccggtg 2
>crm-miR-35d MIMAT0011739 Caenorhabditis remanei miR-35d
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ccggtg 7
||||||
Sbjct: 7 ccggtg 2
>crm-miR-35c-3p MIMAT0011512 Caenorhabditis remanei miR-35c-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ccggtg 7
||||||
Sbjct: 7 ccggtg 2
>crm-miR-35b MIMAT0011511 Caenorhabditis remanei miR-35b
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ccggtg 7
||||||
Sbjct: 7 ccggtg 2
>crm-miR-35a MIMAT0011510 Caenorhabditis remanei miR-35a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ccggtg 7
||||||
Sbjct: 7 ccggtg 2
>crm-miR-39 MIMAT0011506 Caenorhabditis remanei miR-39
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ccggtg 7
||||||
Sbjct: 7 ccggtg 2
>crm-miR-40 MIMAT0011505 Caenorhabditis remanei miR-40
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ccggtg 7
||||||
Sbjct: 7 ccggtg 2
>crm-miR-41 MIMAT0011504 Caenorhabditis remanei miR-41
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ccggtg 7
||||||
Sbjct: 7 ccggtg 2
>cbr-miR-41b MIMAT0011489 Caenorhabditis briggsae miR-41b
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ccggtg 7
||||||
Sbjct: 7 ccggtg 2
>cbr-miR-35b MIMAT0011483 Caenorhabditis briggsae miR-35b
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ccggtg 7
||||||
Sbjct: 7 ccggtg 2
>cbr-miR-35d-3p MIMAT0011470 Caenorhabditis briggsae miR-35d-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ccggtg 7
||||||
Sbjct: 7 ccggtg 2
>cbr-miR-35e MIMAT0011468 Caenorhabditis briggsae miR-35e
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ccggtg 7
||||||
Sbjct: 7 ccggtg 2
>cbr-miR-35c MIMAT0011467 Caenorhabditis briggsae miR-35c
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ccggtg 7
||||||
Sbjct: 7 ccggtg 2
>sbi-miR397-3p MIMAT0020940 Sorghum bicolor miR397-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ccggtg 7
||||||
Sbjct: 7 ccggtg 2
>sme-miR-36c-3p MIMAT0011261 Schmidtea mediterranea miR-36c-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ccggtg 7
||||||
Sbjct: 7 ccggtg 2
>sme-miR-36b-3p MIMAT0011242 Schmidtea mediterranea miR-36b-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ccggtg 7
||||||
Sbjct: 7 ccggtg 2
>gga-miR-1689-3p MIMAT0007580 Gallus gallus miR-1689-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 ccggtg 7
||||||
Sbjct: 1 ccggtg 6
>mmu-miR-181d-3p MIMAT0017264 Mus musculus miR-181d-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ccggtg 7
||||||
Sbjct: 8 ccggtg 3
>sme-miR-36a-3p MIMAT0003982 Schmidtea mediterranea miR-36a-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ccggtg 7
||||||
Sbjct: 7 ccggtg 2
>ppt-miR1220b MIMAT0004832 Physcomitrella patens miR1220b
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 ccggtg 7
||||||
Sbjct: 3 ccggtg 8
>ppt-miR1220a MIMAT0004831 Physcomitrella patens miR1220a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 ccggtg 7
||||||
Sbjct: 3 ccggtg 8
>cbr-miR-41a MIMAT0001318 Caenorhabditis briggsae miR-41a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ccggtg 7
||||||
Sbjct: 7 ccggtg 2
>cbr-miR-40 MIMAT0001317 Caenorhabditis briggsae miR-40
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ccggtg 7
||||||
Sbjct: 7 ccggtg 2
>cbr-miR-39 MIMAT0001316 Caenorhabditis briggsae miR-39
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ccggtg 7
||||||
Sbjct: 7 ccggtg 2
>cbr-miR-38 MIMAT0001315 Caenorhabditis briggsae miR-38
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ccggtg 7
||||||
Sbjct: 7 ccggtg 2
>cbr-miR-36 MIMAT0001314 Caenorhabditis briggsae miR-36
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ccggtg 7
||||||
Sbjct: 7 ccggtg 2
>cbr-miR-35a MIMAT0001313 Caenorhabditis briggsae miR-35a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ccggtg 7
||||||
Sbjct: 7 ccggtg 2
>cbr-miR-42 MIMAT0000467 Caenorhabditis briggsae miR-42
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ccggtg 7
||||||
Sbjct: 6 ccggtg 1
>cel-miR-42-3p MIMAT0000013 Caenorhabditis elegans miR-42-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ccggtg 7
||||||
Sbjct: 7 ccggtg 2
>cel-miR-41-3p MIMAT0000012 Caenorhabditis elegans miR-41-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ccggtg 7
||||||
Sbjct: 7 ccggtg 2
>cel-miR-40-3p MIMAT0000011 Caenorhabditis elegans miR-40-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ccggtg 7
||||||
Sbjct: 7 ccggtg 2
>cel-miR-39-3p MIMAT0000010 Caenorhabditis elegans miR-39-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ccggtg 7
||||||
Sbjct: 7 ccggtg 2
>cel-miR-38-3p MIMAT0000009 Caenorhabditis elegans miR-38-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ccggtg 7
||||||
Sbjct: 7 ccggtg 2
>cel-miR-37-3p MIMAT0000008 Caenorhabditis elegans miR-37-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ccggtg 7
||||||
Sbjct: 7 ccggtg 2
>cel-miR-36-3p MIMAT0000007 Caenorhabditis elegans miR-36-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ccggtg 7
||||||
Sbjct: 7 ccggtg 2
>cel-miR-35-3p MIMAT0000006 Caenorhabditis elegans miR-35-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ccggtg 7
||||||
Sbjct: 7 ccggtg 2
Database: /home/users/abid/BLAST/MIRBASE
Posted date: Sep 2, 2014 3:58 PM
Number of letters in database: 286,624
Number of sequences in database: 35,828
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 35828
Number of Hits to DB: 157
Number of extensions: 155
Number of successful extensions: 143
Number of sequences better than 100.0: 135
Number of HSP's gapped: 143
Number of HSP's successfully gapped: 143
Length of query: 7
Length of database: 286,624
Length adjustment: 4
Effective length of query: 3
Effective length of database: 143,312
Effective search space: 429936
Effective search space used: 429936
X1: 5 ( 9.9 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 5 (10.4 bits)
S2: 6 (12.4 bits)
